#2772: Issues link against Kadath thorns and Intel MKL due to link ordering
Reporter:tootle
Status:open
Milestone:
Version:
Type:bug
Priority:major
Component:EinsteinToolkit thorn

Comment (by tootle):

@Roland Haas Indeed that worked! Here is the final version with minor modification:

diff --git a/src/detect.sh b/src/detect.sh
index 9f80ed6..3fe691b 100755
--- a/src/detect.sh
+++ b/src/detect.sh
@@ -82,16 +82,18 @@ KADATH_LIBS="kadath"

 echo "BEGIN MESSAGE"
 echo "KadathThorn: Detect settings - KADATH_DIR : ${KADATH_DIR}"
-echo "KadathThorn: Detect settings - KADATH_LIB_DIRS : ${KADATH_LIB_DIRS}"
-echo "KadathThorn: Detect settings - KADATH_LIBS : ${KADATH_LIBS}"
+echo "KadathThorn: Detect settings - KADATH_INC_DIRS : ${KADATH_INC_DIRS}"
+echo "KadathThorn: Detect settings - KADATH_LIB_DIRS : ${KADATH_LIB_DIRS} ${GSL_LIB_DIRS} ${FFTW3_LIB_DIRS} ${BLAS_LIB_DIRSS} ${LAPACK_LIB_DIRS} ${BOOST_LIB_DIRS}"
+echo "KadathThorn: Detect settings - KADATH_LIBS : ${KADATH_LIBS} ${GSL_LIBS} ${FFTW3_LIBS} ${BLAS_LIBS} ${LAPACK_LIBS} ${BOOST_LIBS}"
 echo "END MESSAGE"

 # Pass options to Cactus
 echo "BEGIN MAKE_DEFINITION"
 echo "KADATH_DIR      = ${KADATH_DIR}"
 echo "KADATH_INC_DIRS = ${KADATH_INC_DIRS}"
-echo "KADATH_LIB_DIRS = ${KADATH_LIB_DIRS}"
-echo "KADATH_LIBS     = ${KADATH_LIBS}"
+echo "KADATH_LIB_DIRS = ${KADATH_LIB_DIRS} ${GSL_LIB_DIRS} ${FFTW3_LIB_DIRS} ${BLAS_LIB_DIRSS} ${LAPACK_LIB_DIRS} ${BOOST_LIB_DIRS}"
+# keep the order like this, since MKL (LAPACK) can contain a (partial) FFTW3 which conflicts
+echo "KADATH_LIBS     = ${KADATH_LIBS} ${GSL_LIBS} ${

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Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2772/issues-link-against-kadath-thorns-and