[Users] compiling issues with libifport.so.5, libfabric.so.1

Tomas Andrade tandrade at icc.ub.edu
Mon Nov 21 23:04:15 CST 2022


Hi,

I’m installing the toolkit in this machine
https://www.nlhpc.cl/infraestructura/ . The documentation is in spanish but
the relevant specs are:

128 nodes HPE ProLiant SL230s Gen8
each node with two CPUs Intel Xeon E5-2660 v2
OS: CentOS 7

I am able to compile using the generic.cfg file, loading the following
modules

GCCcore/8.2.0
GCC/8.2.0-2.31.1
icc/2019.2.187-GCC-8.2.0-2.31.1-nlhpc
impi/2019.2.185
imkl/2019.2.187
Szip/2.1.1
HDF5/1.10.6
binutils/2.32
zlib/1.2.11
OpenMPI/3.1.3
hwloc/2.4.1

However, if I try to run a simulation I get errors:

- error while loading shared libraries: libifport.so.5: cannot open shared
object file: No such file or directory
- and similarly error while loading shared libraries: libfabric.so.1

After some googling, I managed to fix these errors by exporting the paths
of the files libifport.so.5, libfabric.so.1 but this seems a bit
strange and I am wondering if I can instead get the code to work by loading
the correct modules only.

Any thoughts?

Thank you!
Tomas

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