[Users] x86_64 link-time errors on MacOS Mojave
Haas, Roland
rhaas at illinois.edu
Thu Jun 20 10:42:19 CDT 2019
Hello Bernard,
I am still in the process of trying to reproduce your error.
However one thing I noticed is that (yet again) Cactus needs a new
architecture file (once for each Apple update) and reports that darwin
18.6.0 is not a known architecture. This may be part of the reason for
failure.
You can fix this by doing:
cd repos/flesh/lib/make/known-architectures
cp darwin18.2.0 darwin18.6.0
I have pushed such architecture files into both the release branch and
master (just now).
Yours,
Roland
> Hi.
>
> I just downloaded the current stable ET release --- ET_2019_03 --- and
> am trying a simple from-scratch compilation on my MacOS machine
> running Mojave with Macports-supplied packages.
>
> I'm using the current osx-macports.cfg for my configuration, having
> installed the ports mentioned at the top of the file. What I'm seeing
> is a link-time failure involving the HDF5 libraries --- see below.
>
> Are there extra configuration steps I should be taking? Thanks, Bernard
>
> ----------- error output at end of compilation --------
>
> Undefined symbols for architecture x86_64:
>
> "_H5Aclose", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int const*,
> int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> ...
>
> "_H5Acreate1", referenced from:
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int const*,
> int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, unsigned
> long long const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char const*
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> ...
>
> "_H5Aget_space", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Aget_type", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Aopen_name", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Aread", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Awrite", referenced from:
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int const*,
> int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, unsigned
> long long const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char const*
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> ...
>
> "_H5Dclose", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteLargeAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Dcreate1", referenced from:
>
> CarpetIOHDF5::WriteLargeAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Dextend", referenced from:
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> "_H5Dget_space", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> "_H5Dget_storage_size", referenced from:
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> "_H5Dget_type", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Dopen1", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> "_H5Dread", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> "_H5Dwrite", referenced from:
>
> CarpetIOHDF5::WriteLargeAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Eauto_is_v2", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Eget_auto1", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Eget_auto2", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Eset_auto1", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Eset_auto2", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Fclose", referenced from:
>
> _CarpetIOHDF5_CloseFiles in libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Checkpoint(_cGH const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::CloseFile(_cGH const*, long long&, long
> long&) in libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Fcreate", referenced from:
>
> CarpetIOHDF5::Checkpoint(_cGH const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 0> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<1>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 1> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 2> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Fis_hdf5", referenced from:
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 0> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<1>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 1> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 2> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<3>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 3> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> "_H5Fopen", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 0> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<1>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 1> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Gclose", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteMetadata(_cGH const*, int, int, int, bool,
> long long) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5Gcreate1", referenced from:
>
> CarpetIOHDF5::WriteMetadata(_cGH const*, int, int, int, bool,
> long long) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5Gget_objinfo", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> "_H5Giterate", referenced from:
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Gopen1", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Gunlink", referenced from:
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<3>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 3> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<1>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 1> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5P_CLS_DATASET_CREATE_ID_g", referenced from:
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<3>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 3> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5P_CLS_DATASET_XFER_ID_g", referenced from:
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5P_CLS_FILE_ACCESS_ID_g", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Checkpoint(_cGH const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 0> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Pclose", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Checkpoint(_cGH const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Pcreate", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Checkpoint(_cGH const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Pget_edc_check", referenced from:
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Pset_chunk", referenced from:
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<3>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 3> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Pset_deflate", referenced from:
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<3>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 3> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<1>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 1> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Pset_edc_check", referenced from:
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Pset_fapl_core", referenced from:
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> "_H5Pset_fclose_degree", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Checkpoint(_cGH const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::OpenFile(_cGH const*, int, int, int,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, std::__cxx11::basic_string<char,
> std::char_traits<char>, std::allocator<char> >, CarpetLib::vect<int,
> 0> const&, bool, bool, long long&, long long&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Pset_filter", referenced from:
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<3>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 3> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<1>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 1> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Pset_shuffle", referenced from:
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<3>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 3> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<1>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 1> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Sclose", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int const*,
> int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> ...
>
> "_H5Screate", referenced from:
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteLargeAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> AHFinderDirect::WriteAttribute(long long, char const*, char
> const*, int) [clone .constprop.195] in
> libthorn_AHFinderDirect.a(patch_system.cc.o)
>
> "_H5Screate_simple", referenced from:
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int const*,
> int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, unsigned
> long long const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char const*
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Sget_select_npoints", referenced from:
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Sget_simple_extent_dims", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> "_H5Sget_simple_extent_ndims", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Sget_simple_extent_npoints", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Sselect_hyperslab", referenced from:
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 2> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5T_C_S1_g", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char const*
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteLargeAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> AHFinderDirect::WriteAttribute(long long, char const*, char
> const*, int) [clone .constprop.195] in
> libthorn_AHFinderDirect.a(patch_system.cc.o)
>
> "_H5T_NATIVE_DOUBLE_g", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::SetupGH(tFleshConfig*, int, _cGH*) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5T_NATIVE_FLOAT_g", referenced from:
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::SetupGH(tFleshConfig*, int, _cGH*) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5T_NATIVE_HSIZE_g", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, unsigned
> long long const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> "_H5T_NATIVE_INT16_g", referenced from:
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5T_NATIVE_INT32_g", referenced from:
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5T_NATIVE_INT64_g", referenced from:
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5T_NATIVE_INT8_g", referenced from:
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5T_NATIVE_INT_g", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int const*,
> int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> "_H5T_NATIVE_LDOUBLE_g", referenced from:
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::SetupGH(tFleshConfig*, int, _cGH*) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5T_NATIVE_SCHAR_g", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5Tclose", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char const*
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteLargeAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5Tcopy", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char const*
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteLargeAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> AHFinderDirect::WriteAttribute(long long, char const*, char
> const*, int) [clone .constprop.195] in
> libthorn_AHFinderDirect.a(patch_system.cc.o)
>
> "_H5Tcreate", referenced from:
>
> CarpetIOHDF5::SetupGH(tFleshConfig*, int, _cGH*) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5Tget_class", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> "_H5Tget_size", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedSequential(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarChunkedParallel(_cGH const*, long long,
> double&, ioRequest const*, bool, long long) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::WriteHDF5(_cGH const*, long long&, long
> long&, std::vector<CarpetLib::gdata*,
> std::allocator<CarpetLib::gdata*> >, CarpetLib::bbox<int, 3> const&,
> int, CarpetLib::vect<int, 3> const&, CarpetLib::vect<int, 0> const&,
> int, int, int, int, int, int, double, CarpetLib::vect<double, 3>
> const&, CarpetLib::vect<double, 3> const&) in
> libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5Tinsert", referenced from:
>
> CarpetIOHDF5::SetupGH(tFleshConfig*, int, _cGH*) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> "_H5Tset_size", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, char const*
> const*, int) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteLargeAttribute(long long, char const*, char
> const*) in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::AddAttributes(_cGH const*, char const*, int, int,
> ioRequest const*, CarpetLib::bbox<int, 3> const&, long long, bool) in
> libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> AHFinderDirect::WriteAttribute(long long, char const*, char
> const*, int) [clone .constprop.195] in
> libthorn_AHFinderDirect.a(patch_system.cc.o)
>
> "_H5check_version", referenced from:
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Checkpoint(_cGH const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> Multipole_OutputComplexToH5File(_cGH*, Multipole::variable_desc
> const*, double const*, Multipole::mode_array const&) in
> libthorn_Multipole.a(utils.cc.o)
>
> CarpetIOHDF5::WriteVarUnchunked(_cGH const*, long long, double&,
> ioRequest const*, bool) in libthorn_CarpetIOHDF5.a(Output.cc.o)
>
> ...
>
> "_H5garbage_collect", referenced from:
>
> _CarpetIOHDF5_CloseFiles in libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Checkpoint(_cGH const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::OutputVarAs(_cGH const*, char const*, char const*)
> in libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::IOHDF5<0>::CloseFile(_cGH const*, long long&, long
> long&) in libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<1>::CloseFile(_cGH const*, long long&, long
> long&) in libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> CarpetIOHDF5::IOHDF5<2>::CloseFile(_cGH const*, long long&, long
> long&) in libthorn_CarpetIOHDF5.a(OutputSlice.cc.o)
>
> ...
>
> "_H5open", referenced from:
>
> CarpetIOHDF5::BrowseDatasets(long long, char const*, void*) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::OpenFileSet(_cGH const*,
> std::__cxx11::basic_string<char, std::char_traits<char>,
> std::allocator<char> >, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::ReadVar(_cGH const*, CarpetIOHDF5::file_t&,
> double&, std::_List_const_iterator<CarpetIOHDF5::patch_t>,
> std::vector<CarpetLib::bboxset2::bboxset<int, 3>,
> std::allocator<CarpetLib::bboxset2::bboxset<int, 3> > >&, bool) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::Recover(_cGH*, char const*, int) in
> libthorn_CarpetIOHDF5.a(Input.cc.o)
>
> CarpetIOHDF5::CCTKtoHDF5_Datatype(_cGH const*, int, bool) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, int) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> CarpetIOHDF5::WriteAttribute(long long, char const*, double) in
> libthorn_CarpetIOHDF5.a(CarpetIOHDF5.cc.o)
>
> ...
>
> ld: symbol(s) not found for architecture x86_64
>
> collect2: error: ld returned 1 exit status
>
> make[1]: *** [/Users/bjkelly1/nobackup/codes/Cactus/exe/cactus_sim] Error 1
>
> make: *** [sim] Error 2
>
>
--
My email is as private as my paper mail. I therefore support encrypting
and signing email messages. Get my PGP key from http://pgp.mit.edu .
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