[Users] Reg. HDF5 output of QuasiLocalMeasures variables part II

Vaishak P vaishak at iucaa.in
Sat Oct 3 11:50:28 CDT 2020


Dear All,

This is regarding the output of QuasiLocalMeasures variables in HDF5 format
in a BBH simulation similar to the gallery one. I am unable to output QLM
data in HDF5 format using the
"IOHDF5:out_vars" option for this run.

I had previously opened a ticket at

https://bitbucket.org/einsteintoolkit/tickets/issues/2451

where the issue is related to using "IOHDF5:out2d_vars" (and out_1dvars),
which is now fixed.

Please note that I am not facing this issue with "qlm-ks-outvars.par" test
case (details in the above ticket). This issue is only with the gallery run.

Also, I only face this issue when I request any QuasiLocalMeasures
variables to be output using "IOHDF5:out_vars" option. I

I am attaching the par files, the er and out files and the backtrace from
one of the procs.
The error is :


*'std::out_of_range'  what():  vector::_M_range_check: __n (which is 0) >=
this->size() (which is 0)*

Thanking you in anticipation




-- 
P. Vaishak

PhD Scholar,
Shyama Prasad Mukherjee Fellow
Inter-University Center for Astronomy and Astrophysics (IUCAA)
Pune, India
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Backtrace from rank 10 pid 65055:
1. CarpetLib::signal_handler(int)   [/mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim(_ZN9CarpetLib14signal_handlerEi+0x8e) [0x347971e]]
2. /lib64/libc.so.6(+0x35270) [0x2aae31020270]
3. /lib64/libc.so.6(gsignal+0x37) [0x2aae310201f7]
4. /lib64/libc.so.6(abort+0x148) [0x2aae310218e8]
5. /mnt/csoft/compilers/gcc-8.2.0/lib64/libstdc++.so.6(+0x8bc53) [0x2aae30ad1c53]
6. /mnt/csoft/compilers/gcc-8.2.0/lib64/libstdc++.so.6(+0x91db6) [0x2aae30ad7db6]
7. /mnt/csoft/compilers/gcc-8.2.0/lib64/libstdc++.so.6(+0x91df1) [0x2aae30ad7df1]
8. /mnt/csoft/compilers/gcc-8.2.0/lib64/libstdc++.so.6(+0x92023) [0x2aae30ad8023]
9. /mnt/csoft/compilers/gcc-8.2.0/lib64/libstdc++.so.6(+0x8db61) [0x2aae30ad3b61]
10. CarpetIOHDF5::WriteVarUnchunked(_cGH const*, int, double&, ioRequest const*, bool)   [/mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim(_ZN12CarpetIOHDF517WriteVarUnchunkedEPK4_cGHiRdPK9ioRequestb+0x1df0) [0x33ff930]]
11. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim() [0x33fce16]
12. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim() [0x33fbe5e]
13. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim() [0x413860a]
14. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim() [0x3ceff5d]
15. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim() [0x33caee0]
16. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim() [0x3eb1176]
17. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim() [0x3e4f9a2]
18. Carpet::Initialise(tFleshConfig*)   [/mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim(_ZN6Carpet10InitialiseEP12tFleshConfig+0x67e) [0x3eeca3e]]
19. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim(main+0x87) [0x14c1af7]
20. /lib64/libc.so.6(__libc_start_main+0xf5) [0x2aae3100cc05]
21. /mnt/scratch/cvaishak/simulations/ETK_10_2019p/gwtrial3/SIMFACTORY/exe/cactus_sim() [0xcc00e9]

The hexadecimal addresses in this backtrace can also be interpreted
with a debugger (e.g. gdb), or with the 'addr2line' (or 'gaddr2line')
command line tool: 'addr2line -e cactus_sim <address>'.
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