[Test] Build failed in Jenkins: EinsteinToolkitDoc #911

Sun Jul 26 15:51:06 CDT 2020

See <https://build.barrywardell.net/job/EinsteinToolkitDoc/911/display/redirect>

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Submodule 'arrangements/ExternalLibraries/MPI' (https://github.com/einsteintoolkit/ExternalLibraries-MPI.git) registered for path 'arrangements/ExternalLibraries/MPI'
Submodule 'arrangements/ExternalLibraries/OpenBLAS' (https://github.com/einsteintoolkit/ExternalLibraries-OpenBLAS.git) registered for path 'arrangements/ExternalLibraries/OpenBLAS'
Submodule 'arrangements/ExternalLibraries/OpenCL' (https://github.com/einsteintoolkit/ExternalLibraries-OpenCL.git) registered for path 'arrangements/ExternalLibraries/OpenCL'
Submodule 'arrangements/ExternalLibraries/OpenSSL' (https://github.com/einsteintoolkit/ExternalLibraries-OpenSSL.git) registered for path 'arrangements/ExternalLibraries/OpenSSL'
Submodule 'arrangements/ExternalLibraries/PAPI' (https://github.com/einsteintoolkit/ExternalLibraries-PAPI.git) registered for path 'arrangements/ExternalLibraries/PAPI'
Submodule 'arrangements/ExternalLibraries/PETSc' (https://github.com/einsteintoolkit/ExternalLibraries-PETSc.git) registered for path 'arrangements/ExternalLibraries/PETSc'
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Entering 'arrangements/CTThorns'
HEAD is now at 8fae77a CT_Analytic: regenerate using Kranc e69182c
Entering 'arrangements/CactusBase'
HEAD is now at f54e0f4 Boundary: code cleanup
Entering 'arrangements/CactusConnect'
HEAD is now at ed05d31 HTTPD: check HAVE_CAPABILITY_PTHREADS instad of CCTK_PTHREADS
Entering 'arrangements/CactusDoc/CoreDoc'
HEAD is now at 2c601ef add *.ccl files and src/make.code.defn
Entering 'arrangements/CactusElliptic'
HEAD is now at daeeadc EllBase: fix handling of 64bit Fortran string lengths
Entering 'arrangements/CactusExamples'
HEAD is now at 8b4871d WaveMoL: remove explicit include of cctk_Arguments_Checked
Entering 'arrangements/CactusIO'
HEAD is now at cb8c7d2 IOJpeg: Handle CCTK_INT!=int
Entering 'arrangements/CactusNumerical'
HEAD is now at 4ad768f3 MoL: add missing break for RK4-MR-2-1
Entering 'arrangements/CactusPUGH'
HEAD is now at 1df75fd PUGH: Initialize new cGH fields ���cctk_alignment��� and ���cctk_alignment_offset���
Entering 'arrangements/CactusPUGHIO'
HEAD is now at 63f958b IOHDF5: update checkpoint file after WaveToyC SYNC update
Entering 'arrangements/CactusTest'
HEAD is now at 02b4a50 TestReduce: work around F77 compilers checking subroutine argument lists
Entering 'arrangements/CactusUtils'
HEAD is now at f13cf83 Vectors: support presync build
Entering 'arrangements/CactusWave'
HEAD is now at b6551b1 IDScalarWaveC: make compile in absense of presync
Entering 'arrangements/EinsteinAnalysis'
HEAD is now at 3df424fa EHFinder: explicitly convert void* pointers to addresses
Entering 'arrangements/EinsteinBase'
HEAD is now at 9ea098c Fixes issue https://bitbucket.org/einsteintoolkit/tickets/issues/2424/tmunubase-depends-on-exact
Entering 'arrangements/EinsteinEOS'
HEAD is now at d0b8289 EOS_Omni: account for difference between scalars and 1-element arrays
Entering 'arrangements/EinsteinEvolve'
HEAD is now at 425380c GRHydro: do not write parfile in test
Entering 'arrangements/EinsteinExamples'
HEAD is now at 9c2c27a tov: add SystemTopology
Entering 'arrangements/EinsteinUtils'
HEAD is now at aabd1ed SetMask_SphericalSurface: add ParamCheck routine
Entering 'arrangements/ExternalLibraries/BLAS'
HEAD is now at 22ffa3c BLAS: use bash_utils.sh to search for library
Entering 'arrangements/ExternalLibraries/FFTW3'
HEAD is now at bc2d214 Added thorn documentation with notes on possibility for location stripping
Entering 'arrangements/ExternalLibraries/GSL'
HEAD is now at 2c76b3e Prevent accidental library builds
Entering 'arrangements/ExternalLibraries/HDF5'
HEAD is now at 462fce2 HDF5: update included tarball to 1.12
Entering 'arrangements/ExternalLibraries/LAPACK'
HEAD is now at 4e216f4 LAPACK: use bash_utils.sh to search for library
Entering 'arrangements/ExternalLibraries/LORENE'
HEAD is now at d982610 LORENE: remove manual handling of OpenMP flags
Entering 'arrangements/ExternalLibraries/MPI'
HEAD is now at 8e7f753 MPI: enable MPI-1 compatibility
Entering 'arrangements/ExternalLibraries/OpenBLAS'
HEAD is now at cf871fc Update to version 0.2.19
Entering 'arrangements/ExternalLibraries/OpenCL'
HEAD is now at 23c9ebc Support Cygwin
Entering 'arrangements/ExternalLibraries/OpenSSL'
HEAD is now at 80db32c Support Cygwin
Entering 'arrangements/ExternalLibraries/PAPI'
HEAD is now at 18a95d5 PAPI: update tarball to 6.0.0.1
Entering 'arrangements/ExternalLibraries/PETSc'
HEAD is now at 89b5ec9 PETSc: use directory containing mpi.h as MPI_INC_DIRS
Entering 'arrangements/ExternalLibraries/hwloc'
HEAD is now at 87454be hwloc: do not use X11 or OpenGL
Entering 'arrangements/ExternalLibraries/libjpeg'
HEAD is now at 36262f2 libjpeg: use bash_utils.sh to find library
Entering 'arrangements/ExternalLibraries/pciutils'
HEAD is now at ad7ec08 pciutils: remove unused patch files
Entering 'arrangements/ExternalLibraries/pthreads'
HEAD is now at 824b838 add more architectures: lib/i386-linux-gnu lib/arm-linux-gnueabihf
Entering 'arrangements/ExternalLibraries/zlib'
HEAD is now at dc4a17a Support Cygwin
Entering 'arrangements/Lean'
HEAD is now at 1e8b881 add README
Entering 'arrangements/Llama'
HEAD is now at 7ee5cca Interpolate2: try ensuring that functions are properly nested
Entering 'arrangements/Numerical'
HEAD is now at 273e500 AEILocalInterp: Replace deprecated use of finite with isfinite
Entering 'arrangements/PITTNullCode'
HEAD is now at aa4c4f9 NullEvolve: specify correct type when USEing Cactus parameters
Entering 'arrangements/Proca'
HEAD is now at ca2876b manifest: add bib files with required citations
Entering 'arrangements/WVUThorns'
HEAD is now at b826f65 ID_converter_GiRaFFE: use correct type when USEing parameters
Entering 'arrangements/WVUThorns_Diagnostics'
HEAD is now at 052fb20 WVUThorns_Diagnostics/VolumeIntegrals_GRMHD/param.ccl: Increase the default Gamma speed limit and add description.
Entering 'flesh'
HEAD is now at 1e362daf Cactus: skip trying to find intrinsic module files
Entering 'manifest'
HEAD is now at df8c256 Revert "einsteintoolkit.th: remove ADMCoupling"
Entering 'repos/CRL'
HEAD is now at ccc00de GetComponents: ignore git:// transport when creating canonical URL
Entering 'repos/EinsteinExact'
HEAD is now at 0d400ba EinsteinExact: regenerate code using Kranc 021de75ba461eaeace4ccbd738e6b2a88367bcbb
Entering 'repos/EinsteinInitialData'
HEAD is now at 8cdd934c Exact: remove archive copy of source file
Entering 'repos/Kranc'
HEAD is now at e69182c generate READS statement for stress_energy_state if needed
Entering 'repos/McLachlan'
HEAD is now at c5cb2ff0 ML_CCZ4_Helper: regenerate code
Entering 'repos/ReadInterpolate'
HEAD is now at a3cfcc9 ReadInterpolate: use CCTK_VWARN etc macros
Entering 'repos/carpet'
HEAD is now at e562bfcc CarpetLib: Use original spatial prolongation order for op_copy
Entering 'simfactory'
HEAD is now at 2c7baa92 comet: manually choose sensible thread binding in ibrun
Entering 'utils'
HEAD is now at 362c8b2 MakeThornList: remove duplicate thorns from multiple parfiles
make: pdf2ps: Command not found
make: *** [Makefile:1040: doc/UsersGuide/bincactus2.ps] Error 127
Build step 'Execute shell' marked build as failure
Archiving artifacts