Hi Ian,
I ran the following command
./simfactory/bin/sim build --mdbkey make 'make -j2' --thornlist=kranc.th with the attached Thornlist, which included the CT_Dust Kranc thorn, and then ran ./simfactory/bin/sim submit static_tov --parfile=par/static_tov_small.par --procs=1 --walltime=8:0:0 with the attached parameter file, which also includes CT_Dust , but when I look at the output in ~/simulations/static_tov/output-0003, the static_tov_small.par which I assume has been copied from the par directory has CT_Dust removed? The static_tov.out file also has no reference to CT_Dust. Can you see what I am doing wrong?
Hi,
sim submit not only creates a new simulation, but also continues existing simulations. The fact that you have an output-0003 means this is the 4th time you have submitted the same simulation. In that case, I don't know whether simfactory tries to update the parameter file. It really shouldn't accept the option without an error if it's just going to ignore it, but I wouldn't be surprised if it did. I suggest to delete the whole simulation and try again. You can also use
sim purge static_tov
which will do the deletion.