[ET Trac] #2837: Building the Einstein Toolkit

Suo-Ning Wang trac-noreply at einsteintoolkit.org
Tue Dec 17 02:32:21 CST 2024


#2837: Building the Einstein Toolkit

 Reporter: Suo-Ning Wang
   Status: open
Milestone: 
  Version: 
     Type: bug
 Priority: major
Component: 

Comment (by Suo-Ning Wang):

Using configuration: sim  
Building sim  
if test ! -f "/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data/cctk\_Config.h" ; then \\  
  	echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\  
  echo "Cactus - version: 4.17.0";\\  
          if test "x"yes"" = 'xno'; then\\  
            if \(!  perl -s lib/make/setup\_configuration.pl  sim\) ; then \\  
              echo "" ;                                                        \\  
              echo "Error reconfiguring configuration sim" ;                    \\  
              rm -f "/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data/cctk\_Config.h" ;            \\  
              exit 2 ;                                                         \\  
            fi                                                                 \\  
          else                                                                 \\  
    echo "Error: Configuration sim is incomplete.";\\  
    echo "Please check the files in /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data for error messages.";\\  
    echo "You can try again to configure using make sim-config";\\  
    echo "or delete this configuration with make sim-delete.";\\  
    	echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\  
    exit 1; \\  
          fi                                                                 \\  
fi  
if \(perl -e 'exit \(\(stat shift\)\[9\] > \(stat shift\)\[9\]\)' /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-info /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/force-reconfigure\); then    \\  
  	echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\  
  echo "Cactus - version: 4.17.0";\\  
  echo "Error: Configuration sim is out of date.";\\  
  echo "  Please reconfigure your configuration by running the command"; \\  
          echo ;\\  
          echo "    make sim-reconfig"; \\  
          echo ;\\  
  echo "  \(It is likely that recent changes to the flesh require this.\)";\\  
  	echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\  
  exit 1;\\  
fi  
if test "x0" = "x0" ; then \\  
  	echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\  
  echo "Cactus - version: 4.17.0"; \\  
  echo "Building configuration sim"; \\  
  	echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\  
fi

---

Cactus - version: 4.17.0  
Building configuration sim

---

make -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.configuration TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CCTK\_HOME=/labshare/users\_team/suoning/新建文件夹/Cactus  rebuild  
make\[1\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus”  
make\[1\]: 对“rebuild”无需做任何事。  
make\[1\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus”  
make -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.configuration TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CCTK\_HOME=/labshare/users\_team/suoning/新建文件夹/Cactus  
make\[1\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus”  
Checking status of thorn zlib

---

make\[2\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib”  
if \[ ! -d ./ \] ; then mkdir -p ./ ; fi  
cd ./ ; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/zlib/src THORN=zlib USESTHORNS="" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib”  
make\[3\]: “make.checked”已是最新。  
make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib”  
cd cctk\_Bindings; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/zlib THORN=zlib USESTHORNS="" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib/cctk\_Bindings”  
make\[3\]: “make.checked”已是最新。  
make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib/cctk\_Bindings”  
make\[2\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib”  
echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_

---

Checking status of thorn hwloc

---

make\[2\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
if \[ ! -d ./ \] ; then mkdir -p ./ ; fi  
echo CCTK\_THIS\_SUBDIR := ./ > make.identity  
if \[ ! -d cctk\_Bindings/ \] ; then mkdir -p cctk\_Bindings/ ; fi  
echo CCTK\_THIS\_SUBDIR := cctk\_Bindings/ > cctk\_Bindings/make.identity  
if \[ ! -d ./ \] ; then mkdir -p ./ ; fi  
cd ./ ; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src THORN=hwloc USESTHORNS="zlib" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
gcc -E -M  -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -DHWLOC\_UTILPATH='/labshare/users\_team/suoning/新建文件夹/Cactus/exe/sim'    -DHWLOC\_VERSION\_PKGCONFIG='"2.10.0"'   /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc"  -DCCODE > version.c.d  
perl -pi -e 's\{^\\s\*\\Qversion.o\\E\\s\*:\}\{version.c.o version.c.d:\}; s\{\\s\+\\S\*[/\\\\](CParameterStructNames%5C.h)\\b\}\{\}g' version.c.d  
1734423130\.93969 Preprocessing /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c  
\{ if test no = 'yes'; then echo '#line 1 "'/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c'"'; fi; cat /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c; \} | perl -s /labshare/users\_team/suoning/新建文件夹/Cactus/lib/sbin/c\_file\_processor.pl -line\_directives=no -source\_file\_name=/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data > version.c  
1734423130\.98201 Compiling /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c  
current\_wd=`pwd` ; cd /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/scratch ; gcc  -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -DHWLOC\_UTILPATH='/labshare/users\_team/suoning/新建文件夹/Cactus/exe/sim'    -DHWLOC\_VERSION\_PKGCONFIG='"2.10.0"'   -c -o $current\_wd/version.c.o $current\_wd/version.c -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc"  -DCCODE  
1734423131\.14617 Postprocessing /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c

---

echo "" > make.checked  
make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
cd cctk\_Bindings; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc THORN=hwloc USESTHORNS="zlib" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc/cctk\_Bindings”  
gcc -E -M  -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc"  -DCCODE > cctk\_ThornBindings.c.d  
perl -pi -e 's\{^\\s\*\\Qcctk\_ThornBindings.o\\E\\s\*:\}\{cctk\_ThornBindings.c.o cctk\_ThornBindings.c.d:\}; s\{\\s\+\\S\*[/\\\\](CParameterStructNames%5C.h)\\b\}\{\}g' cctk\_ThornBindings.c.d  
1734423131\.36676 Preprocessing /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c  
\{ if test no = 'yes'; then echo '#line 1 "'/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c'"'; fi; cat /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c; \} | perl -s /labshare/users\_team/suoning/新建文件夹/Cactus/lib/sbin/c\_file\_processor.pl -line\_directives=no -source\_file\_name=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data > cctk\_ThornBindings.c  
1734423131\.3964 Compiling /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c  
current\_wd=`pwd` ; cd /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/scratch ; gcc  -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -c -o $current\_wd/cctk\_ThornBindings.c.o $current\_wd/cctk\_ThornBindings.c -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc"  -DCCODE  
1734423131\.49924 Postprocessing /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c

---

echo "" > make.checked  
make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc/cctk\_Bindings”  
if \[ -r /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a \] ; then echo Updating /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a ; else echo Creating /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a ; fi  
Creating /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a  
rm -f /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a  
make -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.thornlib /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a.objectlist  
make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
echo .[//version.c.o](//version.c.o) cctk\_Bindings//cctk\_ThornBindings.c.o > /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a.objectlist  
make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
xargs -n 10000 ar rcs /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a < /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a.objectlist  
if test "xno" = "xyes" ; then ranlib -cs /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a ; fi  
echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_

---

make\[2\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_

---

Checking status of thorn MPI

---

make\[2\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI”  
if \[ ! -d ./ \] ; then mkdir -p ./ ; fi  
echo CCTK\_THIS\_SUBDIR := ./ > make.identity  
if \[ ! -d cctk\_Bindings/ \] ; then mkdir -p cctk\_Bindings/ ; fi  
echo CCTK\_THIS\_SUBDIR := cctk\_Bindings/ > cctk\_Bindings/make.identity  
if \[ ! -d ./ \] ; then mkdir -p ./ ; fi  
cd ./ ; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/MPI/src THORN=MPI USESTHORNS="hwloc" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI”  
echo "" > make.checked  
make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI”  
cd cctk\_Bindings; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/MPI THORN=MPI USESTHORNS="hwloc" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/conf

--
Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-einstein-toolkit
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