[ET Trac] [Einstein Toolkit] #1483: speed up reading metadata of HDF5 files in visit

Einstein Toolkit trac-noreply at einsteintoolkit.org
Wed Nov 20 21:05:35 CST 2013


#1483: speed up reading metadata of HDF5 files in visit
--------------------------+-------------------------------------------------
  Reporter:  rhaas        |       Owner:                     
      Type:  enhancement  |      Status:  review             
  Priority:  minor        |   Milestone:                     
 Component:  Other        |     Version:  development version
Resolution:               |    Keywords:  CarpetHDF5         
--------------------------+-------------------------------------------------

Comment (by rhaas):

 I made up some test using a file with very many (~400k) datasets (9.2GB
 which does not quite fit into main memory). I give times to iterate over
 the file and read the metadata (using gettimeofday):

 With patch and without index files: 26s
 With patch and with index files: 18s
 Without patch and without index files: 27s
 Without patch and with index files: 19s

 Doing the same with a large 3d dataset (~16GB) I find:

 With patch and without index files: 12s
 With patch and with index files: 10s
 Without patch and without index files: 12s
 Without patch and with index files: 10s

 So ti seems as if this has not measurable impact in speed (index files
 however help). This would mean that there is no need (anymore?) to try and
 parse information out of the dataset name and one can just query the
 attributes.

-- 
Ticket URL: <https://trac.einsteintoolkit.org/ticket/1483#comment:3>
Einstein Toolkit <http://einsteintoolkit.org>
The Einstein Toolkit


More information about the Trac mailing list