[Users] problem with first example simulation with ETK
Jose Fiestas Iquira
jafiestas at lbl.gov
Tue Jan 10 18:31:48 CST 2012
Dear ETK users,
I am trying to run the ETK example as in
Since /scratch/ettest24/simulations could not be find I created it.
Now, after submission of the script with:
$ ./simfactory/bin/sim submit static_tov --parfile=par/static_tov.par
it gives me, for example:
$ Assigned restart id: 3
Executing submit command: qsub
(I submitted it for the 3. time)
$ ./simfactory/bin/sim list-simulations
$ static_tov [ACTIVE (FINISHED), restart 0003, job id -1]
But I can not visualize the data, if present. Because:
~/scratch/simulations/static_tov/output-0000/static_tov (as in the
tutorial) does not exist.
But it exists in my user directory:
only any .asc file exists. So, I can not visualize the example (if run ...)
Few questions about the tutorial:
- Do I need a create a script for the example? Or is created automatically?
- How long should it take the example? Is it possible it is still running?
- Is ssh -Y qb.loni.org a typo? should be -X
Thank you and regards,
On Tue, Dec 13, 2011 at 4:45 PM, Jose Fiestas Iquira <jafiestas at lbl.gov> wrote:
> Dear colleagues,
> I am a new ETK user and am running my first example simulation as described here
> I could not finish the example after:
> ./simfactory/bin/sim submit static_tov --parfile=par/static_tov.par
> --procs=32 --walltime=8:0:0
> with the following error message:
> Parameter file: /home/ettest24/Cactus/par/static_tov.par
> Error: could not access simulation base directory
> /scratch/ettest24/simulations for reading and writing
> Aborting Simfactory.
> Probably my LONI account is not completely set, or need to copy some
> data in /scratch/ettest24/simulations/ which does not exist?
> Would appreciate any help.
> All the best,
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