[Users] VisIt could not read from the file

[Erik Schnetter]

Maria

These errors look severs. Were there other errors or warnings, e.g.
during startup? Is there e.g. a version mismatch between different
HDF5 libraries, or was there an error while writing this file? Can you
h5ls or h5dump this file?

-erik

On Thu, Feb 3, 2011 at 10:09 AM, Babiuc-Hamilton, Maria
<babiuc at marshall.edu> wrote:
> Hello,
>
> I have problems trying to visualize in visit the h5 files created with the new HDF and zlib thorns.
> The errors are:
>
> $ visit -debug-5
> Running: gui2.2.0 -debug-5
> Running: viewer2.2.0 -host 127.0.0.1 -port 5600 -debug-5 -geometry 1558x1150+362+25 -borders 24,5,5,5 -shift 5,25 -preshift 0,-1 -defer
> Running: mdserver2.2.0 -host 127.0.0.1 -port 5601 -debug-5
> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 0:
>  #000: H5L.c line 1184 in H5Literate(): link iteration failed
>    major: Symbol table
>    minor: Iteration failed
>  #001: H5G.c line 1532 in H5G_iterate(): error iterating over links
>    major: Symbol table
>    minor: Iteration failed
>  #002: H5Gobj.c line 599 in H5G_obj_iterate(): can't iterate over symbol table
>    major: Symbol table
>    minor: Iteration failed
>  #003: H5Gstab.c line 506 in H5G_stab_iterate(): unable to protect symbol table heap
>    major: Symbol table
>    minor: Protected metadata error
>  #004: H5HL.c line 360 in H5HL_protect(): unable to load heap
>    major: Heap
>    minor: Unable to load metadata into cache
>  #005: H5AC.c line 1831 in H5AC_protect(): H5C_protect() failed.
>    major: Object cache
>    minor: Unable to protect metadata
>  #006: H5C.c line 6160 in H5C_protect(): can't load entry
>    major: Object cache
>    minor: Unable to load metadata into cache
>  #007: H5C.c line 10990 in H5C_load_entry(): unable to load entry
>    major: Object cache
>    minor: Unable to load metadata into cache
>  #008: H5HLcache.c line 259 in H5HL_load(): bad heap free list
>    major: Heap
>    minor: Unable to load metadata into cache
>
>
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-- 
Erik Schnetter <schnetter at cct.lsu.edu>   http://www.cct.lsu.edu/~eschnett/