[ET Trac] [Einstein Toolkit] #1668: Cannot compile the ET on Datura
Einstein Toolkit
trac-noreply at einsteintoolkit.org
Mon Oct 6 16:38:02 CDT 2014
#1668: Cannot compile the ET on Datura
----------------------+-----------------------------------------------------
Reporter: hinder | Owner:
Type: defect | Status: new
Priority: critical | Milestone:
Component: Other | Version: development version
Keywords: |
----------------------+-----------------------------------------------------
Compilation of the ET fails on Datura while configuring MPI (see also
#1667). When running the mpic++ command directly, I get
{{{
[ianhin at login-damiana EinsteinToolkitGit]$
/cluster/openmpi/SL6/1.7.2/intel14/bin/mpic++
/cluster/openmpi/SL6/1.7.2/intel14/bin/mpic++: error while loading shared
libraries: libimf.so: cannot open shared object file: No such file or
directory
}}}
This happens because the compiler library is not on LD_LIBRARY_PATH:
{{{
[ianhin at login-damiana EinsteinToolkitGit]$ ldd
/cluster/openmpi/SL6/1.7.2/intel14/bin/mpic++
linux-vdso.so.1 => (0x00007fff2a1ff000)
libopen-pal.so.5 => /cluster/openmpi/SL6/1.7.2/intel14/lib
/libopen-pal.so.5 (0x00007fc755f21000)
libm.so.6 => /lib64/libm.so.6 (0x00007fc755c90000)
libdl.so.2 => /lib64/libdl.so.2 (0x00007fc755a8c000)
librt.so.1 => /lib64/librt.so.1 (0x00007fc755884000)
libnsl.so.1 => /lib64/libnsl.so.1 (0x00007fc75566a000)
libutil.so.1 => /lib64/libutil.so.1 (0x00007fc755467000)
libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007fc755251000)
libpthread.so.0 => /lib64/libpthread.so.0 (0x00007fc755033000)
libc.so.6 => /lib64/libc.so.6 (0x00007fc754ca0000)
/lib64/ld-linux-x86-64.so.2 (0x00007fc75620e000)
libimf.so => not found
libsvml.so => not found
libirng.so => not found
libintlc.so.5 => not found
}}}
because when OpenMPI was compiled, its rpath was not set to point to the
compiler installation directory.
This is because the compiler module is not loaded. The reason it is not
loaded in the envsetup for the machine is that this this is specific to
the version of the compiler, and one might want to use a different
compiler via a different optionlist.
Since the optionlist is the only place for compiler-specific options, how
can I set LD_LIBRARY_PATH so that mpicxx can run?
As a last resort, I suppose I can set all the required MPI variables in
the optionlist, but MPI_DIR used to work with the old configure script. I
would like it to work again now.
--
Ticket URL: <https://trac.einsteintoolkit.org/ticket/1668>
Einstein Toolkit <http://einsteintoolkit.org>
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