[Users] issue of compilation of ETK on Ubuntu 18.04

[Federico Cipolletta]

Hello Roland,

thank you very much for your answe.

Il giorno lun 17 feb 2020 alle ore 21:12 Roland Haas <rhaas at illinois.edu>
ha scritto:

> Hello Federico,
>
> this is just a guess: issues with Fortran modules, can be caused by
> updates of the Fortran compiler (since they are specific to the exact
> compiler version).
>

Yes, indeed it is what I was guessing but I cannot figure out what is going
on.


>
> The compiled Fortran modules are stored in the "configs/sim/scratch"
> directory and are removed (and then recompiled) by both the "clean" and
> the "realclean" targets.
>
> Can you try if you can compile after running:
>
> make sim-clean
>
> please (and then check before compiling that
> configs/ET/scratch/cctk.mod is not present)? Looking at your log file,
> this does not seem very likely to help (since you have "COMPILING
> CactusBase/Fortran/src/cctk.F90") but it may be worth a try at least.
>
> You may also want to check that there is no file named "cctk.mod"
> anywhere else (eg by running "find
> /home/federico/Documents/EinsteinToolkit/Cactus/ -name cctk.mod").
>

When I am doing the first compilation, I indeed getting a cctk.mod file in
configs/ET/scratch. I am attaching this file. After the clean flag I get
nothing when finding the cctk.mod file in the Cactus directory. However, if
I repeat the make ET command, I am getting an error related to hwloc,
namely:

Checking status of thorn hwloc
make[3]: *** No rule to make target
'/home/federico/Documents/EinsteinToolkit/Cactus/configs/ET/scratch/done/hwloc',
needed by 'make.checked'.  Stop.
/home/federico/Documents/EinsteinToolkit/Cactus/lib/make/make.thornlib:112:
recipe for target 'make.checked' failed
make[2]: *** [make.checked] Error 2
/home/federico/Documents/EinsteinToolkit/Cactus/lib/make/make.configuration:181:
recipe for target
'/home/federico/Documents/EinsteinToolkit/Cactus/configs/ET/lib/libthorn_hwloc.a'
failed
make[1]: ***
[/home/federico/Documents/EinsteinToolkit/Cactus/configs/ET/lib/libthorn_hwloc.a]
Error 2
Makefile:256: recipe for target 'ET' failed
make: *** [ET] Error 2


>
> The toolkit compiles on a freshly installed Ubuntu 18.04 VM for me (and
> with gcc 6, gcc 7, gcc 8, gcc 9 on my Debian Bullseye workstation), so
> there may be something odd going on.
>
> Would you mind attaching the file cctk.mod produced on your system as
> well as the machine ini file for WS03 (WS03.ini in
> simfactory/mdb/machines), please?
>

Sure, I attach the cctk.mod file of the first trial, the compilation2.out
of the second make and the WS03.ini files. Is there something I am missing?


>
> Yours,
> Roland
>

Thank you very much,
Federico.


>
> > Dear EinsteiToolkit user support,
> >
> > I am recently experiencing some issues compiling the ETK standard
> thornlist
> > (version "Mayer") on my Workstation with Ubuntu 18.04 as OS.
> >
> > Once I could compile the ETK (version "Tesla") correctly but after some
> > recent upgrades, I cannot compile any thornlist within my machine. So I
> > tried downloading the ETK most recent version (namely "Mayer) and build
> the
> > standar thornlist from scratch, but I am always getting the same error.
> >
> > I attach the compilation output of my last trial (namely the "ET"
> > configuration). In order to build the ET configuration, I used the
> > following command:
> >
> > ./simfactory/bin/sim build ET --machine=WS03 --thornlist=./thornlists/
> > einsteintoolkit.th >& compilation.out
> >
> > The WS03 machine was defined by me in a "standard" way, and the WS03.ini
> > file is calling the generic.cfg, generic.run and generic.sub files.
> >
> > The current version of gcc, g++, gfortran and cpp compilers that I am
> using
> > are the 7.4.0 GNU ones, although I tried also the 5.5 and 8.3 ones
> (always
> > getting the same error). In order to set the version of the compiler, I
> am
> > currently using the following command (for gcc - for the other compiler
> it
> > is equivalent):
> >
> > sudo update-alternatives --config gcc
> >
> > As you can see, the last lines in the compilation.out files are the
> > following:
> >
> > Checking status of thorn CalcK
> > COMPILING EinsteinAnalysis/CalcK/src/CalcK.F90
> > f951: Fatal Error: Reading module ‘cctk’ at line 1310 column 20:
> Unexpected
> > EOF
> > compilation terminated.
> >
> /home/federico/Documents/EinsteinToolkit/Cactus/configs/ET/config-data/make.config.rules:409:
> > recipe for target 'CalcK.F90.o' failed
> > make[3]: *** [CalcK.F90.o] Error 1
> >
> /home/federico/Documents/EinsteinToolkit/Cactus/lib/make/make.thornlib:112:
> > recipe for target 'make.checked' failed
> > make[2]: *** [make.checked] Error 2
> >
> /home/federico/Documents/EinsteinToolkit/Cactus/lib/make/make.configuration:181:
> > recipe for target
> >
> '/home/federico/Documents/EinsteinToolkit/Cactus/configs/ET/lib/libthorn_CalcK.a'
> > failed
> > make[1]: ***
> >
> [/home/federico/Documents/EinsteinToolkit/Cactus/configs/ET/lib/libthorn_CalcK.a]
> > Error 2
> > Makefile:256: recipe for target 'ET' failed
> > make: *** [ET] Error 2
> >
> > Do you have any suggestions for me?
> >
> > Best regards,
> > Federico Cipolletta.
>
>
>
> --
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>
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