[Users] VisIt could not read from the file

Babiuc-Hamilton, Maria babiuc at marshall.edu
Thu Feb 3 09:09:42 CST 2011


Hello,

I have problems trying to visualize in visit the h5 files created with the new HDF and zlib thorns.
The errors are:

$ visit -debug-5
Running: gui2.2.0 -debug-5
Running: viewer2.2.0 -host 127.0.0.1 -port 5600 -debug-5 -geometry 1558x1150+362+25 -borders 24,5,5,5 -shift 5,25 -preshift 0,-1 -defer
Running: mdserver2.2.0 -host 127.0.0.1 -port 5601 -debug-5
HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 0:
  #000: H5L.c line 1184 in H5Literate(): link iteration failed
    major: Symbol table
    minor: Iteration failed
  #001: H5G.c line 1532 in H5G_iterate(): error iterating over links
    major: Symbol table
    minor: Iteration failed
  #002: H5Gobj.c line 599 in H5G_obj_iterate(): can't iterate over symbol table
    major: Symbol table
    minor: Iteration failed
  #003: H5Gstab.c line 506 in H5G_stab_iterate(): unable to protect symbol table heap
    major: Symbol table
    minor: Protected metadata error
  #004: H5HL.c line 360 in H5HL_protect(): unable to load heap
    major: Heap
    minor: Unable to load metadata into cache
  #005: H5AC.c line 1831 in H5AC_protect(): H5C_protect() failed.
    major: Object cache
    minor: Unable to protect metadata
  #006: H5C.c line 6160 in H5C_protect(): can't load entry
    major: Object cache
    minor: Unable to load metadata into cache
  #007: H5C.c line 10990 in H5C_load_entry(): unable to load entry
    major: Object cache
    minor: Unable to load metadata into cache
  #008: H5HLcache.c line 259 in H5HL_load(): bad heap free list
    major: Heap
    minor: Unable to load metadata into cache




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