I see an additional message

[jhellmer@comet-ln2 etk]$ ./GetComponents --verbose https://bitbucket.org/einsteintoolkit/manifest/raw/ET_2018_02/einsteintoolkit.th  > GetComponents.log

Use of uninitialized value $branch in concatenation (.) or string at ./GetComponents line 1559.

I was able to git clone 

git clone https://bitbucket.org/einsteintoolkit/einsteininitialdata.git Cactus/repos/einsteininitialdata

Successfully.  I tried to run GetComponents again to see if it would move the initialdata folder to the arrangements folder and create the symlinks, but I got the following

  1 components checked out.
  252 components updated.

  Unable to process EinsteinInitialData/DistortedBHIVP

Summary of Warnings:

Could not update einsteininitialdata. Could not stash local changes. Error message was 'fatal: unable to create threaded lstat
fatal: unable to create threaded lstat
fatal: unable to create threaded lstat
fatal: unable to create threaded lstat
fatal: unable to create threaded lstat
Cannot save the current worktree state
'.
  Time Elapsed: 0 minutes, 27 seconds

This home directory is on a CentOS 6.10 server.  I was able to do this successfully on an Ubuntu 16 VM.

Joe


On Sep 1, 2018, at 3:27 PM, Roland Haas <rhaas@illinois.edu> wrote:

Hello Joe,

this is probably an issue with the incomplete checkout before. You can
try and see if adding the --verbose option to GetComponentns gives any
useful help (in particular you would look out for error messages from
git).

Personally I would remove the directories repos/einsteininitialdata and
arrangements/EinsteinInitialData and re-run GetComponents (or the git
line that I suggested).

Yours,
Roland

I’m not sure why put I’m not getting that error anymore.

Now I get this

 Unable to process EinsteinInitialData/DistortedBHIVP

Summary of Warnings:

Could not checkout EinsteinInitialData/DistortedBHIVP, unable to switch to tag . Any existing symlinks to EinsteinInitialData/DistortedBHIVP will be broken
 Time Elapsed: 1 minutes, 9 seconds

Am I getting this because I’ve already tried to install once?

Joe Hellmers

On Aug 6, 2018, at 7:56 AM, Roland Haas <rhaas@illinois.edu> wrote:

Hello Joe,

sorry for the very long delay in responding. Is this issue still
occuring?

If have seen issues like this caused by old versions of OpenSSL
installed on clusters since github's https server by now requires at
least TLS v1.2 and some old clusters only support v1.1.

You can check this by running git manually like so:

git clone https://github.com/barrywardell/EinsteinExact.git/ <https://github.com/barrywardell/EinsteinExact.git/>

and if it responds like this:

error: error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tlsv1 alert protocol version while accessing...

then your version of OpenSSL is too old.

In that case I suggest to try and see if the cluster offers a newer
version of git or OpenSSL through its module system or, alternatively,
check out the code using GetComponents on your laptop/workstation and
transfer to the cluster using simfactory's sync command eg:

cd Cactus
simfactory/bin/sim sync bluewaters

Yours,
Roland

I’m loading the toolkit on the Comet Supercomputer at the San Diego Super Computing facility (SDSC).

When running the command

./GetComponents --parallel https://bitbucket.org/einsteintoolkit/manifest/raw/ET_2018_02/einsteintoolkit.th  

I’m getting the error below at the end.  I’m not sure if these errors are important or not.  If someone would be so kind as to let me know, it would be greatly appreciated.

Thank,
Joe Hellmers

Unable to process EinsteinExact/doc
Unable to process EinsteinExact/m
Unable to process EinsteinExact/tests
Unable to process EinsteinExact/EinsteinExact_Test
Unable to process EinsteinExact/GaugeWave
Unable to process EinsteinExact/KerrSchild
Unable to process EinsteinExact/Minkowski
Unable to process KrancNumericalTools/GenericFD
Unable to process EinsteinExact/ModifiedSchwarzschildBL
Unable to process EinsteinExact/ShiftedGaugeWave
Unable to process EinsteinExact/Vaidya2
Unable to process EinsteinInitialData/DistortedBHIVP
Unable to process GetComponents

Summary of Warnings:

Could not checkout module EinsteinExact/doc

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module EinsteinExact/m

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module EinsteinExact/tests

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module EinsteinExact/EinsteinExact_Test

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module EinsteinExact/GaugeWave

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module EinsteinExact/KerrSchild

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module EinsteinExact/Minkowski

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module KrancNumericalTools/GenericFD

fatal: unable to access 'https://github.com/ianhinder/Kranc.git/': SSL connect error

Could not checkout module EinsteinExact/ModifiedSchwarzschildBL

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module EinsteinExact/ShiftedGaugeWave

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout module EinsteinExact/Vaidya2

fatal: unable to access 'https://github.com/barrywardell/EinsteinExact.git/': SSL connect error

Could not checkout EinsteinInitialData/DistortedBHIVP, unable to switch to tag . Any existing symlinks to EinsteinInitialData/DistortedBHIVP will be broken
Could not checkout module GetComponents

fatal: unable to access 'https://github.com/gridaphobe/CRL.git/': SSL connect error

Time Elapsed: 1 minutes, 48 seconds




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My email is as private as my paper mail. I therefore support encrypting
and signing email messages. Get my PGP key from http://pgp.mit.edu .