[Users] MPI killing issue in running the simulation

Roland Haas rhaas at illinois.edu
Tue Dec 22 10:14:02 CST 2020


Hello0 Karima,

sorry for the very long delay on this mailing list.

Unfortunately based on the information that you are providing, it is
not clear what caused the problem. 

MPI_ABORT is called by Cactus when it detect and error but also by MPI
itself under certain circumstances.

If Cactus called MPI_Abort then there will be some extra information
above the MPI_ABORT error message explaining the problem.

If you could attach the full *.err and *.out filesgenerators by the
simulation, then this would help a lot deciding what the issue is.

Yours,
Roland

> Hi there,
> 
> I am running a simple test (parameter file) using simfactory.
> 
> Input:
> 
> > ./simfactory/bin/sim create-run tstadm \
> >     --parfile repos/einsteinanalysis/testADM-0018.par  
> 
> Error:
> 
> > MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
> > with errorcode 1.
> >
> > NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
> > You may or may not see output from other processes, depending on
> > exactly when Open MPI kills them  
> along with the warning,
> > Warning: Too many threads per process specified: specified num-threads=2 (ppn-used is 2)
> > Warning: Total number of threads and number of threads per process are inconsistent: procs=1, num-threads=2 (procs*num-smt must be an integer multiple of num-threads).  
> How to resolve the issue?
> 
> Thanks in advance,
> 
> Best
> 
> karima
> 
> 
> 


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