[Users] Possible performance issue

[Haas, Roland]

Hello Vaishak,

> I have made the changes as suggested. In fact I compiled using a Intel MPI
> ( which was compiled by myself locally) using the optionlist of Stanpede 2
> cluster as suggested by you , without OpenMP and with appropriate library
> paths.I am glad that the speed has improved. I am now getting around 25
> physical units per hour instead of 1.5 for a simulation running on 128 mpi
> procs. 
Glad to hear that.

> The optimization parameters I am using are same as in the Stanpede2
> cluster ( -Ofast -march=native) and not "-O3 -march=native" . Would it make
> any difference?
-Ofast can be faster than -O3 (likely it is) at the cost of reducing
gcc's adherence to the IEEE floating point standard for C/C++.
Basically it allows gcc to perform value unsafe optimizations (see
https://gcc.gnu.org/wiki/FloatingPointMath) eg turning a+(b+c) into
(a+b)+c or assuming that no infinities or NaNs will happen.

These optimizations are often fine (and the Intel compiler performs a
subset of these by default) but can occasionally (see
https://bitbucket.org/einsteintoolkit/tickets/issues/2119/the-binary-neutron-star-gallery-example#comment-54050358) lead to unexpected results.

You should be fine using them I would think. Though you may want to run
at least one simulation with both options and compare results.

> I have not tried these changes on mpich-3.3.1 or openmpi yet.
If Intel MPI works for you, then using it is fine.

> Also where can I find more information to know about these optimization
> parameters?
The gcc wiki link I provided above has an discussion about what floating
point optimization parameters the compiler offers. There's also
https://gcc.gnu.org/onlinedocs/gcc/Optimize-Options.html which goes
into great detail.

If you need the last bit of performance you can also set NDEBUG=1
(which disables assert() statements) and CARPET_OPTIMIZE=1 in your
CPPFLAGS which will skip some internal consistency checks in Carpet,
and you can try and turn of Carpet's poisoning of uninitialized data
(see the poison parameters in Carpet and CarpetLib's param.ccl files).

For options that you can set in the option list, I would try and have a
look at:
https://docs.einsteintoolkit.org/et-docs/Configuring_a_new_machine and the references therein.

> Thankyou very much for your time. This was really helpful!!
No problem.

Yours,
Roland

-- 
My email is as private as my paper mail. I therefore support encrypting
and signing email messages. Get my PGP key from http://pgp.mit.edu .
-------------- next part --------------
A non-text attachment was scrubbed...
Name: not available
Type: application/pgp-signature
Size: 833 bytes
Desc: OpenPGP digital signature
Url : http://lists.einsteintoolkit.org/pipermail/users/attachments/20191008/2c1375bb/attachment.bin