[Users] Issues getting Einstein Toolkit built on Scientific Linux 6

Barry Wardell barry.wardell at gmail.com
Fri Dec 14 12:23:10 CST 2012


This should have been provided by the openmpi-devel package. Have you
installed that?
On 14 Dec 2012 13:04, "Joe Hellmers" <jhellmer at rohan.sdsu.edu> wrote:

> That seemed to fix that.
>
> Now I'm getting an error that mpi.h can't be found.
>
> Is MPI something I can install with yum too?
>
> Joe
>
> On Dec 14, 2012, at 9:05 AM, Barry Wardell wrote:
>
> Can you try installing the fftw-devel package? If that fixes it, I'll add
> that to the list in sl6.cfg.
>
> Barry
>
> On Fri, Dec 14, 2012 at 10:17 AM, Joe Hellmers <jhellmer at rohan.sdsu.edu>wrote:
>
>> That's seems to help but now I seem to be getting an error on FFTW3
>>
>> FFTW3
>>            Implements: FFTW3
>> FFTW3
>> FFTW3
>> FFTW3: Preparing directory structure...
>> FFTW3: Unpacking archive...
>> ~/EinsteinToolkit/Cactus/configs/sim/scratch/build/FFTW3
>> ~/EinsteinToolkit/Cactus/configs/sim/scratch
>> FFTW3: Configuring...
>> FFTW3: Building...
>>   -> Configuration script for thorn FFTW3 returned exit code 1
>> FFTW3 selected, but FFTW3_DIR not set. Checking some places...
>> FFTW3 not found
>> Using bundled FFTW3...
>> Building FFTW3
>> patching file Lorene/C++/Source/Non_class_members/Coef/FFTW3/Makefile
>> patching file Lorene/C++/Source/Non_class_members/Coef/FFTW3/Makefile_lib
>> patching file
>> Lorene/C++/Source/Non_class_members/Coef/FFTW3/Makefile_lib_g
>>   -> Configuration script for thorn FFTW3 returned exit code 1
>>
>> Is this another thing I need to install?
>>
>> Full log is attached.
>>
>>
>>
>> On Dec 13, 2012, at 10:12 PM, Barry Wardell wrote:
>>
>> Hi Joe,
>>
>> It looks like you are missing OpenMPI.
>>
>> Are you using the very latest version of sl6.cfg? That's the one here:
>> https://svn.cct.lsu.edu/repos/numrel/simfactory2/trunk/mdb/optionlists/sl6.cfg.
>> At the top of that it gives commands for installing gsl-devel and
>> openmpi-devel. The second of these should provide the necessary OpenMPI.
>>
>> hwloc selected, but HWLOC_DIR not set. Checking some places...
>>>
>>> I was able to get past that by installing hwloc-devel using yum as well.
>>>
>>
>> Unfortunately, the version provided by hwloc-devel is too old. If you use
>> the latest sl6.cfg it will build hwloc instead.
>>
>> Barry
>>
>>
>>
>>
>
>
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