[Users] Problem with reproducing the NsNsToHMNS
Roland Haas
rhaas at illinois.edu
Wed Oct 24 10:46:03 CDT 2018
Hello Hassan,
all warnings that are level 1 and higher can be ignored (high level
means a lower priority warning).
Only level 0 are actually errors. Level 2 and higher are usually "stuff
that we'd want to let you know but that will not cause any averse
effects", such as the " No HDF5 checkpoint files with basefilename
'checkpoint.chkpt' found" that is output for the first segment of a simulation.
The one "Could not register parameter change monitor for
'signal_numbers'" is a bit more puzzling since this should not happen (it is perfectly harmless though).
Does your simulation actually proceed or does it abort with a level 0
warning or similar issue?
Yours,
Roland
> Dear all,
>
> I need some guidance on reproducing the NsNsToHMNS which is provided in
> the gallery section of ET's website.
> but there are a bunch of warnings during the simulation.
>
> I would be grateful if anyone could possibly tell me what is the minimum
> limit on core numbers for the NsNs and also check the warnings below.
>
> I tried with 4 procs at first , but now I am trying on 28 procs. but
> there are same warnings.
> I don't know if I have to take them serious or not !
> Because even with these warnings, the simulation is still running...
>
>
> Gratefully,
> Hassan
>
>
>
>
> *****Here are all warnings***** :
>
>
> Warning: thorn CoordBase already scheduled for activation
>
>
>
> WARNING level 3 from host compute-0-46.local process 0
> while executing schedule bin (none), routine (no thorn)::(no routine)
> in thorn IOUtil, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/IOUtil/CheckpointRecovery.cc:730:
> -> No HDF5 checkpoint files with basefilename 'checkpoint.chkpt' found
> in recovery directory 'NsNs'
>
>
>
>
>
>
> Formaline::Formaline_RegisterWarnings: [meta] Register to receive warnings
> and info messages from the flesh
>
>
>
>
>
> WARNING level 3 from host compute-0-46.local process 0
> while executing schedule bin CCTK_STARTUP, routine
> TerminationTrigger::TerminationTrigger_StartSignalHandler
> in thorn TerminationTrigger, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/TerminationTrigger/signal.c:64:
> -> Could not register parameter change monitor for 'signal_numbers'
> INFO (Vectors): Using vector size 2 for architecture SSE2 (64-bit precision)
>
>
>
>
>
>
> INFO (Formaline): Writing tarballs with the Cactus sources into the
> directory "NsNs/cactus-source"
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:15:
> -> Forcing ML_BSSN::initial_boundary_condition="extrapolate-gammas"
> because ML_BSSN::my_initial_boundary_condition="extrapolate-gammas"
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:28:
> -> Forcing ML_BSSN::rhs_boundary_condition="NewRad" because
> ML_BSSN::my_rhs_boundary_condition="NewRad"
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:47:
> -> Forcing ML_BSSN::epsDiss=0.0 because ML_BSSN::apply_dissipation="never"
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:116:
> -> Forcing ML_BSSN::advectLapse=1 because ML_BSSN::LapseAdvectionCoeff=1.0
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:134:
> -> Forcing ML_BSSN::advectShift=1 because ML_BSSN::ShiftAdvectionCoeff=1.0
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:150:
> -> Parameter ML_BSSN::my_initial_data is outdated; please update the
> parameter file. Do not use this parameter, and set up initial conditions
> via ADMBase as usual.
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:157:
> -> Parameter ML_BSSN::my_initial_boundary_condition is outdated; please
> update the parameter file. Do not use this parameter, and set up initial
> boundary conditions as usual.
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:164:
> -> Parameter ML_BSSN::my_rhs_boundary_condition is outdated; please
> update the parameter file. Do not use this parameter, and set up RHS
> boundary conditions as usual.
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:171:
> -> Parameter ML_BSSN::my_boundary_condition is outdated; please update
> the parameter file. Do not use this parameter, and set up RHS boundary
> conditions as usual.
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:198:
> -> Parameter ML_BSSN::LapseAdvectionCoeff is outdated; please update the
> parameter file. Instead of using this parameter, you should set
> ML_BSSN::advectLapse.
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:204:
> -> Parameter ML_BSSN::ShiftAdvectionCoeff is outdated; please update the
> parameter file. Instead of using this parameter, you should set
> ML_BSSN::advectShift.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:15:
> -> Forcing ML_BSSN::initial_boundary_condition="extrapolate-gammas"
> because ML_BSSN::my_initial_boundary_condition="extrapolate-gammas"
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:28:
> -> Forcing ML_BSSN::rhs_boundary_condition="NewRad" because
> ML_BSSN::my_rhs_boundary_condition="NewRad"
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:47:
> -> Forcing ML_BSSN::epsDiss=0.0 because ML_BSSN::apply_dissipation="never"
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:15:
> -> Forcing ML_BSSN::initial_boundary_condition="extrapolate-gammas"
> because ML_BSSN::my_initial_boundary_condition="extrapolate-gammas"
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:28:
> -> Forcing ML_BSSN::rhs_boundary_condition="NewRad" because
> ML_BSSN::my_rhs_boundary_condition="NewRad"
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:47:
> -> Forcing ML_BSSN::epsDiss=0.0 because ML_BSSN::apply_dissipation="never"
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:116:
> -> Forcing ML_BSSN::advectLapse=1 because ML_BSSN::LapseAdvectionCoeff=1.0
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:116:
> -> Forcing ML_BSSN::advectLapse=1 because ML_BSSN::LapseAdvectionCoeff=1.0
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:134:
> -> Forcing ML_BSSN::advectShift=1 because ML_BSSN::ShiftAdvectionCoeff=1.0
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_WRAGH, routine
> ML_BSSN_Helper::ML_BSSN_ParamCompat
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:134:
> -> Forcing ML_BSSN::advectShift=1 because ML_BSSN::ShiftAdvectionCoeff=1.0
> INFO (MoL): Using Runge-Kutta 4 as the time integrator.
> INFO (SymBase): Symmetry on lower x-face: rotating_symmetry_180
> INFO (SymBase): Symmetry on lower z-face: reflection_symmetry
> INFO (MoL): The maximum number of evolved variables is 1250. 30 are
> registered.
> INFO (MoL): The maximum number of slow evolved variables is 1250. 0 are
> registered.
> INFO (MoL): The maximum number of constrained variables is 1250. 37 are
> registered.
> INFO (MoL): The maximum number of SandR variables is 1250. 0 are registered.
> INFO (MoL): The maximum number of evolved array variables is 1250. 0 are
> registered.
> INFO (MoL): The maximum number of constrained array variables is 1250. 0
> are registered.
> INFO (MoL): The maximum number of SandR array variables is 1250. 0 are
> registered.
> INFO (MoL): The maximum size of any array variables is 0.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:150:
> -> Parameter ML_BSSN::my_initial_data is outdated; please update the
> parameter file. Do not use this parameter, and set up initial conditions
> via ADMBase as usual.
> WARNING level 1 from host compute-0-46.local process 0
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:150:
> -> Parameter ML_BSSN::my_initial_data is outdated; please update the
> parameter file. Do not use this parameter, and set up initial conditions
> via ADMBase as usual.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:157:
> -> Parameter ML_BSSN::my_initial_boundary_condition is outdated; please
> update the parameter file. Do not use this parameter, and set up initial
> boundary conditions as usual.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:164:
> -> Parameter ML_BSSN::my_rhs_boundary_condition is outdated; please
> update the parameter file. Do not use this parameter, and set up RHS
> boundary conditions as usual.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:171:
> -> Parameter ML_BSSN::my_boundary_condition is outdated; please update
> the parameter file. Do not use this parameter, and set up RHS boundary
> conditions as usual.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:198:
> -> Parameter ML_BSSN::LapseAdvectionCoeff is outdated; please update the
> parameter file. Instead of using this parameter, you should set
> ML_BSSN::advectLapse.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:204:
> -> Parameter ML_BSSN::ShiftAdvectionCoeff is outdated; please update the
> parameter file. Instead of using this parameter, you should set
> ML_BSSN::advectShift.
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:157:
> -> Parameter ML_BSSN::my_initial_boundary_condition is outdated; please
> update the parameter file. Do not use this parameter, and set up initial
> boundary conditions as usual.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:164:
> -> Parameter ML_BSSN::my_rhs_boundary_condition is outdated; please
> update the parameter file. Do not use this parameter, and set up RHS
> boundary conditions as usual.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:171:
> -> Parameter ML_BSSN::my_boundary_condition is outdated; please update
> the parameter file. Do not use this parameter, and set up RHS boundary
> conditions as usual.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:198:
> -> Parameter ML_BSSN::LapseAdvectionCoeff is outdated; please update the
> parameter file. Instead of using this parameter, you should set
> ML_BSSN::advectLapse.
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin CCTK_PARAMCHECK, routine
> ML_BSSN_Helper::ML_BSSN_ParamCheck
> in thorn ML_BSSN_Helper, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:204:
> -> Parameter ML_BSSN::ShiftAdvectionCoeff is outdated; please update the
> parameter file. Instead of using this parameter, you should set
> ML_BSSN::advectShift.
>
>
>
>
>
>
>
>
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin Hydro_Analysis_LocationSearch, routine
> Hydro_Analysis::Hydro_Analysis_LocationSearch_Combine
> in thorn Hydro_Analysis, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/Hydro_Analysis/Hydro_Analysis.c:199:
> -> Found more than one (2) identical maximum, using average location
> (15.1875,0,0).
> WARNING level 1 from host compute-0-46.local process 1
> while executing schedule bin Hydro_Analysis_LocationSearch, routine
> Hydro_Analysis::Hydro_Analysis_LocationSearch_Combine
> in thorn Hydro_Analysis, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/Hydro_Analysis/Hydro_Analysis.c:199:
> -> Found more than one (2) identical maximum, using average location
> (15.1875,0,0).
> WARNING level 1 from host compute-0-46.local process 0
> while executing schedule bin Hydro_Analysis_LocationSearch, routine
> Hydro_Analysis::Hydro_Analysis_LocationSearch_Combine
> in thorn Hydro_Analysis, file
> /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/Hydro_Analysis/Hydro_Analysis.c:199:
> -> Found more than one (2) identical maximum, using average location
> (15.1875,0,0).
> INFO (NSTracker): Found star at (15.1875,0,0)
> INFO (CarpetIOHDF5):
> ---------------------------------------------------------
> INFO (CarpetIOHDF5): Dumping initial checkpoint at iteration 0, simulation
> time 0
> INFO (CarpetIOHDF5):
> ---------------------------------------------------------
> WARNING level 2 from host compute-0-46.local process 0
> while executing schedule bin CCTK_ANALYSIS, routine
> QuasiLocalMeasures::qlm_calculate
> in thorn QuasiLocalMeasures, file qlm_calculate.F90:130:
> -> There were not enough past time levels available for accurate
> calculations
> INFO (TimerReport): Timer Report at iteration 0 time 0
> INFO (TimerReport): Top timers at iteration 0 time 0
>
>
>
>
>
> -----------------------------------
> Hassan Khalvati
> Master Student
> Department of Physics
> Sharif University of Technology
> Tehran, Azadi
> Hassan.khalvati at physics.sharif.edu
>
>
>
>
>
>
>
>
> _______________________________________________
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