[Users] Help with GW150914 Black Hole simulation
Roland Haas
rhaas at illinois.edu
Thu Oct 26 14:57:53 CDT 2023
Hello Enzo,
The example parameter file on the website is not set up to produce VTK
output, so you will have to manually enable this output to be able to
visualize the horizon. You will also have to yourself run the
simulation or possible ask the original authors (see the Zenodo entry
https://zenodo.org/records/155394) for it.
To re-run with VTK output, take a look at the GW150915.rpar file linked
on the webpage. It contains a line (you can find it be searching for
the string "vtk"):
QuasiLocalMeasures::output_vtk_every = $out3d_every
which indicates that VTK files should be output every $out3d_every
iterations. This variable itself is set at the beginning of the
parameter file:
# out3d_every = rl0_every * 2
out3d_every = 0
to the special value of "0", which disables output. To enable output you
must set it to a positive value, and, guessing by the commented out
line just above, setting it to
out3d_every = rl0_every * 2
probably produces VTK output with the same frequency as shown in the
visualization example. Please note that this will likely produce quite
a bit (TB one assumes) of data output.
Yours,
Roland
> Thank you Zach for your reply, that clears it up.
>
> I have one more question then. Since I was not able to run the code in my
> laptop, I tried downloading the datafiles from the following site.
>
> https://urldefense.com/v3/__https://zenodo.org/record/155394__;!!DZ3fjg!8Xd1f_3xrvwCr1BselEIEcWYbwLB5bmfFc2eJ_7Hw3G0ZQprn3w4o8C4aH3aMjL-y71_B2kMgQTO3m3dyQ$
>
> I run into the following problem. When following the tutorial example in '
> https://urldefense.com/v3/__https://docs.einsteintoolkit.org/et-docs/GW150914_VisIt_Tutorial__;!!DZ3fjg!8Xd1f_3xrvwCr1BselEIEcWYbwLB5bmfFc2eJ_7Hw3G0ZQprn3w4o8C4aH3aMjL-y71_B2kMgQTvOSAD8w$ ' on the
> section "A visualization example", it shows a long folder of
> surface01_00xxxxx.vtk datafiles, all of which are different time steps for
> the black hole horizons. But when looking at the downloaded file, I cannot
> seem to find all these .vtk files. Instead I only find one .vtk file, and
> therefore am unable to run the complete simulation. Does anyone understand
> what's going on?
>
> Thank you so much for your help.
> Best regards,
> Enzo
>
> El lun, 9 oct 2023 a las 13:23, Zach Etienne (<zachetie at gmail.com>)
> escribió:
>
> > Hi Enzo,
> >
> > As the website warns: "Note that the simulation requires about 82 GB of
> > RAM, *so most likely you will need to use a cluster.*" As for the error,
> > MPI is probably seeing only one node (your laptop) so requesting 16 is
> > throwing an error.
> >
> > -Zach
> >
> > * * *
> > Zachariah Etienne
> > Assoc. Prof. of Physics, U. of Idaho
> > Adjunct Assoc. Prof. of Physics & Astronomy, West Virginia U.
> > https://urldefense.com/v3/__https://etienneresearch.com__;!!DZ3fjg!8Xd1f_3xrvwCr1BselEIEcWYbwLB5bmfFc2eJ_7Hw3G0ZQprn3w4o8C4aH3aMjL-y71_B2kMgQRPHutocQ$
> > https://urldefense.com/v3/__https://blackholesathome.net__;!!DZ3fjg!8Xd1f_3xrvwCr1BselEIEcWYbwLB5bmfFc2eJ_7Hw3G0ZQprn3w4o8C4aH3aMjL-y71_B2kMgQRScSdsEw$
> >
> >
> > On Mon, Oct 9, 2023 at 7:18 AM Enzo Iubini <egic.enzo at gmail.com> wrote:
> >
> >> Greetings to all.
> >>
> >> I've been having some problems running the GW150914 simulation. When
> >> following the tutorial on "
> >> https://urldefense.com/v3/__https://einsteintoolkit.org/gallery/bbh/cr.html__;!!DZ3fjg!8Xd1f_3xrvwCr1BselEIEcWYbwLB5bmfFc2eJ_7Hw3G0ZQprn3w4o8C4aH3aMjL-y71_B2kMgQSZHEDR4w$ " , I run into problems
> >> when running the parfile, specifically when running
> >>
> >> simfactory/bin/sim create-submit GW150914_28 --define N 28 --parfile par/GW150914/GW150914.rpar --procs 128 --walltime 24:00:00
> >>
> >>
> >> This leads to the error
> >>
> >> Parameter file: /home/enzo/Cactus/par/GW150914/GW150914.rpar
> >> Skeleton Created
> >> Job directory: "/home/enzo/simulations/GW150914_28"
> >> Executable: "/home/enzo/Cactus/exe/cactus_sim"
> >> Option list: "/home/enzo/simulations/GW150914_28/SIMFACTORY/cfg/OptionList"
> >> Submit script: "/home/enzo/simulations/GW150914_28/SIMFACTORY/run/SubmitScript"
> >> Run script: "/home/enzo/simulations/GW150914_28/SIMFACTORY/run/RunScript"
> >> Parameter file: "/home/enzo/simulations/GW150914_28/SIMFACTORY/par/GW150914.rpar"
> >> Assigned restart id: 0
> >>
> >> Error: Too many nodes specified: nodes=16 (maxnodes is 1)
> >> Aborting Simfactory.
> >>
> >>
> >> I am inclined to believe this is because I am running it on my own
> >> laptop, but I would nonetheless like to know exactly what does that error
> >> mean and if I can fix it somehow.
> >>
> >> I would really appreciate your help, thank you :)
> >>
> >> Best regards,
> >> Enzo
> >> _______________________________________________
> >> Users mailing list
> >> Users at einsteintoolkit.org
> >> https://urldefense.com/v3/__http://lists.einsteintoolkit.org/mailman/listinfo/users__;!!DZ3fjg!8Xd1f_3xrvwCr1BselEIEcWYbwLB5bmfFc2eJ_7Hw3G0ZQprn3w4o8C4aH3aMjL-y71_B2kMgQSU78F8dQ$
> >>
> >
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