[Users] using PBS -V on kraken

Roland Haas roland.haas at physics.gatech.edu
Fri Mar 9 12:52:30 CST 2012


Hello all,

> DATADIR (better: INPUTDIR, because it's shared between simulations,
> and simulations shouldn't really write there) would be set in the mdb.
> A future feature could be to copy data from INPUTDIR to the
> simulation's directory, if desired. INPUTDIR should be defined in the
> MDB.
NICS seems to have updated their system since I last used it. Now one
receives:

---8<---
Warning:
  Your job requests that all of your current shell environment
  settings (19410 bytes) be exported to it.  This is not
  recommended, as it may cause problems for the batch
  environment in some cases.  You are strongly encouraged
  to export individual environment variables with the
  -v variable_list directive instead; see the qsub man page
  for details

  Please contact help at xsede.org if you need assistance.
---8<---

So I would say that the "-V" option is definitely out.

Yours,
Roland

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