[Users] Issue with compiling ET on cluster

Shamim Haque 1910511 shamims at iiserb.ac.in
Tue Nov 15 12:30:06 CST 2022


Hello Roland,

Thanks a lot for the suggestions. I'll try to figure it out.

Regards
Shamim
ᐧ

On Tue, Nov 15, 2022 at 11:31 PM Roland Haas <rhaas at illinois.edu> wrote:

> Hello Shamim,
>
> > Thanks for pointing out the issue. I'll check with HPC admins to fix the
> > Intel-17 or install a better version. Could you please help me with the
> > issue regarding running BNSM on more than 1 node? The issue is explained
> in
> > my previous email in reply to your suggestions on problems divided into
> > Part A,  B and C.
>
> That is unfortunately quite tricky to do. Each cluster handles this a
> bit differently. My best suggestion is to first look for an example of
> a hybrid job (MPI+OpenMP) that the cluster admins hopefully provide.
>
> Next you must construct a submitscript (template) that matches their
> example (more or less).
>
> You can try these out by submitting test jobs and looking at the file:
>
> <basedir>/<jobname>/output-0000/SIMFACTORY/SubmitScript
>
> which has all the replacements done.
>
> For testing you may want to set the "submit" option in the machine ini
> file to just "echo 42" or so so that no actual job is submitted.
>
> I will be, unfortunately, quite busy until after the ET release (this
> week) and most likely also next week, so cannot really promise to be
> able look into this very deeply.
>
> My best suggestion is to track down an OpenMP+MPI example in the
> cluster documentation and then tweak your SubmitScript (foo.sub) file
> until you have something that, when provided the correct options,
> matches their example.
>
> The error that you received basically says that your submitscript asked
> for more resources than available, but this can be triggered by a number
> of things including configuration options set by the admins.
>
> Yours,
> Roland
>
> --
> My email is as private as my paper mail. I therefore support encrypting
> and signing email messages. Get my PGP key from http://pgp.mit.edu .
>
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