<html><head><meta http-equiv="Content-Type" content="text/html charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><br><div><div>On 6 Feb 2017, at 02:08, Guy Pitman <<a href="mailto:guy.pitman@bigpond.com">guy.pitman@bigpond.com</a>> wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><meta http-equiv="Content-Type" content="text/html charset=us-ascii"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Ian,<div class=""><br class=""></div><div class="">I ran the following command <span style="font-family: Menlo; font-size: 11px; background-color: rgb(255, 255, 255);" class="">./simfactory/bin/sim build --mdbkey make 'make -j2' --thornlist=<a href="http://kranc.th/" class="">kranc.th</a> with the attached T</span><font face="Menlo" class=""><span style="font-size: 11px;" class="">hornlist, which included the CT_Dust Kranc thorn, and then ran </span></font></div><div class=""><div style="margin: 0px; font-size: 11px; line-height: normal; font-family: Menlo; background-color: rgb(255, 255, 255); position: static; z-index: auto;" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">./simfactory/bin/sim submit static_tov --parfile=par/static_tov_small.par --procs=1 --walltime=8:0:0 with the attached parameter file, which also includes CT_Dust , but when I look at the output in ~</span>/simulations/static_tov/output-0003, the static_tov_small.par which I assume has been copied from the par directory has CT_Dust removed? The static_tov.out file also has no reference to CT_Dust. Can you see what I am doing wrong?</div></div><div style="margin: 0px; font-size: 11px; line-height: normal; font-family: Menlo; background-color: rgb(255, 255, 255);" class=""><br class=""></div></div></blockquote><div><br></div><div>Hi,</div><div><br></div><div>sim submit not only creates a new simulation, but also continues existing simulations. The fact that you have an output-0003 means this is the 4th time you have submitted the same simulation. In that case, I don't know whether simfactory tries to update the parameter file. It really shouldn't accept the option without an error if it's just going to ignore it, but I wouldn't be surprised if it did. I suggest to delete the whole simulation and try again. You can also use</div><div><br></div><div><span class="Apple-tab-span" style="white-space:pre"> </span>sim purge static_tov</div><div><br></div><div>which will do the deletion.</div><div><br></div></div><div apple-content-edited="true">
<div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><div>-- </div><div>Ian Hinder</div><div><a href="http://members.aei.mpg.de/ianhin">http://members.aei.mpg.de/ianhin</a></div></div></div></div></div>
</div>
<br></body></html>