<div dir="ltr"><div><div><div>Hi Ian,<br><br></div>I have 24 physical cores with hyperthreading switched off.<br><br></div>Thanks,<br></div>Maitraya.<br></div><div class="gmail_extra"><br><div class="gmail_quote">On Fri, Aug 11, 2017 at 12:28 AM, Ian Hinder <span dir="ltr"><<a href="mailto:ian.hinder@aei.mpg.de" target="_blank">ian.hinder@aei.mpg.de</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word"><br><div><span class=""><div>On 10 Aug 2017, at 12:29, Maitraya Bhattacharyya <<a href="mailto:maitraya.linux@gmail.com" target="_blank">maitraya.linux@gmail.com</a>> wrote:</div><br class="m_-3565553638763076047Apple-interchange-newline"></span><blockquote type="cite"><div dir="ltr"><div><div><div><div>Hi Ian,<br><br></div><span class="">I noticed that there is a CESSI-BEAST.ini. I have 24 cores on my machine, I did the following changes,<br><br>ppn = 256<br>max-num-threads = 256<br>num-threads = 24<br>nodes = 1<br></span></div></div></div></div></blockquote><div><br></div><div>Hi,</div><div><br></div><div>The terminology in simfactory is confusing, because it is quite old, and the meaning of some commonly-used terms has changed. The full details of what everything means are at <a href="http://simfactory.org/info/documentation/userguide/processterminology.html" target="_blank">http://simfactory.org/info/<wbr>documentation/userguide/<wbr>processterminology.html</a>.</div><div><br></div><div>Do you really have 24 physical cores, or do you have a processor with 24 hyperthreads on 12 cores? If Linux reports 24 cores, then if you have hyperthreading, you likely only have 12 cores. </div><div><br></div><div>Can you post the output of "lscpu"?</div><div><br></div></div><span class=""><div>
<div style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;word-wrap:break-word"><div style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;word-wrap:break-word"><div style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;word-wrap:break-word"><div style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;word-wrap:break-word"><div>-- </div><div>Ian Hinder</div><div><a href="http://members.aei.mpg.de/ianhin" target="_blank">http://members.aei.mpg.de/<wbr>ianhin</a></div></div></div></div></div>
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