[Users] sim build problems
Lorenzo Bertassi
l.bertassi at campus.unimib.it
Thu Mar 24 06:43:49 CDT 2022
Hi,
I'm trying to build the EinsteinToolkit running the command:
./simfactory/bin/sim build -j2 --thornlist ../einsteintoolkit.th.
on my mac but the result, after nearly 1h, is the following:
Undefined symbols for architecture x86_64:
"_GOMP_loop_nonmonotonic_dynamic_next", referenced from:
__ZNK13CarpetInterp219fasterp_setup_gen_tINS_17fasterp_src_loc_tEE11interpolateEPK4_cGHRKSt6vectorIiSaIiEERS6_IPdSaISB_EE._omp_fn.0
in fasterp.cc.o
__ZNK13CarpetInterp219fasterp_setup_gen_tINS_22fasterp_eno2_src_loc_tEE11interpolateEPK4_cGHRKSt6vectorIiSaIiEERS6_IPdSaISB_EE._omp_fn.0
in fasterp.cc.o
__ZN10NaNChecker10CHECK_DATAIfEEvPKT_iPKdPKNS_17t_nanchecker_infoERiiiiiPKS5_PKcRK16GROUPDYNAMICDATAi._omp_fn.0
in NaNCheck.cc.o
__ZN10NaNChecker10CHECK_DATAIdEEvPKT_iPKdPKNS_17t_nanchecker_infoERiiiiiPKS5_PKcRK16GROUPDYNAMICDATAi._omp_fn.0
in NaNCheck.cc.o
__ZN10NaNChecker10CHECK_DATAIeEEvPKT_iPKdPKNS_17t_nanchecker_infoERiiiiiPKS5_PKcRK16GROUPDYNAMICDATAi._omp_fn.0
in NaNCheck.cc.o
_SetMatrix_JFD._omp_fn.0 in FuncAndJacobian.c.o
_J_times_dv._omp_fn.0 in FuncAndJacobian.c.o
...
"_GOMP_loop_nonmonotonic_dynamic_start", referenced from:
__ZNK13CarpetInterp219fasterp_setup_gen_tINS_17fasterp_src_loc_tEE11interpolateEPK4_cGHRKSt6vectorIiSaIiEERS6_IPdSaISB_EE._omp_fn.0
in fasterp.cc.o
__ZNK13CarpetInterp219fasterp_setup_gen_tINS_22fasterp_eno2_src_loc_tEE11interpolateEPK4_cGHRKSt6vectorIiSaIiEERS6_IPdSaISB_EE._omp_fn.0
in fasterp.cc.o
__ZN10NaNChecker10CHECK_DATAIfEEvPKT_iPKdPKNS_17t_nanchecker_infoERiiiiiPKS5_PKcRK16GROUPDYNAMICDATAi._omp_fn.0
in NaNCheck.cc.o
__ZN10NaNChecker10CHECK_DATAIdEEvPKT_iPKdPKNS_17t_nanchecker_infoERiiiiiPKS5_PKcRK16GROUPDYNAMICDATAi._omp_fn.0
in NaNCheck.cc.o
__ZN10NaNChecker10CHECK_DATAIeEEvPKT_iPKdPKNS_17t_nanchecker_infoERiiiiiPKS5_PKcRK16GROUPDYNAMICDATAi._omp_fn.0
in NaNCheck.cc.o
_SetMatrix_JFD._omp_fn.0 in FuncAndJacobian.c.o
_J_times_dv._omp_fn.0 in FuncAndJacobian.c.o
...
"_GOMP_loop_nonmonotonic_guided_next", referenced from:
___noexcision_mod_MOD_multiply._omp_fn.0 in NoExcision_mod.F90.o
___noexcision_mod_MOD_residual._omp_fn.0 in NoExcision_mod.F90.o
___noexcision_mod_MOD_residual._omp_fn.1 in NoExcision_mod.F90.o
___noexcision_mod_MOD_residual._omp_fn.2 in NoExcision_mod.F90.o
"_GOMP_loop_nonmonotonic_guided_start", referenced from:
___noexcision_mod_MOD_multiply._omp_fn.0 in NoExcision_mod.F90.o
___noexcision_mod_MOD_residual._omp_fn.0 in NoExcision_mod.F90.o
___noexcision_mod_MOD_residual._omp_fn.1 in NoExcision_mod.F90.o
___noexcision_mod_MOD_residual._omp_fn.2 in NoExcision_mod.F90.o
"_GOMP_parallel", referenced from:
_ADMDerivatives_CalcDerivatives in calc_derivs.cc.o
_Baikal_zero_rhss in zero_rhss.c.o
_Baikal_floor_the_lapse in floor_the_lapse.c.o
_Baikal_ADM_to_BSSN in ADM_to_BSSN.c.o
_Baikal_BSSN_to_ADM in BSSN_to_ADM.c.o
_Baikal_BSSN_Ricci_FD_order_2 in BSSN_Ricci_FD_order_2.c.o
_Baikal_BSSN_Ricci_FD_order_4 in BSSN_Ricci_FD_order_4.c.o
...
"__gfortran_os_error_at", referenced from:
_ahfinder_ in AHFinder.F.o
_ahfinder_dis_ in AHFinder_dis.F.o
_ahfinder_int_ in AHFinder_int.F.o
_linmin_ in AHFinder_pow.F.o
_ahfinder_initguess_ in AHFinder_initguess.F.o
_ahfinder_gau_ in AHFinder_gau.F.o
___carpet_boxtypes_MOD_splitregionsrecursive in carpet_boxtypes.F90.o
...
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make[1]: *** [/Users/lorenzo/Cactus/exe/cactus_sim] Error 1
make: *** [sim] Error 2
Is there a way to make it work?
I'm using a macbook air (2017) with macOs monterey 12.3 and xcode 13.3.
the gcc version is the following:
Apple clang version 13.1.6 (clang-1316.0.21.2)
Target: x86_64-apple-darwin21.4.0
Thread model: posix
InstalledDir:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
Best regards,
Lorenzo.
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