#2598: thornyflat - production run segmentation fault
| Reporter: | Maria |
| Status: | new |
| Milestone: | |
| Version: | ET_2021_11 |
| Type: | bug |
| Priority: | major |
| Component: |
Simfactory scripts for ThornyFlat give segmentation fault in production run. I am attaching the cfg, ini, run and sub scripts.
In the simulations directory, the SIMFACTORY directory does not have inside the subdirectories: exe, cfg, run and par and NODES is empty. The only file is the properties.ini, which includes:
____
Loading torque version 6.1.3 : dev/torque/6.1.3
Loading openmpi version 4.1.2_gcc112 : parallel/openmpi/4.1.2_gcc112
Loading openblas version 0.3.19_gcc112 : libs/openblas/0.3.19_gcc112
+ set -e
+ cd /scratch/mbh0012/simulations/bnsG2/output-0000-active
+ echo Checking:
+ pwd
+ hostname
+ date
+ cat
+ echo Environment:
+ export GMON_OUT_PREFIX=gmon.out
+ GMON_OUT_PREFIX=gmon.out
+ export CACTUS_NUM_PROCS=2
+ CACTUS_NUM_PROCS=2
+ export CACTUS_NUM_THREADS=20
+ CACTUS_NUM_THREADS=20
+ export OMP_NUM_THREADS=20
+ OMP_NUM_THREADS=20
+ env
+ sort
+ echo Starting:
++ date +%s
+ export CACTUS_STARTTIME=1642991790
+ CACTUS_STARTTIME=1642991790
+ mpiexec -n 2 -npernode 2 /scratch/mbh0012/simulations/bnsG2/SIMFACTORY/exe/cactus_nst -L 3 /scratch/mbh0012/simulations/bnsG2/output-0000/nsnstohmns.par
[trcis001:09698] *** Process received signal ***
[trcis001:09698] Signal: Segmentation fault (11)
[trcis001:09698] Signal code: (128)
[trcis001:09698] Failing at address: (nil)
[trcis001:09698] [ 0] /lib64/libpthread.so.0(+0xf630)[0x2b4fc7e60630]
[trcis001:09698] [ 1] /shared/software/parallel/openmpi/4.1.2_gcc112/lib/libopen-rte.so.40(orte_get_attribute+0x21)[0x2b4fc6f4b101]
[trcis001:09698] [ 2] /shared/software/parallel/openmpi/4.1.2
| attachment: | thornyflat.cfg |
| attachment: | thornyflat.ini |
| attachment: | thornyflat.run |
| attachment: | thornyflay.sub |
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Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2598/thornyflat-production-run-segmentation