[Users] New parallel HDF5 API proposed

Werner Benger werner at cct.lsu.edu
Wed Sep 29 10:11:51 CDT 2010


I have not seen a concrete release date, I doubt it would already
be part of 1.10. As of now they're looking for feedback on the envisioned
API before starting to implement it, so very early state yet.

However, as far as I understand it, it will be based on parallel HDF5.
Cactus doesn't use parallel HDF5, but serial HDF5. It might have been
a decade ago since Thomas Radke tried parallel HDF5 with Cactus, so that
would want to be re-animated, requiring MPI-IO to be installed on the
respective machines as prerequisite. That apparently was an issue years
ago, maybe it's no longer one.

	Werner


On Wed, 29 Sep 2010 09:19:46 -0500, Erik Schnetter <schnetter at cct.lsu.edu>  
wrote:

> I think this is only a proposal at the moment. I think HDF 1.10 is
> currently under development -- maybe it'll make it in there, maybe
> it'll be 1.12. I'm not following HDF5 development, but Werner Benger
> does, maybe he knows.
>
> -erik
>
> On Wed, Sep 29, 2010 at 2:28 AM, Michael Koppitz <koppitz at aei.mpg.de>  
> wrote:
>>
>> This is intriguing indeed!
>> When will this new API be publicly available?
>>
>>
>> Michael
>>
>>
>> On Sep 29, 2010, at 3:24 AM, Erik Schnetter wrote:
>>
>>> The HDF5 groups is apparently contemplating adding a new high-level
>>> API for "HPC HDF5", based on parallel HDF5. I find the idea
>>> intriguing, as it would move much code that we have currently written
>>> in Carpet (and that we will have to write to address the "slow
>>> recovery" issue) into HDF5. In particular, recovering would consist
>>> essentially of a single call to H5HPCdataset_read_mult_all(), which
>>> would read multiple datasets from multiple processes.
>>>
>>> -erik
>>>
>>> --
>>> Erik Schnetter <schnetter at cct.lsu.edu>    
>>> http://www.cct.lsu.edu/~eschnett/
>>> <H5HPC_RFC-2010-09-28.pdf>_______________________________________________
>>> Users mailing list
>>> Users at einsteintoolkit.org
>>> http://lists.einsteintoolkit.org/mailman/listinfo/users
>>
>>
>> _______________________________________________
>> Users mailing list
>> Users at einsteintoolkit.org
>> http://lists.einsteintoolkit.org/mailman/listinfo/users
>>
>
>
>


-- 
___________________________________________________________________________
Dr. Werner Benger                Visualization Research
Laboratory for Creative Arts and Technology (LCAT)
Center for Computation & Technology at Louisiana State University (CCT/LSU)
211 Johnston Hall, Baton Rouge, Louisiana 70803
Tel.: +1 225 578 4809                        Fax.: +1 225 578-5362


More information about the Users mailing list