[Users] Cactus build on local HPC

[Geraint Pratten]

Hi,

I am running into some problems building Cactus/Einstein Toolkit on our
local HPC. The .ini file I am using looks okay to me. As far as I can tell,
there seems to be an issue with PAPI?

I've attached a copy of the error message. Does anyone have any insight
into this? If you need to see any particular files (e.g. .ini or .cfg
files) then just let me know which ones (including directory would be
helpful!) and I'll post back asap.

Thanks in advance! Your time taken is very much appreciated!

Regards
Geraint

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*Checking status of thorn CoordBase...Checking status of thorn
PUGHInterpChecking status of thorn
PUGHReduce/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:
In function
‘PAPI_Cactus_outinfo’:/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:51:0:
warning: ignoring #pragma omp master [-Wunknown-pragmas] #pragma omp
master ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:
In function
‘PAPI_Cactus_chkerr’:/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:62:0:
warning: ignoring #pragma omp critical [-Wunknown-pragmas] #pragma omp
critical
^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:
In function
‘PAPI_init’:/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:231:0:
warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp
parallel
private(ierr) ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:262:0:
warning: ignoring #pragma omp master [-Wunknown-pragmas] #pragma omp
master ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:267:7:
warning: implicit declaration of function ‘strdup’
[-Wimplicit-function-declaration]       char *const eventnames =
strdup(eventset_eventnames[n]);
 ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:267:32:
warning: initialization makes pointer from integer without a cast [enabled
by default]       char *const eventnames = strdup(eventset_eventnames[n]);

^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:270:7:
warning: implicit declaration of function ‘strtok_r’
[-Wimplicit-function-declaration]       for (char *event_name =
strtok_r(eventnames, sep, &lasts);
 ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:270:31:
warning: initialization makes pointer from integer without a cast [enabled
by default]       for (char *event_name = strtok_r(eventnames, sep,
&lasts);
 ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:270:7:
error: declaration of non-variable ‘strtok_r’ in ‘for’ loop initial
declaration       for (char *event_name = strtok_r(eventnames, sep,
&lasts);
 ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:272:23:
warning: assignment makes pointer from integer without a cast [enabled by
default]            event_name = strtok_r(NULL, sep, &lasts))

 ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:274:0:
warning: ignoring #pragma omp master [-Wunknown-pragmas] #pragma omp
master ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:301:0:
warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp
parallel
private(ierr) ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:
In function
‘output_stats’:/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:333:0:
warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp
parallel
private(ierr) ^/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/build/PAPI/stats.c:351:0:
warning: ignoring #pragma omp critical [-Wunknown-pragmas] #pragma omp
critical(PAPI_output_stats_add) ^make[3]: *** [stats.c.o] Error 1make[2]:
*** [make.checked] Error 2make[1]: ***
[/mnt/pact/gp234/NR/Cactus/configs/apollo-login.cm.cluster.ini/lib/libthorn_PAPI.a]
Error 2make[1]: *** Waiting for unfinished jobs....make: ***
[apollo-login.cm.cluster.ini] Error 2*

-- 
Geraint Pratten

Mobile: +44(0) 7581709282
E-mail: G.Pratten at sussex.ac.uk
Skype: geraint.pratten

Astronomy Centre
Pevensey 3 Building
University of Sussex
Falmer Campus
Brighton
BN1 9QH
United Kingdom
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