Commits September 2010

commits@lists.einsteintoolkit.org

7 participants
24 discussions

[svn:einsteintoolkit] www/global/ (Rev. 326)
by knarf＠cct.lsu.edu 30 Sep '10

30 Sep '10

User: knarf Date: 2010/09/30 04:19 PM Modified: /global/ footer.php Log: try to improve line break File Changes: Directory: /global/ =================== File [modified]: footer.php Delta lines: +1 -1 =================================================================== --- global/footer.php 2010-09-30 21:18:54 UTC (rev 325) +++ global/footer.php 2010-09-30 21:19:43 UTC (rev 326) @@ -1,7 +1,7 @@ </div> <div> -The Einstein Toolkit has been supported by NSF 0903973/0903782/0904015 (CIGR), 0701566/0855892 (XiRel), 0721915 (Alpaca), 0905046/0941653 (PetaCactus/PRAC). Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. +The Einstein Toolkit has been supported by NSF 0903973/0903782/0904015 (CIGR), 0701566/0855892 (XiRel), 0721915 (Alpaca), 0905046/0941653 (PetaCactus/PRAC). Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. einsteintoolkit.org 2010 | <a href="/credits">Credits</a> | Valid <a href="http://validator.w3.org/check?uri=referer">XHTML</a>/<a href="http://jigsaw.w3.org/css-validator/check?uri=referer&profile=css3">CSS</a> </div>

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[svn:einsteintoolkit] www/ (Rev. 325)
by knarf＠cct.lsu.edu 30 Sep '10

30 Sep '10

User: knarf Date: 2010/09/30 04:18 PM Modified: /about/ funding.php /global/ footer.php Log: add necessary sentence when citing NSF funding File Changes: Directory: /about/ ================== File [modified]: funding.php Delta lines: +1 -1 =================================================================== --- about/funding.php 2010-09-29 18:37:54 UTC (rev 324) +++ about/funding.php 2010-09-30 21:18:54 UTC (rev 325) @@ -6,7 +6,7 @@ <ul> -<li> NSF #0904015: <a href="">Collaborative Research: Community Infrastructure for General Relativity MHD (CIGR)</a> +<li> NSF #0904015: <a href="">Collaborative Research: Community Infrastructure for General Relativity MHD (CIGR)</a> Core development and support of the community software for general relativistic MHD</li> <li> NSF #1005165: <a href="">Interdisciplinary Research Experience in Computational Sciences</a> Directory: /global/ =================== File [modified]: footer.php Delta lines: +1 -1 =================================================================== --- global/footer.php 2010-09-29 18:37:54 UTC (rev 324) +++ global/footer.php 2010-09-30 21:18:54 UTC (rev 325) @@ -1,7 +1,7 @@ </div> <div> -The Einstein Toolkit has been supported by NSF 0903973/0903782/0904015 (CIGR), 0701566/0855892 (XiRel), 0721915 (Alpaca), 0905046/0941653 (PetaCactus/PRAC). +The Einstein Toolkit has been supported by NSF 0903973/0903782/0904015 (CIGR), 0701566/0855892 (XiRel), 0721915 (Alpaca), 0905046/0941653 (PetaCactus/PRAC). Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. einsteintoolkit.org 2010 | <a href="/credits">Credits</a> | Valid <a href="http://validator.w3.org/check?uri=referer">XHTML</a>/<a href="http://jigsaw.w3.org/css-validator/check?uri=referer&profile=css3">CSS</a> </div>

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[svn:einsteintoolkit] GRHydro/trunk/ (Rev. 158)
by bcmsma＠astro.rit.edu 29 Sep '10

29 Sep '10

User: bmundim Date: 2010/09/29 04:47 PM Added: /trunk/src/ GRHydro_BoundariesM.F90, GRHydro_CalcUpdateM.F90, GRHydro_Con2PrimM_pt.c, GRHydro_EigenproblemM.F90, GRHydro_FluxM.F90, GRHydro_HLLEM.F90, GRHydro_HLLEPolyM.F90, GRHydro_InterfacesM.h, GRHydro_PPMM.F90, GRHydro_ParamCheckM.F90, GRHydro_Prim2ConM.F90, GRHydro_ReconstructM.F90, GRHydro_ReconstructPolyM.F90, GRHydro_RegisterGZM.cc, GRHydro_RegisterVarsM.cc, GRHydro_RiemannSolveM.F90, GRHydro_SourceM.F90, GRHydro_TmunuM.F90, GRHydro_UpdateMaskM.F90, GRHydro_UtilsM.F90 Modified: /trunk/ interface.ccl, param.ccl, schedule.ccl /trunk/src/ GRHydro_Con2PrimM.F90, GRHydro_Macros.h, GRHydro_ParamCheck.F90, GRHydro_Prim2Con.F90, make.code.defn Log: Current RIT GRMHD code contributions: Add the magnetized counterparts for several GRHydro routines. Adjust interface.ccl, param.ccl and schedule.ccl appropriately. File Changes: Directory: /trunk/src/ ====================== File [added]: GRHydro_BoundariesM.F90 Delta lines: <Unavailable> File [added]: GRHydro_CalcUpdateM.F90 Delta lines: <Unavailable> File [modified]: GRHydro_Con2PrimM.F90 Delta lines: <Unavailable> File [added]: GRHydro_Con2PrimM_pt.c Delta lines: <Unavailable> File [added]: GRHydro_EigenproblemM.F90 Delta lines: <Unavailable> File [added]: GRHydro_FluxM.F90 Delta lines: <Unavailable> File [added]: GRHydro_HLLEM.F90 Delta lines: <Unavailable> File [added]: GRHydro_HLLEPolyM.F90 Delta lines: <Unavailable> File [added]: GRHydro_InterfacesM.h Delta lines: <Unavailable> File [modified]: GRHydro_Macros.h Delta lines: <Unavailable> File [added]: GRHydro_PPMM.F90 Delta lines: <Unavailable> File [modified]: GRHydro_ParamCheck.F90 Delta lines: <Unavailable> File [added]: GRHydro_ParamCheckM.F90 Delta lines: <Unavailable> File [modified]: GRHydro_Prim2Con.F90 Delta lines: <Unavailable> File [added]: GRHydro_Prim2ConM.F90 Delta lines: <Unavailable> File [added]: GRHydro_ReconstructM.F90 Delta lines: <Unavailable> File [added]: GRHydro_ReconstructPolyM.F90 Delta lines: <Unavailable> File [added]: GRHydro_RegisterGZM.cc Delta lines: <Unavailable> File [added]: GRHydro_RegisterVarsM.cc Delta lines: <Unavailable> File [added]: GRHydro_RiemannSolveM.F90 Delta lines: <Unavailable> File [added]: GRHydro_SourceM.F90 Delta lines: <Unavailable> File [added]: GRHydro_TmunuM.F90 Delta lines: <Unavailable> File [added]: GRHydro_UpdateMaskM.F90 Delta lines: <Unavailable> File [added]: GRHydro_UtilsM.F90 Delta lines: <Unavailable> File [modified]: make.code.defn Delta lines: <Unavailable> Directory: /trunk/ ================== File [modified]: interface.ccl Delta lines: <Unavailable> File [modified]: param.ccl Delta lines: <Unavailable> File [modified]: schedule.ccl Delta lines: <Unavailable>

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[svn:einsteintoolkit] www/about/members/ (Rev. 324)
by gallen＠cct.lsu.edu 29 Sep '10

29 Sep '10

User: gallen Date: 2010/09/29 01:37 PM Modified: /about/members/ index.php Log: Jennifer Seiler File Changes: Directory: /about/members/ ========================== File [modified]: index.php Delta lines: +1 -0 =================================================================== --- about/members/index.php 2010-09-17 01:24:07 UTC (rev 323) +++ about/members/index.php 2010-09-29 18:37:54 UTC (rev 324) @@ -79,6 +79,7 @@ <li>NASA Goddard Space Flight Center</li> <ul> <li>Bernard Kelly</li> + <li>Jennifer Seiler</li> </ul>

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 40)
by schnetter＠cct.lsu.edu 23 Sep '10

23 Sep '10

User: eschnett Date: 2010/09/23 08:34 PM Modified: /trunk/ einsteintoolkit.th Log: Add CactusTest arrangement Add CactusWave example arrangement Update some ExternalLibrary thorns Add empty example describing how to add local thorns File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.th Delta lines: +43 -1 =================================================================== --- trunk/einsteintoolkit.th 2010-09-17 22:49:21 UTC (rev 39) +++ trunk/einsteintoolkit.th 2010-09-24 01:34:49 UTC (rev 40) @@ -96,17 +96,50 @@ CactusPUGH/PUGHInterp CactusPUGH/PUGHReduce CactusPUGH/PUGHSlab + CactusPUGHIO/IOHDF5Util CactusPUGHIO/IOHDF5 +#CactusTest/TestAllTypes +CactusTest/TestArrays +CactusTest/TestComplex +CactusTest/TestCoordinates +CactusTest/TestFortranDependencies1 +CactusTest/TestFortranDependencies2 +CactusTest/TestFpointerNULL +CactusTest/TestFreeF90 +CactusTest/TestGlobalReduce +CactusTest/TestInclude1 +CactusTest/TestInclude2 +CactusTest/TestLocalReduce +CactusTest/TestLoop +CactusTest/TestReduce +CactusTest/TestSchedule +CactusTest/TestStrings +CactusTest/TestTable +CactusTest/TestTimers +CactusTest/TestTypes + CactusUtils/Formaline CactusUtils/NaNChecker CactusUtils/Nice CactusUtils/TerminationTrigger CactusUtils/TimerReport +CactusWave/IDScalarWave +CactusWave/IDScalarWaveC +CactusWave/IDScalarWaveCXX +CactusWave/IDScalarWaveElliptic +CactusWave/WaveBinarySource +CactusWave/WaveToyC +CactusWave/WaveToyCXX +CactusWave/WaveToyExtra +CactusWave/WaveToyF77 +CactusWave/WaveToyF90 +CactusWave/WaveToyFreeF90 + # The Einstein Toolkit !TARGET = $ARR !TYPE = svn @@ -168,6 +201,7 @@ EinsteinUtils/TGRtensor + # Additional Cactus thorns !TARGET = $ARR !TYPE = svn @@ -178,8 +212,9 @@ ExternalLibraries/GSL ExternalLibraries/HDF5 ExternalLibraries/LAPACK +ExternalLibraries/libjpeg ExternalLibraries/LORENE -ExternalLibraries/libjpeg +ExternalLibraries/OpenSSL TAT/TATelliptic @@ -258,3 +293,10 @@ Carpet/CarpetSlab Carpet/CarpetTracker Carpet/LoopControl + + + +# Private thorns +!TARGET = $ARR +!TYPE = ignore +!CHECKOUT =

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[svn:einsteintoolkit] EOS_Hybrid/trunk/src/ (Rev. 7)
by schnetter＠cct.lsu.edu 23 Sep '10

23 Sep '10

User: eschnett Date: 2010/09/23 06:30 PM Modified: /trunk/src/ EOS_Hybrid_Startup.F Log: Change comment syntax to avoid spurious syntax errors on some AIX systems File Changes: Directory: /trunk/src/ ====================== File [modified]: EOS_Hybrid_Startup.F Delta lines: +12 -12 =================================================================== --- trunk/src/EOS_Hybrid_Startup.F 2010-07-12 14:50:23 UTC (rev 6) +++ trunk/src/EOS_Hybrid_Startup.F 2010-09-23 23:30:30 UTC (rev 7) @@ -61,20 +61,20 @@ end if -c$$$ all these are now set by the polytropic EOS +cccc all these are now set by the polytropic EOS -c$$$ These constants match the values in RNSID: consts.h +cccc These constants match the values in RNSID: consts.h -c$$$ m_solar_cgs = 1.987d33 -c$$$ c_cgs = 2.9979d10 -c$$$ G_cgs = 6.6732d-8 -c$$$ -c$$$ m_solar_geom = G_cgs / c_cgs**2 * m_solar_cgs -c$$$ p_geom_factor = G_cgs / c_cgs**4 * m_solar_geom**2 -c$$$ rho_geom_factor = p_geom_factor * c_cgs**2 -c$$$ rho_geom_factor_inv = 1.d0 / rho_geom_factor -c$$$ -c$$$ eos_k_cgs = eos_k * rho_geom_factor**gamma_ini / p_geom_factor +cccc m_solar_cgs = 1.987d33 +cccc c_cgs = 2.9979d10 +cccc G_cgs = 6.6732d-8 +cccc +cccc m_solar_geom = G_cgs / c_cgs**2 * m_solar_cgs +cccc p_geom_factor = G_cgs / c_cgs**4 * m_solar_geom**2 +cccc rho_geom_factor = p_geom_factor * c_cgs**2 +cccc rho_geom_factor_inv = 1.d0 / rho_geom_factor +cccc +cccc eos_k_cgs = eos_k * rho_geom_factor**gamma_ini / p_geom_factor eos_k_supernuclear_cgs = eos_k_cgs * (rho_nuc * rho_geom_factor_inv)** . (eos_gamma - eos_gamma_supernuclear)

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[svn:einsteintoolkit] Hydro_Analysis/trunk/src/ (Rev. 112)
by knarf＠cct.lsu.edu 22 Sep '10

22 Sep '10

User: knarf Date: 2010/09/22 09:14 AM Modified: /trunk/src/ Hydro_Analysis.c Log: complain when multiple maxima have been found File Changes: Directory: /trunk/src/ ====================== File [modified]: Hydro_Analysis.c Delta lines: +9 -4 =================================================================== --- trunk/src/Hydro_Analysis.c 2010-08-18 18:54:33 UTC (rev 111) +++ trunk/src/Hydro_Analysis.c 2010-09-22 14:14:00 UTC (rev 112) @@ -127,10 +127,15 @@ if (CCTK_ReduceLocArrayToArray1D(cctkGH, -1, handle_sum, &local_rho_max_loc, level_rho_max_loc, 4, CCTK_VARIABLE_REAL)) CCTK_WARN(0, "Error while reducing local_rho_max_loc"); - if (level_rho_max_loc[3]) { - Hydro_Analysis_rho_max_loc[0] = level_rho_max_loc[0]; - Hydro_Analysis_rho_max_loc[1] = level_rho_max_loc[1]; - Hydro_Analysis_rho_max_loc[2] = level_rho_max_loc[2]; + if (fabs(level_rho_max_loc[3]) < 1.e-14) { + if (fabs(level_rho_max_loc[3]-1.) < 1.e-14) + { + Hydro_Analysis_rho_max_loc[0] = level_rho_max_loc[0]; + Hydro_Analysis_rho_max_loc[1] = level_rho_max_loc[1]; + Hydro_Analysis_rho_max_loc[2] = level_rho_max_loc[2]; + } else + CCTK_WARN(1, "Found more than one identical maximum, not setting anything."); + } /* CCTK_VInfo(CCTK_THORNSTRING, "New location: %g,%g,%g", Hydro_Analysis_rho_max_loc[0],

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[svn:einsteintoolkit] GRHydro/trunk/src/ (Rev. 157)
by knarf＠cct.lsu.edu 22 Sep '10

22 Sep '10

User: knarf Date: 2010/09/22 08:49 AM Modified: /trunk/src/ GRHydro_UpdateMask.F90 Log: add EOS Omni support File Changes: Directory: /trunk/src/ ====================== File [modified]: GRHydro_UpdateMask.F90 Delta lines: +47 -3 =================================================================== --- trunk/src/GRHydro_UpdateMask.F90 2010-09-15 18:50:13 UTC (rev 156) +++ trunk/src/GRHydro_UpdateMask.F90 2010-09-22 13:49:10 UTC (rev 157) @@ -253,10 +253,27 @@ CCTK_INT :: type_bits, atmosphere, not_atmosphere CCTK_INT :: eos_handle +#if !USE_EOS_OMNI +#ifdef _EOS_BASE_INC_ +#undef _EOS_BASE_INC_ +#endif +#include "EOS_Base.inc" +#endif + +#if USE_EOS_OMNI +! begin EOS Omni vars + integer :: n = 1 + integer :: keytemp = 0 + integer :: anyerr = 0 + integer :: keyerr(1) = 0 + real*8 :: xpress = 0.0d0 + real*8 :: xeps = 0.0d0 + real*8 :: xtemp = 0.0d0 + real*8 :: xye = 0.0d0 +! end EOS Omni vars +#endif + eos_handle = GRHydro_polytrope_handle - if (use_eosgeneral == 0) then - eos_handle = -1 - endif call SpaceMask_GetTypeBits(type_bits, "Hydro_Atmosphere") call SpaceMask_GetStateBits(atmosphere, "Hydro_Atmosphere",& @@ -273,6 +290,15 @@ velx(i,j,k) = 0.0d0 vely(i,j,k) = 0.0d0 velz(i,j,k) = 0.0d0 +#if USE_EOS_OMNI + call EOS_Omni_press(eos_handle,keytemp,GRHydro_eos_rf_prec,n,& + rho(i,j,k),eps(i,j,k),xtemp,xye,press(i,j,k),keyerr,anyerr) + call EOS_Omni_EpsFromPress(eos_handle,keytemp,GRHydro_eos_rf_prec,n,& + rho(i,j,k),xeps,xtemp,xye,press(i,j,k),eps(i,j,k),keyerr,anyerr) +#else + press(i,j,k) = EOS_Pressure(eos_handle, GRHydro_rho_min, eps(i,j,k)) + eps(i,j,k) = EOS_SpecificIntEnergy(eos_handle, GRHydro_rho_min, press(i,j,k)) +#endif det = SPATIAL_DETERMINANT(gxx(i,j,k), gxy(i,j,k), gxz(i,j,k), \ gyy(i,j,k), gyz(i,j,k), gzz(i,j,k)) call prim2conpolytype(eos_handle, & @@ -288,6 +314,15 @@ velx_p(i,j,k) = 0.0d0 vely_p(i,j,k) = 0.0d0 velz_p(i,j,k) = 0.0d0 +#if USE_EOS_OMNI + call EOS_Omni_press(eos_handle,keytemp,GRHydro_eos_rf_prec,n,& + rho_p(i,j,k),eps_p(i,j,k),xtemp,xye,press_p(i,j,k),keyerr,anyerr) + call EOS_Omni_EpsFromPress(eos_handle,keytemp,GRHydro_eos_rf_prec,n,& + rho_p(i,j,k),xeps,xtemp,xye,press_p(i,j,k),eps_p(i,j,k),keyerr,anyerr) +#else + press_p(i,j,k) = EOS_Pressure(eos_handle, GRHydro_rho_min, eps_p(i,j,k)) + eps_p(i,j,k) = EOS_SpecificIntEnergy(eos_handle, GRHydro_rho_min, press_p(i,j,k)) +#endif det = SPATIAL_DETERMINANT(gxx_p(i,j,k), gxy_p(i,j,k), gxz_p(i,j,k), \ gyy_p(i,j,k), gyz_p(i,j,k), gzz_p(i,j,k)) call prim2conpolytype(eos_handle, & @@ -304,6 +339,15 @@ velx_p_p(i,j,k) = 0.0d0 vely_p_p(i,j,k) = 0.0d0 velz_p_p(i,j,k) = 0.0d0 +#if USE_EOS_OMNI + call EOS_Omni_press(eos_handle,keytemp,GRHydro_eos_rf_prec,n,& + rho_p_p(i,j,k),eps_p_p(i,j,k),xtemp,xye,press_p_p(i,j,k),keyerr,anyerr) + call EOS_Omni_EpsFromPress(eos_handle,keytemp,GRHydro_eos_rf_prec,n,& + rho_p_p(i,j,k),xeps,xtemp,xye,press_p_p(i,j,k),eps_p_p(i,j,k),keyerr,anyerr) +#else + press_p_p(i,j,k) = EOS_Pressure(eos_handle, GRHydro_rho_min, eps_p_p(i,j,k)) + eps_p_p(i,j,k) = EOS_SpecificIntEnergy(eos_handle, GRHydro_rho_min, press_p_p(i,j,k)) +#endif det = SPATIAL_DETERMINANT(gxx_p_p(i,j,k), gxy_p_p(i,j,k), gxz_p_p(i,j,k), \ gyy_p_p(i,j,k), gyz_p_p(i,j,k), gzz_p_p(i,j,k)) call prim2conpolytype(eos_handle, &

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 39)
by schnetter＠cct.lsu.edu 17 Sep '10

17 Sep '10

User: eschnett Date: 2010/09/17 05:49 PM Modified: /trunk/ einsteintoolkit.th Log: Remove GetComponents, since checking it out from the new location doesn't work File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.th Delta lines: +0 -7 =================================================================== --- trunk/einsteintoolkit.th 2010-09-17 22:03:56 UTC (rev 38) +++ trunk/einsteintoolkit.th 2010-09-17 22:49:21 UTC (rev 39) @@ -258,10 +258,3 @@ Carpet/CarpetSlab Carpet/CarpetTracker Carpet/LoopControl - -# GetComponents, to keep updating -!TARGET = $ROOT -!TYPE = git -!URL = git://github.com/gridaphobe/GetComponents.git -!AUTH_URL = git@github.com:gridaphobe/GetComponents.git -!CHECKOUT = GetComponents \ No newline at end of file

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 38)
by eric9＠mac.com 17 Sep '10

17 Sep '10

User: eric9 Date: 2010/09/17 05:03 PM Modified: /trunk/ einsteintoolkit.th Log: update to include new location of GetComponents File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.th Delta lines: +11 -4 =================================================================== --- trunk/einsteintoolkit.th 2010-09-08 20:51:39 UTC (rev 37) +++ trunk/einsteintoolkit.th 2010-09-17 22:03:56 UTC (rev 38) @@ -111,7 +111,7 @@ !TARGET = $ARR !TYPE = svn !URL = https://svn.einsteintoolkit.org/cactus/$1/$2/trunk -!CHECKOUT = +!CHECKOUT = EinsteinAnalysis/ADMAnalysis EinsteinAnalysis/ADMConstraints EinsteinAnalysis/AHFinder @@ -190,7 +190,7 @@ !TYPE = svn !URL = http://svn.aei.mpg.de/numrel/$1/$2/trunk !AUTH_URL = https://svn.aei.mpg.de/numrel/$1/$2/trunk -!CHECKOUT = +!CHECKOUT = AEIThorns/AEILocalInterp @@ -198,7 +198,7 @@ !TARGET = $ARR !TYPE = svn !URL = https://svn.cct.lsu.edu/repos/numrel/$1/$2/trunk -!CHECKOUT = +!CHECKOUT = LSUThorns/QuasiLocalMeasures LSUThorns/SummationByParts @@ -210,7 +210,7 @@ !URL = git://github.com/ianhinder/Kranc.git !AUTH_URL = git@github.com:ianhinder/Kranc.git !REPO_PATH= Auxiliary/Cactus -!CHECKOUT = +!CHECKOUT = KrancNumericalTools/GenericFD @@ -258,3 +258,10 @@ Carpet/CarpetSlab Carpet/CarpetTracker Carpet/LoopControl + +# GetComponents, to keep updating +!TARGET = $ROOT +!TYPE = git +!URL = git://github.com/gridaphobe/GetComponents.git +!AUTH_URL = git@github.com:gridaphobe/GetComponents.git +!CHECKOUT = GetComponents \ No newline at end of file

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Commits September 2010