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<p>I believe that kraken has just undergone a software upgrade.  Maybe the problem was introduced then?  Maxwell definitely compiled on kraken when it was released.
<br>
<br><font color="#999999">-- </font>
<br><font color="#999999">Ian Hinder</font>
<br><font color="#999999"><a href="mailto:ian.hinder@aei.mpg.de">ian.hinder@aei.mpg.de</a></font>
<br><font color="#999999"></font>
<br>
<br>----- Original message -----
<br>> Hi Erik.
<br>>
<br>> Thanks for the advice. I commented out all references to "signbit", and
<br>> to "kifpos" lower down, and it now gets through the Vectors thorn. I'm
<br>> now hitting an issue with an omp pragma in CarpetLib, but that's a
<br>> separate problem.
<br>>
<br>> BTW, I just tried to create a ticket (about the signbit issue) on
<br>> trac.einsteintoolkit.org, but ...
<br>>
<br>> "Submission rejected as potential spam"
<br>>
<br>> I thought it was the list of modules I put in, but even without them it
<br>> gets blocked.
<br>> Also, the TRAC system doesn't list the Maxwell release (ET_2011_10) as a
<br>> possible "version", which makes it hard to give an accurate report.
<br>>
<br>> Bernard
<br>>
<br>>
<br>> ---------------------------------------------------------------------------
<br>> --
<br>> Bernard Kelly -- CRESST Research Associate, NASA/GSFC
<br>>  
<br>> Phone: +1 (301) 286-7243
<br>> E-Mail: <a href="mailto:bernard.j.kelly@nasa.gov">bernard.j.kelly@nasa.gov</a>
<br>> Web:
<br>> <a href="http://science.gsfc.nasa.gov/sed/index.cfm?fuseAction=people.jumpBio&iphone">http://science.gsfc.nasa.gov/sed/index.cfm?fuseAction=people.jumpBio&iphone</a>
<br>> bookid=13052
<br>> ---------------------------------------------------------------------------
<br>> --
<br>>
<br>>
<br>>
<br>>
<br>>
<br>>
<br>>
<br>> On 2/6/12 11:17 PM, "Erik Schnetter" <<a href="mailto:schnetter@cct.lsu.edu">schnetter@cct.lsu.edu</a>> wrote:
<br>>
<br>> > Bernard
<br>> >
<br>> > test.cc is just a self-test. You can try commenting out the respective
<br>> > code (or the whole routine), and see where this gets you.
<br>> >
<br>> > Carpet (which may also use signbit) has a different, more complex
<br>> > logic to handle various levels of C++ compliance, and may actually
<br>> > still do the right thing.
<br>> >
<br>> > -erik
<br>> >
<br>> > On Mon, Feb 6, 2012 at 10:53 PM, Kelly, Bernard J.
<br>> > (GSFC-660.0)[UNIVERSITY OF MARYLAND BALTIMORE COUNTY]
<br>> > <<a href="mailto:bernard.j.kelly@nasa.gov">bernard.j.kelly@nasa.gov</a>> wrote:
<br>> > > Hi all.
<br>> > >
<br>> > > I recently checked out ETK Maxwell on the machine XSEDE machine
<br>> > > Kraken, and am having trouble compiling and running a simple test
<br>> > > case. The problem is with LSUThorns/Vectors/src/test.cc, where the
<br>> > > "signbit" function is (apparently) undefined. No doubt the problem
<br>> > > recurs with later
<br>> > > source files, but I can't get past this one without abandoning
<br>> > > Vectors and
<br>> > > hence all of Carpet.
<br>> > >
<br>> > > Now I can compile a "hello world" program in C invoking signbit.cc
<br>> > > without
<br>> > > a problem, as long as I include <math.h>, so presumably the ETK
<br>> > > process is
<br>> > > looking in the wrong location for this library or its headers.
<br>> > >
<br>> > > Since Kraken is a "known" machine in ETK's simfactory, and lots of
<br>> > > Numerical Relativity groups must have used it during the recently
<br>> > > expired
<br>> > > "NR-AR" allocation, I assume the problem's at my end. Any ideas?
<br>> > >
<br>> > > Thanks,
<br>> > >
<br>> > > Bernard
<br>> > >
<br>> > > Some details:
<br>> > >
<br>> > > (1) I initially used the simfactory "build" mechanism, but I have
<br>> > > this problem with a straightforward Cactus "make" as well.
<br>> > >
<br>> > > (2) Here's a list of my loaded modules on Kraken. I'm using the PGI
<br>> > > compilers (item 18 below):
<br>> > >
<br>> > > 1) modules/3.1.6.5
<br>> > > 2) torque/2.4.14
<br>> > > 3) moab/5.4.3.s16991
<br>> > > 4) /opt/cray/xt-asyncpe/default/modulefiles/xtpe-istanbul
<br>> > > 5) tgusage/3.0-r2
<br>> > > 6) altd/1.0
<br>> > > 7) DefApps
<br>> > > 8) xtpe-target-cnl
<br>> > > 9) xt-service/2.2.74
<br>> > > 10) xt-os/2.2.74
<br>> > > 11) xt-boot/2.2.74
<br>> > > 12) xt-lustre-ss/2.2.74_1.6.5
<br>> > > 13) cray/job/1.5.5-0.1_2.0202.21413.56.7
<br>> > > 14) cray/csa/3.0.0-1_2.0202.21426.77.7
<br>> > > 15) cray/account/1.0.0-2.0202.19482.49.18
<br>> > > 16) cray/projdb/1.0.0-1.0202.19483.52.1
<br>> > > 17) Base-opts/2.2.74
<br>> > > 18) pgi/11.4.0
<br>> > > 19) xt-libsci/10.5.02
<br>> > > 20) pmi/2.1.4-1.0000.8596.15.1.ss
<br>> > > 21) xt-mpt/5.2.3
<br>> > > 22) xt-pe/2.2.74
<br>> > > 23) xt-asyncpe/4.9
<br>> > > 24) PrgEnv-pgi/2.2.74
<br>> > > 25) cray/MySQL/5.0.64-1.0202.2899.21.1
<br>> > > 26) git/1.7.4.2
<br>> > > 27) python/2.6.4
<br>> > > 28) mercurial/1.6.4
<br>> > > 29) subversion/1.6.9
<br>> > > 30) hdf5-parallel/1.6.10
<br>> > >
<br>> > >
<br>> > >
<br>> > >
<br>> > > -------------------------------------------------------------------------
<br>> > > --
<br>> > > --
<br>> > > Bernard Kelly -- CRESST Research Associate, NASA/GSFC
<br>> > >
<br>> > > Phone: +1 (301) 286-7243
<br>> > > E-Mail: <a href="mailto:bernard.j.kelly@nasa.gov">bernard.j.kelly@nasa.gov</a>
<br>> > > Web:
<br>> > >
<br>> > > <a href="http://science.gsfc.nasa.gov/sed/index.cfm?fuseAction=people.jumpBio&ipho">http://science.gsfc.nasa.gov/sed/index.cfm?fuseAction=people.jumpBio&ipho</a>
<br>> > > ne
<br>> > > bookid=13052
<br>> > >
<br>> > > -------------------------------------------------------------------------
<br>> > > --
<br>> > > --
<br>> > >
<br>> > >
<br>> > >
<br>> > >
<br>> > >
<br>> > > _______________________________________________
<br>> > > Users mailing list
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<br>> > > <a href="http://lists.einsteintoolkit.org/mailman/listinfo/users">http://lists.einsteintoolkit.org/mailman/listinfo/users</a>
<br>> >
<br>> >
<br>> >
<br>> > --
<br>> > Erik Schnetter <<a href="mailto:schnetter@cct.lsu.edu">schnetter@cct.lsu.edu</a>>  
<br>> > <a href="http://www.cct.lsu.edu/~eschnett/">http://www.cct.lsu.edu/~eschnett/</a>
<br>>
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