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<p><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">Dear Ian,</span></p>
<p><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">I followed the steps in this page:</span></p>
<p><a href="http://simulationtools.org/Documentation/English/Tutorials/Introduction.html" class="OWAAutoLink" id="LPlnk203374" previewremoved="true"><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">http://simulationtools.org/Documentation/English/Tutorials/Introduction.html</span></a><br>
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<p><span style="color: rgb(33, 33, 33); font-family: "Microsoft JHengHei UI", "Microsoft JHengHei", 微軟正黑體, MingLiU, 細明體, sans-serif, serif, EmojiFont; font-size: 15px;"><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">I have </span><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">installed
both </span><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">SimulationTools and h5mma into my home directory </span><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">in Edison</span><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">,
but I cannot move it to </span><span style="color: rgb(73, 73, 73); font-family: Arial, Helvetica, sans-serif; font-size: 12pt;">~/Library/</span><span style="clear: both; color: rgb(73, 73, 73); font-family: Arial, Helvetica, sans-serif; font-size: 12pt;">Mathematica</span><span style="color: rgb(73, 73, 73); font-family: Arial, Helvetica, sans-serif; font-size: 12pt;">/Applications
which seems to be a required step :</span></span><br>
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<p><span style="color: rgb(33, 33, 33); font-family: "Microsoft JHengHei UI", "Microsoft JHengHei", 微軟正黑體, MingLiU, 細明體, sans-serif, serif, EmojiFont; font-size: 15px;"><span style="color: rgb(73, 73, 73); font-family: Arial, Helvetica, sans-serif; font-size: 12pt;"><img size="71587" contenttype="image/png" id="img12438" contextid="img526636" style="max-width: 99.9%; user-select: none;" tabindex="0" src="cid:0236c56d-986a-4a2f-97f9-43516b47327e"><br>
the message is below:</span></span></p>
<p><span style="color: rgb(33, 33, 33); font-family: "Microsoft JHengHei UI", "Microsoft JHengHei", 微軟正黑體, MingLiU, 細明體, sans-serif, serif, EmojiFont; font-size: 15px;"><span style="color: rgb(73, 73, 73); font-family: Verdana; font-size: 12px;"><img size="260681" contenttype="image/png" id="img764971" contextid="img711704" style="max-width: 99.9%; user-select: none;" tabindex="0" src="cid:31afc672-e8f7-4e8c-a2e0-8ad7f243a9af"><br>
<span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">By the way, I have installed NX,which</span><span style="color: rgb(23, 48, 64); font-family: "Helvetica Neue", Arial, Helvetica, sans-serif; font-size: 12px;"><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;"> is
a computer program that handles remote X Window System connections to run Methematica. And I tried directly load SimulationTools (maybe there is
</span><span style="color: rgb(23, 48, 64); font-family: Arial, Helvetica, sans-serif; font-size: 12pt;">SimulationTools </span><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">already installed in Edison, </span><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">or
maybe I can load </span><span style="color: rgb(23, 48, 64); font-family: Arial, Helvetica, sans-serif; font-size: 12pt;">SimulationTools even it is located in my home directory</span><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">)
like below:</span></span></span></span></p>
<p><span style="color: rgb(33, 33, 33); font-family: "Microsoft JHengHei UI", "Microsoft JHengHei", 微軟正黑體, MingLiU, 細明體, sans-serif, serif, EmojiFont; font-size: 15px;"><span style="color: rgb(73, 73, 73); font-family: Verdana; font-size: 12px;"><span style="color: rgb(23, 48, 64); font-family: "Helvetica Neue", Arial, Helvetica, sans-serif; font-size: 12px;"><img size="430784" contenttype="image/png" id="img343747" contextid="img946643" style="max-width: 99.9%; user-select: none;" tabindex="0" src="cid:1aafd2b5-c35a-4685-9a54-48ee0ab372a0"><br>
<span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">It failed, so </span><span style="color: rgb(23, 48, 64); font-family: "Helvetica Neue", Arial, Helvetica, sans-serif; font-size: 12px;"><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">SimulationTools
seems to be required to move to Application directory of Mathematica</span><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">.</span></span></span></span></span></p>
<p><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">Best regards,</span></p>
<p><span style="font-size: 12pt; font-family: Arial, Helvetica, sans-serif;">Chia-Hui Lin</span></p>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>寄件者:</b> ian.hinder@aei.mpg.de <ian.hinder@aei.mpg.de><br>
<b>寄件日期:</b> 2018年2月10日 上午 05:29:23<br>
<b>收件者:</b> 林家暉<br>
<b>副本:</b> rhaas@ncsa.illinois.edu; Einstein Toolkit Users; Eloisa Bentivegna<br>
<b>主旨:</b> Re: [Users] questions about compilation</font>
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<div class="">On 9 Feb 2018, at 16:33, 林家暉 <<a href="mailto:r06222015@ntu.edu.tw" class="">r06222015@ntu.edu.tw</a>> wrote:</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">Dear Ian,</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Thanks for your reply.</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Besides VisIt, I also tried SimulationTools as another way to analyze data. </div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">However I do not have Mathematica installed in my local machine(which is a laptop) , so I tried to use the Mathematica in Edison. But it seems that I do not have permission to load a new tool on the
cluster. Is there any method can I use it on a super cluster?</div>
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<div class="">Hi,</div>
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<div class="">I don't know what you mean "permission to load a new tool on the cluster". You can install SimulationTools into your home directory, as described in the installation instructions. This should not need any special technical permissions. If this
is what you tried, and it doesn't work, can you give some more details about what you did and what went wrong?</div>
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<div class="">If you mean that you are not *allowed* to install external software in your home directory, then I don't know how you can use SimulationTools on the cluster, as it would need to be installed. In any case, in order to visualise the data, you will
need a graphical display, so presumably you would need to use Mathematica with X forwarding or similar. Unless you have quite a fast connection to the cluster, this might be too slow to be usable. There is no problem with using SimulationTools in Mathematica
from the command line or in scripts, but I suspect that's not really what you need.</div>
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<div class="">What I usually do is copy the required data from the cluster to my laptop, and visualise it with SimulationTools in Mathematica on my laptop. If the data is too big to transfer, I use Mathematica's "remote kernel" feature, where the notebook
interface runs on my laptop, and the kernel runs on the cluster, where it can directly access the data. This way, only the visualisation needs to be sent over the network, not the original raw data. Of course, Mathematica is very expensive, so this might
not be an ideal solution for you. </div>
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<div class=""><span style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; display: inline !important; float: none;" class="">-- </span><br style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;" class="">
<span style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; display: inline !important; float: none;" class="">Ian
Hinder</span><br style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;" class="">
<span style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; display: inline !important; float: none;" class=""><a href="http://members.aei.mpg.de/ianhin" class="">http://members.aei.mpg.de/ianhin</a></span>
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