[Users] ET_2013_11 run performance

Ian Hinder ian.hinder at aei.mpg.de
Fri Jan 24 08:20:14 CST 2014


On 24 Jan 2014, at 12:42, Luca Baiotti <baiotti at ile.osaka-u.ac.jp> wrote:

> On 1/24/14 6:42 PM, Ian Hinder wrote:
>> 
>> On 24 Jan 2014, at 01:15, Luca Baiotti <baiotti at ile.osaka-u.ac.jp
>> <mailto:baiotti at ile.osaka-u.ac.jp>> wrote:
>> 
>>> On 1/23/14 11:52 PM, Frank Loeffler wrote:
>>>> On Thu, Jan 23, 2014 at 10:11:40PM +0900, Luca Baiotti wrote:
>>>>> OK, so the emails not being sent is a known problem.
>>>>> 
>>>>> Here is the diff between my Gauss simfactory (emails working) and my
>>>>> Noether simfactory (emails not working). Both are repository versions.
>>>> 
>>>> Can you look at the difference of the post-processed SubmitScript files
>>>> of one simulation that did send emails, and one that didn't? You should
>>>> be able to find them in simulations/NAME/output-0000/SIMFACTORY/ .
>>> 
>>> It is below. Indeed non --mail entry is present in the Noether file.
>> 
>> The Gauss version looks like this:
>>> #! /bin/bash
>>> #SBATCH -A @ALLOCATION@
>>> #SBATCH -p @QUEUE@
>>> #SBATCH -t @WALLTIME@
>>> #SBATCH -N @NODES@ -n @NUM_PROCS@
>>> #SBATCH @("@CHAINED_JOB_ID@" != "" ? "-d afterany:@CHAINED_JOB_ID@" : "")@
>>> #SBATCH -J @SHORT_SIMULATION_NAME@
>>> #SBATCH --mail-type=ALL
>>> #SBATCH -o @RUNDIR@/@SIMULATION_NAME at .out
>>> #SBATCH -e @RUNDIR@/@SIMULATION_NAME at .err
>>> cd @SOURCEDIR@
>>> @SIMFACTORY@ run @SIMULATION_NAME@ --machine=@MACHINE@ --restart-id=@RESTART_ID@ @FROM_RESTART_COMMAND@
>> 
>> If you have anything different, then maybe you added it yourself?  Can
>> do do an "svn diff" on the submit script in your Gauss version?  I think
>> what has happened is that you fixed the problem in your Gauss version by
>> adding the lines
>> 
>> #SBATCH --mail-user=baiotti at ile.osaka-u.ac.jp
>> <mailto:mail-user=baiotti at ile.osaka-u.ac.jp>
>> 
>> This would explain why mail notifications are not working for me: they
>> have never worked in the committed version.
> 
> You are right! I had modified it long ago and forgot. Then I assumed that simfactory worked properly on its own... And to complicate things, I had recently removed the original simfactory directory in my Cactus_Gauss and checked out a new one (so svn diff didn't show any difference).
> 
> In conclusion, can the script for stampede be fixed in the repository?

I have changed it in my version, so if it works the next time I submit something, I'll commit it to the repository.

-- 
Ian Hinder
http://numrel.aei.mpg.de/people/hinder

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