<div dir="ltr"><div><div><div><div>Hi Ian,<br><br></div>I noticed that there is a CESSI-BEAST.ini. I have 24 cores on my machine, I did the following changes,<br><br>ppn = 256<br>max-num-threads = 256<br>num-threads = 24<br>nodes = 1<br><br></div>While running, I see the following:<br><br>+ set -e<br>+ cd /disk1/maitraya/Einstein_Toolkit/ET_Simulations/static_tov/output-0000-active<br>+ echo Checking:<br>+ pwd<br>+ hostname<br>+ date<br>+ echo Environment:<br>+ export CACTUS_NUM_PROCS=1<br>+ CACTUS_NUM_PROCS=1<br>+ export CACTUS_NUM_THREADS=24<br>+ CACTUS_NUM_THREADS=24<br>+ export GMON_OUT_PREFIX=gmon.out<br>+ GMON_OUT_PREFIX=gmon.out<br>+ export OMP_NUM_THREADS=24<br>+ OMP_NUM_THREADS=24<br>+ env<br>+ echo Starting:<br>++ date +%s<br>+ export CACTUS_STARTTIME=1502385989<br>+ CACTUS_STARTTIME=1502385989<br>+ mpirun -np 1 /disk1/maitraya/Einstein_Toolkit/ET_Simulations/static_tov/SIMFACTORY/exe/cactus_sim -L 3 /disk1/maitraya/Einstein_Toolkit/ET_Simulations/static_tov/output-0000/static_tov.par<br><br></div>I want to get the -np of the mpirun command to be 24. How do I achieve this ?<br><br></div>Maitraya.<br></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Aug 10, 2017 at 10:21 PM, Maitraya Bhattacharyya <span dir="ltr"><<a href="mailto:maitraya.linux@gmail.com" target="_blank">maitraya.linux@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><div>Hi,<br><br></div>There isn't one, so I assume that I will have to create one ?<span class="HOEnZb"><font color="#888888"><br><br></font></span></div><span class="HOEnZb"><font color="#888888">Maitraya.<br></font></span></div><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Aug 10, 2017 at 10:09 PM, Ian Hinder <span dir="ltr"><<a href="mailto:ian.hinder@aei.mpg.de" target="_blank">ian.hinder@aei.mpg.de</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word"><br><div><span><div>On 10 Aug 2017, at 11:32, Maitraya Bhattacharyya <<a href="mailto:maitraya.linux@gmail.com" target="_blank">maitraya.linux@gmail.com</a>> wrote:</div><br class="m_6516123718900872438m_-7772466618518698885Apple-interchange-newline"></span><blockquote type="cite"><div dir="ltr"><div><div><div><div><div><div><div>Hi Ian,<br><br></div><div><div class="m_6516123718900872438h5">Sorry! I forgot to reply to all.<br><br></div></div></div><div><div class="m_6516123718900872438h5">My symfactory defs.local.ini is:<br><br><br>[default]<br>user = mkb14ip002<br>email = mkb14ip002<br>allocation = NO_ALLOCATION<br><br>[CESSI-BEAST]<br>user = mkb14ip002<br>email = mkb14ip002<br>allocation = NO_ALLOCATION<br>basedir = /disk1/maitraya/Einstein_Toolk<wbr>it/ET_Simulations <br><br></div></div></div><div><div class="m_6516123718900872438h5">My machine is CESSI-BEAST, something that I added later for basedir to work.<br><br></div></div></div><div><div class="m_6516123718900872438h5">The command I typed was: ./simfactory/bin/sim submit static_tov --parfile=par/static_tov.par --procs=20 --walltime=8:0:0<br><br></div></div></div><div><div class="m_6516123718900872438h5">And the output:<br>Warning: simulation "static_tov" does not exist or is not readable<br>Parameter file: /disk1/maitraya/Einstein_Toolk<wbr>it/Cactus/par/static_tov.par<br>Skeleton Created<br>Job directory: "/disk1/maitraya/Einstein_Tool<wbr>kit/ET_Simulations/static_tov"<br>Executable: "/disk1/maitraya/Einstein_Tool<wbr>kit/Cactus/exe/cactus_sim"<br>Option list: "/disk1/maitraya/Einstein_Tool<wbr>kit/ET_Simulations/static_tov/<wbr>SIMFACTORY/cfg/OptionList"<br>Submit script: "/disk1/maitraya/Einstein_Tool<wbr>kit/ET_Simulations/static_tov/<wbr>SIMFACTORY/run/SubmitScript"<br>Run script: "/disk1/maitraya/Einstein_Tool<wbr>kit/ET_Simulations/static_tov/<wbr>SIMFACTORY/run/RunScript"<br>Parameter file: "/disk1/maitraya/Einstein_Tool<wbr>kit/ET_Simulations/static_tov/<wbr>SIMFACTORY/par/static_tov.par"<br>Assigned restart id: 0 <br>Error: Too many nodes specified: nodes=20 (maxnodes is 1)<br>Aborting Simfactory.<br></div></div></div></div></div></blockquote><div><br></div><div>Please can you post simfactory/mdb/machines/CESSI-<wbr>BEAST.ini?</div><div><br></div><div>You probably want to set "ppn = 20" in that file.</div><div><br></div></div><span><div>
<div style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;word-wrap:break-word"><div style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;word-wrap:break-word"><div style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;word-wrap:break-word"><div style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;word-wrap:break-word"><div>-- </div><div>Ian Hinder</div><div><a href="http://members.aei.mpg.de/ianhin" target="_blank">http://members.aei.mpg.de/ianh<wbr>in</a></div></div></div></div></div>
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