[Users] M1 Mac Compiling error

Roland Haas rhaas at illinois.edu
Wed May 25 10:20:03 CDT 2022


Hello David,

looking at your included output somehow clang got involved. 

We do not actually document (or support) compiling the ET using clang
on a mac. 

Last I heard was that someone did manage to compile the ET with the
latest release on a M1 mac using one of HomeBrew or MacPorts
(installing the packages listed at the top of:
https://github.com/nds-org/jupyter-et/blob/master/tutorial-server/notebooks/CactusTutorial.ipynb in the Prerequisites section).

Did you give that a try already?

Yours,
Roland

> I’ve tried building from scratch several times using the real clean option between builds.  This is happening on 2 different computers and has been going on for weeks.
> 
> -DG
> --
> David Garrison, Ph.D.
> Associate Dean for the College of Science and Engineering,
> Professor and Founding Chair of Physics
> University of Houston-Clear Lake
> Bayou 3611/STEM 2252
> Houston, TX 77058
> 
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> "If we knew what it was we were doing, it would not be called research, would it?" — Albert Einstein.
> 
> 
> 
> 
> On May 5, 2022, at 12:45 PM, Erik Schnetter <schnetter at gmail.com<mailto:schnetter at gmail.com>> wrote:
> 
> David
> 
> Superficially, this looks as if a file was miscompiled. This might
> happen if you interrupt a build, and an incomplete object file is left
> over. The next build might not detect this.
> 
> Starting a new build from scratch would then resolve this.
> 
> -erik
> 
> 
> On Wed, May 4, 2022 at 4:35 PM Garrison, David <Garrison at uhcl.edu<mailto:Garrison at uhcl.edu>> wrote:
> 
> Hello,
> 
> I keep getting the errors below when I try to compile my ETK code on my M1 Macs. Any ideas on how to correct this?
> 
> Updating /Users/garrison/Applications/Cactus/configs/specgrmhd/lib/libthorn_CactusBindings.a
> Creating cactus_specgrmhd in /Users/garrison/Applications/Cactus/exe from CactusBase/Boundary CactusBase/CartGrid3D CactusBase/CoordBase CactusBase/Fortran CactusBase/IOASCII CactusBase/IOBasic CactusBase/IOUtil CactusBase/InitBase CactusNumerical/InterpToArray CactusNumerical/LocalInterp2 CactusNumerical/LocalReduce SpecCosmo/MHD_Analysis SpecCosmo/MHD_INIT ExternalLibraries/MPI SpecCosmo/MoL CactusUtils/NaNChecker CactusUtils/Nice CactusNumerical/Noise CactusNumerical/Norms CactusPUGH/PUGH CactusPUGH/PUGHInterp CactusPUGH/PUGHReduce CactusPUGH/PUGHSlab CactusNumerical/Periodic CactusNumerical/Slab SpecCosmo/SpecGRMHD CactusBase/SymBase CactusUtils/SystemStatistics CactusBase/Time CactusUtils/TimerReport CactusUtils/Vectors ExternalLibraries/zlib
> Undefined symbols for architecture arm64:
> "_analysis1_", referenced from:
> _CCTKi_BindingsSchedule_MHD_Analysis in ScheduleMHD_Analysis.c.o
> "_analysis2_", referenced from:
> _CCTKi_BindingsSchedule_MHD_Analysis in ScheduleMHD_Analysis.c.o
> "_analysis3_", referenced from:
> _CCTKi_BindingsSchedule_MHD_Analysis in ScheduleMHD_Analysis.c.o
> "_analysis4_", referenced from:
> _CCTKi_BindingsSchedule_MHD_Analysis in ScheduleMHD_Analysis.c.o
> "_checkfortranparameters_", referenced from:
> _CCTKi_BindingsSchedule_Fortran in ScheduleFortran.c.o
> "_grmhd_initial_", referenced from:
> _CCTKi_BindingsSchedule_MHD_INIT in ScheduleMHD_INIT.c.o
> ld: symbol(s) not found for architecture arm64
> clang: error: linker command failed with exit code 1 (use -v to see invocation)
> make[2]: *** [/Users/garrison/Applications/Cactus/exe/cactus_specgrmhd] Error 1
> make[1]: *** [specgrmhd] Error 2
> make: *** [specgrmhd-rebuild] Error 2
> 
> -DG
> 
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> 
> --
> Erik Schnetter <schnetter at gmail.com<mailto:schnetter at gmail.com>>
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Yours,
Roland

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