<div dir="ltr">Lucy<div><br></div><div>Have you tried using the Einstein Toolkit on Queen Bee, as suggested here <<a href="https://docs.einsteintoolkit.org/et-docs/Tutorial_for_New_Users">https://docs.einsteintoolkit.org/et-docs/Tutorial_for_New_Users</a>>?</div><div><br></div><div>-erik</div></div><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Sep 6, 2016 at 11:56 AM, L.S. Oswald <span dir="ltr"><<a href="mailto:lo280@cam.ac.uk" target="_blank">lo280@cam.ac.uk</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Dear Erik<br>
<br>
In general I've been using the commands at <a href="https://docs.einsteintoolkit.org/et-docs/Simplified_Tutorial_for_New_Users" rel="noreferrer" target="_blank">https://docs.einsteintoolkit.o<wbr>rg/et-docs/Simplified_Tutorial<wbr>_for_New_Users</a>. I have tried configuring with the debian.cfg file and also attempted creating my own configuration file. Moving onto a different computer solved my MPI issue but produced a new error, which I've written about in my reply to Rahul. I'm afraid I don't know what type of computer I'm using now but I should be able to find out tomorrow.<br>
<br>
Hopefully my other email gives an overview of my latest problem. I attach the full log of the output received when building the toolkit.<br>
<br>
Many thanks for your help,<br>
<br>
Lucy<div><div class="h5"><br>
<br>
On 2016-09-06 5:41 pm, Erik Schnetter wrote:<br>
</div></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div class="h5">
Lucy<br>
<br>
The Simulation Factory has several example option lists for Cray<br>
systems; look e.g. at bluewaters or edison. I don't recommend changing<br>
the "config-info" file, since this file will be overwritten. Instead,<br>
you can set such options in your option list.<br>
<br>
If you need more help, then we'll need more details: What kind of Cray<br>
system is this? What options did you pass when you configured the<br>
Einstein Toolkit? What output did you receive while configuring? etc.<br>
<br>
-erik<br>
<br>
On Mon, Aug 29, 2016 at 12:47 PM, L.S. Oswald <<a href="mailto:lo280@cam.ac.uk" target="_blank">lo280@cam.ac.uk</a>> wrote:<br>
<br>
</div></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div class="h5">
Hello<br>
<br>
I'm attempting to install the Einstein Toolkit on Dora, which is a<br>
Cray<br>
system supercomputer. In doing so I came across the following<br>
error:<br>
<br>
Configuration script for thorn MPI returned exit code 5<br>
Error message: 'MPI could not be configured: neither<br>
automatic nor<br>
manual configuration succeeded'<br>
<br>
In addition the log stated that:<br>
No MPI compiler wrapper found beneath MPI_DIR (MPI_DIR =<br>
/usr)<br>
<br>
I subsequently discovered that it was looking in the wrong place<br>
for the<br>
MPI root directory and that the reason it was looking under /usr<br>
instead<br>
of /opt/cray/mpt/7.3.2/gni/mpich-<wbr>cray/8.3 was because that was the<br>
setting in the ubuntu configuration file that I had used when<br>
configuring SimFactory. On a reattempt therefore I did not use the<br>
ubuntu.cfg file when configuring SimFactory, and got the following<br>
error<br>
instead:<br>
<br>
Configuring with flesh MPI<br>
Warning: use of flesh MPI via MPI option is deprecated and<br>
should be replaced with the thorn ExternalLibraries/MPI and its<br>
MPI_DIR<br>
option<br>
MPI selected, but no known MPI method - what is<br>
"/opt/cray/mpt/7.3.2/gni/mpich<wbr>-cray/8.3" ?<br>
<br>
Attempts at altering the Makefile and the config-info file resulted<br>
in<br>
either no change, or more errors.<br>
<br>
Please would you be able to advise me on the correct way to specify<br>
the<br>
root directory for MPI?<br>
<br>
Many thanks,<br>
<br>
Lucy Oswald<br>
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</blockquote>
<br>
--<br>
<br>
Erik Schnetter <<a href="mailto:schnetter@cct.lsu.edu" target="_blank">schnetter@cct.lsu.edu</a>><br>
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<br>
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</blockquote></div><br><br clear="all"><div><br></div>-- <br><div class="gmail_signature" data-smartmail="gmail_signature">Erik Schnetter <<a href="mailto:schnetter@cct.lsu.edu" target="_blank">schnetter@cct.lsu.edu</a>><br><a href="http://www.perimeterinstitute.ca/personal/eschnetter/" target="_blank">http://www.perimeterinstitute.ca/personal/eschnetter/</a></div>
</div>