<html>#2598: thornyflat - production run segmentation fault
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<tr><td style='text-align:right'> Reporter:</td><td>Maria</td></tr>
<tr><td style='text-align:right'> Status:</td><td>new</td></tr>
<tr><td style='text-align:right'>Milestone:</td><td></td></tr>
<tr><td style='text-align:right'> Version:</td><td>ET_2021_11</td></tr>
<tr><td style='text-align:right'> Type:</td><td>bug</td></tr>
<tr><td style='text-align:right'> Priority:</td><td>major</td></tr>
<tr><td style='text-align:right'>Component:</td><td></td></tr>
</table>
<p>Simfactory scripts for ThornyFlat give segmentation fault in production run. I am attaching the cfg, ini, run and sub scripts. </p>
<p>In the simulations directory, the SIMFACTORY directory does not have inside the subdirectories: exe, cfg, run and par and NODES is empty. The only file is the properties.ini, which includes:</p>
<p>____</p>
<p>Loading torque version 6.1.3 : dev/torque/6.1.3</p>
<p>Loading openmpi version 4.1.2_gcc112 : parallel/openmpi/4.1.2_gcc112</p>
<p>Loading openblas version 0.3.19_gcc112 : libs/openblas/0.3.19_gcc112</p>
<p>+ set -e</p>
<p>+ cd /scratch/mbh0012/simulations/bnsG2/output-0000-active</p>
<p>+ echo Checking:</p>
<p>+ pwd</p>
<p>+ hostname</p>
<p>+ date</p>
<p>+ cat</p>
<p>+ echo Environment:</p>
<p>+ export GMON_OUT_PREFIX=gmon.out</p>
<p>+ GMON_OUT_PREFIX=gmon.out</p>
<p>+ export CACTUS_NUM_PROCS=2</p>
<p>+ CACTUS_NUM_PROCS=2</p>
<p>+ export CACTUS_NUM_THREADS=20</p>
<p>+ CACTUS_NUM_THREADS=20</p>
<p>+ export OMP_NUM_THREADS=20</p>
<p>+ OMP_NUM_THREADS=20</p>
<p>+ env</p>
<p>+ sort</p>
<p>+ echo Starting:</p>
<p>++ date +%s</p>
<p>+ export CACTUS_STARTTIME=<a href="https://bitbucket.org/einsteintoolkit/tickets/commits/1642991790" rel="nofollow" class="ap-connect-link">1642991790</a></p>
<p>+ CACTUS_STARTTIME=<a href="https://bitbucket.org/einsteintoolkit/tickets/commits/1642991790" rel="nofollow" class="ap-connect-link">1642991790</a></p>
<p>+ mpiexec -n 2 -npernode 2 /scratch/mbh0012/simulations/bnsG2/SIMFACTORY/exe/cactus_nst -L 3 /scratch/mbh0012/simulations/bnsG2/output-0000/nsnstohmns.par</p>
<p>[trcis001:09698] *** Process received signal ***</p>
<p>[trcis001:09698] Signal: Segmentation fault (11)</p>
<p>[trcis001:09698] Signal code: (128)</p>
<p>[trcis001:09698] Failing at address: (nil)</p>
<p>[trcis001:09698] [ 0] /lib64/libpthread.so.0(+0xf630)[0x2b4fc7e60630]</p>
<p>[trcis001:09698] [ 1] /shared/software/parallel/openmpi/4.1.2_gcc112/lib/libopen-rte.so.40(orte_get_attribute+0x21)[0x2b4fc6f4b101]</p>
<p>[trcis001:09698] [ 2] /shared/software/parallel/openmpi/4.1.2
<p><table><tr><td>attachment:</td><td><a href="https://api.bitbucket.org/2.0/repositories/einsteintoolkit/tickets/issues/2598/attachments/thornyflat.cfg">thornyflat.cfg</a></td></tr>
<tr><td>attachment:</td><td><a href="https://api.bitbucket.org/2.0/repositories/einsteintoolkit/tickets/issues/2598/attachments/thornyflat.ini">thornyflat.ini</a></td></tr>
<tr><td>attachment:</td><td><a href="https://api.bitbucket.org/2.0/repositories/einsteintoolkit/tickets/issues/2598/attachments/thornyflat.run">thornyflat.run</a></td></tr>
<tr><td>attachment:</td><td><a href="https://api.bitbucket.org/2.0/repositories/einsteintoolkit/tickets/issues/2598/attachments/thornyflay.sub">thornyflay.sub</a></td></tr>
</table></p>
<p>--<br/>
Ticket URL: <a href='https://bitbucket.org/einsteintoolkit/tickets/issues/2598/thornyflat-production-run-segmentation'>https://bitbucket.org/einsteintoolkit/tickets/issues/2598/thornyflat-production-run-segmentation</a></p>
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