BUILD FAILURE

Build URL:https://build.barrywardell.net/job/EinsteinToolkit/1501/
Project:EinsteinToolkit
Date of build:Mon, 23 Dec 2019 19:22:25 +0000
Build duration:13 min

Changes

Revision: 7999a5093c38982aff6b7c7527cce637edfb97aa
Author:Einstein Toolkit Git Server
Log:
Updated submodules:

* arrangements/ExternalLibraries/hwloc 69abd31...5287ea1 (2):
  > Check hwloc API version at startup
  > Correct auto-detecting HWLOC_DIR


Artifacts

  • doc/HTML.tar.gz

  • Console Output

    
    	[...truncated 558.40 KB...]
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_linux_libnuma_bitmask.3 doxygen-doc/man/man3/hwloc_cpuset_from_linux_libnuma_bitmask.3 doxygen-doc/man/man3/hwloc_nodeset_from_linux_libnuma_bitmask.3 doxygen-doc/man/man3/hwloc_cpuset_to_linux_libnuma_bitmask.3 doxygen-doc/man/man3/hwloc_nodeset_to_linux_libnuma_bitmask.3 doxygen-doc/man/man3/hwlocality_linux_libnuma_ulongs.3 doxygen-doc/man/man3/hwloc_cpuset_from_linux_libnuma_ulongs.3 doxygen-doc/man/man3/hwloc_nodeset_from_linux_libnuma_ulongs.3 doxygen-doc/man/man3/hwloc_cpuset_to_linux_libnuma_ulongs.3 doxygen-doc/man/man3/hwloc_nodeset_to_linux_libnuma_ulongs.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_membinding.3 doxygen-doc/man/man3/HWLOC_MEMBIND_BIND.3 doxygen-doc/man/man3/HWLOC_MEMBIND_DEFAULT.3 doxygen-doc/man/man3/HWLOC_MEMBIND_FIRSTTOUCH.3 doxygen-doc/man/man3/HWLOC_MEMBIND_INTERLEAVE.3 doxygen-doc/man/man3/HWLOC_MEMBIND_MIGRATE.3 doxygen-doc/man/man3/HWLOC_MEMBIND_MIXED.3 doxygen-doc/man/man3/HWLOC_MEMBIND_NEXTTOUCH.3 doxygen-doc/man/man3/HWLOC_MEMBIND_NOCPUBIND.3 doxygen-doc/man/man3/HWLOC_MEMBIND_BYNODESET.3 doxygen-doc/man/man3/HWLOC_MEMBIND_PROCESS.3 doxygen-doc/man/man3/HWLOC_MEMBIND_REPLICATE.3 doxygen-doc/man/man3/HWLOC_MEMBIND_STRICT.3 doxygen-doc/man/man3/HWLOC_MEMBIND_THREAD.3 doxygen-doc/man/man3/hwloc_membind_flags_t.3 doxygen-doc/man/man3/hwloc_membind_policy_t.3 doxygen-doc/man/man3/hwloc_set_membind.3 doxygen-doc/man/man3/hwloc_set_membind_nodeset.3 doxygen-doc/man/man3/hwloc_get_membind.3 doxygen-doc/man/man3/hwloc_get_membind_nodeset.3 doxygen-doc/man/man3/hwloc_set_proc_membind.3 doxygen-doc/man/man3/hwloc_set_proc_membind_nodeset.3 doxygen-doc/man/man3/hwloc_get_proc_membind.3 doxygen-doc/man/man3/hwloc_get_proc_membind_nodeset.3 doxygen-doc/man/man3/hwloc_set_area_membind.3 doxygen-doc/man/man3/hwloc_set_area_membind_nodeset.3 doxygen-doc/man/man3/hwloc_get_area_membind.3 doxygen-doc/man/man3/hwloc_get_area_membind_nodeset.3 doxygen-doc/man/man3/hwloc_get_area_memlocation.3 doxygen-doc/man/man3/hwloc_alloc.3 doxygen-doc/man/man3/hwloc_alloc_membind.3 doxygen-doc/man/man3/hwloc_alloc_membind_nodeset.3 doxygen-doc/man/man3/hwloc_alloc_membind_policy.3 doxygen-doc/man/man3/hwloc_alloc_membind_policy_nodeset.3 doxygen-doc/man/man3/hwloc_free.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_myriexpress.3 doxygen-doc/man/man3/hwloc_mx_board_get_device_cpuset.3 doxygen-doc/man/man3/hwloc_mx_endpoint_get_device_cpuset.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_info_attr.3 doxygen-doc/man/man3/hwloc_obj_get_info_by_name.3 doxygen-doc/man/man3/hwloc_obj_add_info.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_object_sets.3 doxygen-doc/man/man3/hwloc_bitmap_t.3 doxygen-doc/man/man3/hwloc_const_bitmap_t.3 doxygen-doc/man/man3/hwloc_cpuset_t.3 doxygen-doc/man/man3/hwloc_const_cpuset_t.3 doxygen-doc/man/man3/hwloc_nodeset_t.3 doxygen-doc/man/man3/hwloc_const_nodeset_t.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_object_strings.3 doxygen-doc/man/man3/hwloc_obj_type_string.3 doxygen-doc/man/man3/hwloc_obj_type_snprintf.3 doxygen-doc/man/man3/hwloc_obj_attr_snprintf.3 doxygen-doc/man/man3/hwloc_obj_cpuset_snprintf.3 doxygen-doc/man/man3/hwloc_obj_type_sscanf.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_object_types.3 doxygen-doc/man/man3/HWLOC_OBJ_BRIDGE.3 doxygen-doc/man/man3/HWLOC_OBJ_CACHE.3 doxygen-doc/man/man3/HWLOC_OBJ_CORE.3 doxygen-doc/man/man3/HWLOC_OBJ_GROUP.3 doxygen-doc/man/man3/HWLOC_OBJ_MACHINE.3 doxygen-doc/man/man3/HWLOC_OBJ_MISC.3 doxygen-doc/man/man3/HWLOC_OBJ_NUMANODE.3 doxygen-doc/man/man3/HWLOC_OBJ_OS_DEVICE.3 doxygen-doc/man/man3/HWLOC_OBJ_PU.3 doxygen-doc/man/man3/HWLOC_OBJ_PCI_DEVICE.3 doxygen-doc/man/man3/HWLOC_OBJ_PACKAGE.3 doxygen-doc/man/man3/HWLOC_OBJ_SYSTEM.3 doxygen-doc/man/man3/hwloc_obj_type_t.3 doxygen-doc/man/man3/HWLOC_OBJ_CACHE_UNIFIED.3 doxygen-doc/man/man3/HWLOC_OBJ_CACHE_DATA.3 doxygen-doc/man/man3/HWLOC_OBJ_CACHE_INSTRUCTION.3 doxygen-doc/man/man3/hwloc_obj_cache_type_e.3 doxygen-doc/man/man3/hwloc_obj_cache_type_t.3 doxygen-doc/man/man3/HWLOC_OBJ_BRIDGE_HOST.3 doxygen-doc/man/man3/HWLOC_OBJ_BRIDGE_PCI.3 doxygen-doc/man/man3/hwloc_obj_bridge_type_e.3 doxygen-doc/man/man3/hwloc_obj_bridge_type_t.3 doxygen-doc/man/man3/HWLOC_OBJ_OSDEV_BLOCK.3 doxygen-doc/man/man3/HWLOC_OBJ_OSDEV_DMA.3 doxygen-doc/man/man3/HWLOC_OBJ_OSDEV_GPU.3 doxygen-doc/man/man3/HWLOC_OBJ_OSDEV_NETWORK.3 doxygen-doc/man/man3/HWLOC_OBJ_OSDEV_OPENFABRICS.3 doxygen-doc/man/man3/HWLOC_OBJ_OSDEV_COPROC.3 doxygen-doc/man/man3/hwloc_obj_osdev_type_e.3 doxygen-doc/man/man3/hwloc_obj_osdev_type_t.3 doxygen-doc/man/man3/hwloc_compare_types.3 doxygen-doc/man/man3/hwloc_compare_types_e.3 doxygen-doc/man/man3/HWLOC_TYPE_UNORDERED.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_objects.3 doxygen-doc/man/man3/hwloc_obj.3 doxygen-doc/man/man3/hwloc_obj_t.3 doxygen-doc/man/man3/hwloc_obj_memory_s.3 doxygen-doc/man/man3/hwloc_obj_memory_s_hwloc_obj_memory_page_type_s.3 doxygen-doc/man/man3/hwloc_obj_attr_u.3 doxygen-doc/man/man3/hwloc_obj_attr_u_hwloc_bridge_attr_s.3 doxygen-doc/man/man3/hwloc_obj_attr_u_hwloc_cache_attr_s.3 doxygen-doc/man/man3/hwloc_obj_attr_u_hwloc_group_attr_s.3 doxygen-doc/man/man3/hwloc_obj_attr_u_hwloc_osdev_attr_s.3 doxygen-doc/man/man3/hwloc_obj_attr_u_hwloc_pcidev_attr_s.3 doxygen-doc/man/man3/hwloc_distances_s.3 doxygen-doc/man/man3/hwloc_obj_info_s.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_openfabrics.3 doxygen-doc/man/man3/hwloc_ibv_get_device_cpuset.3 doxygen-doc/man/man3/hwloc_ibv_get_device_osdev.3 doxygen-doc/man/man3/hwloc_ibv_get_device_osdev_by_name.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_syntheticexport.3 doxygen-doc/man/man3/hwloc_topology_export_synthetic.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_tinker.3 doxygen-doc/man/man3/hwloc_topology_insert_misc_object_by_cpuset.3 doxygen-doc/man/man3/hwloc_topology_insert_misc_object_by_parent.3 doxygen-doc/man/man3/HWLOC_RESTRICT_FLAG_ADAPT_DISTANCES.3 doxygen-doc/man/man3/HWLOC_RESTRICT_FLAG_ADAPT_IO.3 doxygen-doc/man/man3/HWLOC_RESTRICT_FLAG_ADAPT_MISC.3 doxygen-doc/man/man3/hwloc_restrict_flags_e.3 doxygen-doc/man/man3/hwloc_topology_restrict.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/usr/bin/install -c -m 644 doxygen-doc/man/man3/hwlocality_xmlexport.3 doxygen-doc/man/man3/hwloc_topology_export_xml.3 doxygen-doc/man/man3/hwloc_topology_export_xmlbuffer.3 doxygen-doc/man/man3/hwloc_free_xmlbuffer.3 doxygen-doc/man/man3/hwloc_topology_set_userdata_export_callback.3 doxygen-doc/man/man3/hwloc_export_obj_userdata.3 doxygen-doc/man/man3/hwloc_export_obj_userdata_base64.3 doxygen-doc/man/man3/hwloc_topology_set_userdata_import_callback.3 '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/man/man3'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/doc/hwloc'
    
    	/usr/bin/install -c -m 644 doxygen-doc/hwloc-a4.pdf doxygen-doc/hwloc-letter.pdf '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/doc/hwloc'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/hwloc'
    
    	/usr/bin/install -c -m 644 contrib/hwloc-valgrind.supp '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/share/hwloc'
    
    	/bin/mkdir -p '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/lib/pkgconfig'
    
    	/usr/bin/install -c -m 644 hwloc.pc '/home/jenkins/workspace/EinsteinToolkit/configs/sim/scratch/external/hwloc/lib/pkgconfig'
    
    	~/workspace/EinsteinToolkit/configs/sim/scratch
    
    	hwloc: Cleaning up...
    
    	hwloc: Done.
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_Sources.F90
    
    	COMPILING ExternalLibraries/hwloc/src/version.c
    
    	In file included from /home/jenkins/workspace/EinsteinToolkit/configs/sim/bindings/include/hwloc/cctk.h:7:0,
    
    	from /home/jenkins/workspace/EinsteinToolkit/configs/sim/build/hwloc/version.c:3:
    
    	/home/jenkins/workspace/EinsteinToolkit/configs/sim/build/hwloc/version.c: In function 'hwloc_version':
    
    	/home/jenkins/workspace/EinsteinToolkit/configs/sim/build/hwloc/version.c:11:34: error: 'buildtime_api_versionx' undeclared (first use in this function)
    
    	CCTK_VINFO("API version 0x%x", buildtime_api_versionx);
    
    	^
    
    	/home/jenkins/workspace/EinsteinToolkit/src/include/cctk_core.h:398:53: note: in definition of macro 'CCTK_VINFO'
    
    	#define CCTK_VINFO(...) CCTK_VInfo(CCTK_THORNSTRING,__VA_ARGS__)
    
    	^
    
    	/home/jenkins/workspace/EinsteinToolkit/configs/sim/build/hwloc/version.c:11:34: note: each undeclared identifier is reported only once for each function it appears in
    
    	CCTK_VINFO("API version 0x%x", buildtime_api_versionx);
    
    	^
    
    	/home/jenkins/workspace/EinsteinToolkit/src/include/cctk_core.h:398:53: note: in definition of macro 'CCTK_VINFO'
    
    	#define CCTK_VINFO(...) CCTK_VInfo(CCTK_THORNSTRING,__VA_ARGS__)
    
    	^
    
    	/home/jenkins/workspace/EinsteinToolkit/configs/sim/config-data/make.config.rules:264: recipe for target 'version.c.o' failed
    
    	make[3]: *** [version.c.o] Error 1
    
    	/home/jenkins/workspace/EinsteinToolkit/lib/make/make.thornlib:112: recipe for target 'make.checked' failed
    
    	make[2]: *** [make.checked] Error 2
    
    	/home/jenkins/workspace/EinsteinToolkit/lib/make/make.configuration:179: recipe for target '/home/jenkins/workspace/EinsteinToolkit/configs/sim/lib/libthorn_hwloc.a' failed
    
    	make[1]: *** [/home/jenkins/workspace/EinsteinToolkit/configs/sim/lib/libthorn_hwloc.a] Error 2
    
    	make[1]: *** Waiting for unfinished jobs....
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_SetMask.F90
    
    	COMPILING configs/sim/bindings/build/EHFinder/cctk_ThornBindings.c
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_SetSym.F90
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_ReadData.F90
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_Check.F90
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_Integrate.F90
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_FindSurface.F90
    
    	/home/jenkins/workspace/EinsteinToolkit/configs/sim/build/EHFinder/EHFinder_FindSurface.f90:1333:0:
    
    	
    
    	drsurf = two * min_delta
    
    	^
    
    	Warning: 'min_delta' may be used uninitialized in this function [-Wmaybe-uninitialized]
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_IsoSurface_optimized.F90
    
    	f951: Warning: iteration 15 invokes undefined behavior [-Waggressive-loop-optimizations]
    
    	/home/jenkins/workspace/EinsteinToolkit/configs/sim/build/EHFinder/EHFinder_IsoSurface_optimized.f90:401:0:
    
    	
    
    	do j=241,257
    
    	^
    
    	note: containing loop
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_Generator_Sources.F90
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_Generator_Sources2.F90
    
    	COMPILING EinsteinAnalysis/EHFinder/src/EHFinder_ReInitialize.F90
    
    	Updating /home/jenkins/workspace/EinsteinToolkit/configs/sim/lib/libthorn_EHFinder.a
    
    	Makefile:259: recipe for target 'sim' failed
    
    	make: *** [sim] Error 2
    
    	Build step 'Execute shell' marked build as failure
    
    	Archiving artifacts
    
    	Recording test results
    
    	ERROR: Step ?Publish JUnit test result report? failed: Test reports were found but none of them are new. Did leafNodes run?
    
    	For example, /home/jenkins/workspace/EinsteinToolkit/testresults.xml is 2 days 23 hr old
    
    	
    
    	IRC notifier plugin: Sending notification to: #cactus
    
    	IRC notifier plugin: [ERROR] not connected. Cannot send message to '#cactus'
    
    	Started calculate disk usage of build
    
    	Finished Calculation of disk usage of build in 0 seconds
    
    	Started calculate disk usage of workspace
    
    	Finished Calculation of disk usage of workspace in  8 second
    
    	Email was triggered for: Failure - 1st
    
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    	Sending email for trigger: Failure - 1st