Commits August 2018

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commit/WVUThorns: 38 new changesets
by Bitbucket 30 Aug '18

30 Aug '18

38 new commits in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/84b6dc8ddfdb/ Changeset: 84b6dc8ddfdb Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE/GiRaFFEfood: Add code tests, with tolerances set based on GCC vs ICC compiler results Affected #: 32 files https://bitbucket.org/zach_etienne/wvuthorns/commits/85e4f251eaef/ Changeset: 85e4f251eaef Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE: Revise tolerances based on third machine/compiler -- only GiRaFFE_tests_FastWave affected. Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/7ace6f28022b/ Changeset: 7ace6f28022b Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE: Update GiRaFFE tests, this time using boundary conditions consistent with what might be used in production. Affected #: 32 files https://bitbucket.org/zach_etienne/wvuthorns/commits/6afe3e82cc5e/ Changeset: 6afe3e82cc5e Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE: Adjust floor value on tolerance tests to 1e-12. Should fix Jenkins failure. Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/68acfd9875cd/ Changeset: 68acfd9875cd Branch: None User: rhaas80 Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE: remove explicit BLAS and LAPACK from tests instead let them be auto-activated. Not requesting a specific thorn lets this work eg with OpenBLAS which provides the LAPACK and BLAS capability but is not called BLAS or LAPACK. Affected #: 18 files https://bitbucket.org/zach_etienne/wvuthorns/commits/8c087b4bdf07/ Changeset: 8c087b4bdf07 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE: impose_speed_limit_output_u0(): Declare a CCTK_REAL as const and remove comments from earlier version of the code. Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/0c36e880a996/ Changeset: 0c36e880a996 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE: Update documentation, at reviewer Roland Haas' request. GiRaFFE/IllinoisGRMHD: Remove SCRIPT and LANG from configuration.ccl Affected #: 3 files https://bitbucket.org/zach_etienne/wvuthorns/commits/a7b67870fa15/ Changeset: a7b67870fa15 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Add warning that current symmetry thorns in ETK do not support staggered gridfunctions Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/57e2a17ea079/ Changeset: 57e2a17ea079 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Document that the "st" in mhd_st_i = \tilde{S}_i stands for "\tilde{S}" Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/cb2e2b8d06c8/ Changeset: cb2e2b8d06c8 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: remove commented-out, wrong prolongation operators Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/b0848b2465f2/ Changeset: b0848b2465f2 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Remove backslashes from interface.ccl comment blocks, so as not to confuse the parser. Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/62b0edd3a6d1/ Changeset: 62b0edd3a6d1 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Make sure all gridfunction groups are properly commented, both in GiRaFFE and IllinoisGRMHD. Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/d420c76fb902/ Changeset: d420c76fb902 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Remove GiRaFFE_MaxNumEvolvedVars and IllinoisGRMHD_MaxNumEvolvedVars from GiRaFFE and IllinoisGRMHD, respectively. MoL now figures this out on its own. Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/00231eba9fe1/ Changeset: 00231eba9fe1 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Remove "equatorial" symmetry option from GiRaFFE and IllinoisGRMHD until it has been fully tested. Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/b5056987f6da/ Changeset: b5056987f6da Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Add nice gridfunction staggering table to documentation Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/8e978122ca40/ Changeset: 8e978122ca40 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Move all Aligned Rotator test parameters from the GiRaFFE evolution thorn to GiRaFFEfood, and add a new parameter "min_radius_inside_of_which_conserv_to_prims_FFE_and_FFE_evolution_is_DISABLED" that does exactly what its name suggests. Update the Aligned rotator test result. Affected #: 8 files https://bitbucket.org/zach_etienne/wvuthorns/commits/dca0d3d19fd6/ Changeset: dca0d3d19fd6 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Give rule of thumb for setting damp_lorenz; remove extraneous comments Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/192c73ae347d/ Changeset: 192c73ae347d Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Clean up test suite parameter files and output Affected #: 31 files https://bitbucket.org/zach_etienne/wvuthorns/commits/05b47a4bd0e1/ Changeset: 05b47a4bd0e1 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE/IllinoisGRMHD: Update damp_lorenz comment in param.ccl to be more useful. Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/d07e3e771a28/ Changeset: d07e3e771a28 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Update schedule.ccl according to reviewer's comments. Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/841272212d39/ Changeset: 841272212d39 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE tests: Update Exact Wald result after scheduling fix Affected #: 3 files https://bitbucket.org/zach_etienne/wvuthorns/commits/8106aee01098/ Changeset: 8106aee01098 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE tests: Fix AMR grid structures: In SplitMonopole, ExactWald, MagnetoWald, and AlignedRotator tests, AMR grids did not have an integer number of gridpoints or did not properly avoid the coordinate singularity. Affected #: 13 files https://bitbucket.org/zach_etienne/wvuthorns/commits/5b65ef3fe9a9/ Changeset: 5b65ef3fe9a9 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE tests: Remove "NPROCS 2" from every test in test.ccl, so that it can be run with arbitrary number of mpi tasks Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/c172280a0184/ Changeset: c172280a0184 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE tests: Three Alfven Wave test suffered from a blowup in roundoff error due to x=0 being replaced by +/- machine epsilon at t=0. Stagger about x=0 and results are consistent across machines. Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/74a46ed02283/ Changeset: 74a46ed02283 Branch: None User: zach_etienne Date: 2018-08-31 01:58:03+00:00 Summary: GiRaFFE review: Prefix 'const' to *all* variables that are constant in GiRaFFE. All tests pass after fix. Also remove unused variables. Affected #: 18 files https://bitbucket.org/zach_etienne/wvuthorns/commits/6d8db0161ea3/ Changeset: 6d8db0161ea3 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE review: Address remaining comments in GiRaFFE thorn. GiRaFFEfood is next. Affected #: 7 files https://bitbucket.org/zach_etienne/wvuthorns/commits/83122d90c712/ Changeset: 83122d90c712 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE Review: Address comments on GiRaFFEfood. Affected #: 4 files https://bitbucket.org/zach_etienne/wvuthorns/commits/5e25ed04e144/ Changeset: 5e25ed04e144 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFEfood: Address all compiler warnings. Affected #: 12 files https://bitbucket.org/zach_etienne/wvuthorns/commits/8d3e845d9bb8/ Changeset: 8d3e845d9bb8 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: ID_converter_GiRaFFE: Fix compilation warnings. Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/9dd7c720a20c/ Changeset: 9dd7c720a20c Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE documentation: Add the references.bib file Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/46c809919628/ Changeset: 46c809919628 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: WVUThorns/ShiftedKerrSchild: Fix compiler warning. Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/9d6ed1763805/ Changeset: 9d6ed1763805 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE Review: Address remaining comments. Affected #: 3 files https://bitbucket.org/zach_etienne/wvuthorns/commits/fe8864aae82e/ Changeset: fe8864aae82e Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE Review: ID_converter_GiRaFFE/schedule.ccl: Remove [3] suffix from gridfunction group names in SYNC call. ID_converter_ILGRMHD/schedule.ccl had the same problem. Dunno why the parser didn't barf. Both fixed. Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/19f5fda14cf9/ Changeset: 19f5fda14cf9 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE Review: Use srand() instead of srandom() to seed rand(). Also add comment in param.ccl explaining the use of the random_seed. Affects ID_converter_GiRaFFE *and* ID_converter_ILGRMHD. Affected #: 4 files https://bitbucket.org/zach_etienne/wvuthorns/commits/39302e852f47/ Changeset: 39302e852f47 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE review: Accidentally removed random_pert variable from the ID_converter_GiRaFFE/param.ccl file. Re-add. Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/2a3c2ff082c0/ Changeset: 2a3c2ff082c0 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE review: Modifications/improvements to ShiftedKerrSchild. Affected #: 2 files https://bitbucket.org/zach_etienne/wvuthorns/commits/c1aebf565d84/ Changeset: c1aebf565d84 Branch: None User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE review: Properly prefix functions in GiRaFFEfood with GiRaFFE_ Affected #: 1 file https://bitbucket.org/zach_etienne/wvuthorns/commits/7436f0127f56/ Changeset: 7436f0127f56 Branch: rhaas/GiRAFFE-review User: zach_etienne Date: 2018-08-31 01:58:04+00:00 Summary: GiRaFFE review: Actually the prefix for functions inside GiRaFFEfood should be GiRaFFEfood, not GiRaFFE. Also fix some tabination issues. Affected #: 5 files Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. 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commit/EinsteinInitialData: 3 new changesets
by Bitbucket 30 Aug '18

30 Aug '18

3 new commits in EinsteinInitialData: https://bitbucket.org/einsteintoolkit/einsteininitialdata/commits/2e4986a45… Changeset: 2e4986a4553f Branch: None User: rhaas80 Date: 2018-08-30 18:56:43+00:00 Summary: Hydro_RNSID: define _GNU_SOURCE in utils for getopt Affected #: 1 file https://bitbucket.org/einsteintoolkit/einsteininitialdata/commits/d1bef7139… Changeset: d1bef7139f31 Branch: None User: rhaas80 Date: 2018-08-30 19:01:08+00:00 Summary: Hydro_RNSID: remove nested comments comment only change Affected #: 1 file https://bitbucket.org/einsteintoolkit/einsteininitialdata/commits/3f18340d8… Changeset: 3f18340d8cc6 Branch: master User: rhaas80 Date: 2018-08-30 19:02:29+00:00 Summary: Hydro_RNSID: avoid compiler warnings Affected #: 1 file Repository URL: https://bitbucket.org/einsteintoolkit/einsteininitialdata/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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commit/WVUThorns: zach_etienne: GiRaFFE review: Actually the prefix for functions inside GiRaFFEfood should be GiRaFFEfood, not GiRaFFE. Also fix some tabination issues.
by Bitbucket 30 Aug '18

30 Aug '18

1 new commit in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/51f8b2de62ae/ Changeset: 51f8b2de62ae Branch: master User: zach_etienne Date: 2018-08-30 17:26:19+00:00 Summary: GiRaFFE review: Actually the prefix for functions inside GiRaFFEfood should be GiRaFFEfood, not GiRaFFE. Also fix some tabination issues. Affected #: 5 files Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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commit/WVUThorns: zach_etienne: GiRaFFE review: Properly prefix functions in GiRaFFEfood with GiRaFFE_
by Bitbucket 30 Aug '18

30 Aug '18

1 new commit in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/2b1b3fb5280f/ Changeset: 2b1b3fb5280f Branch: master User: zach_etienne Date: 2018-08-30 17:23:33+00:00 Summary: GiRaFFE review: Properly prefix functions in GiRaFFEfood with GiRaFFE_ Affected #: 1 file Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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commit/WVUThorns: zach_etienne: GiRaFFE review: Modifications/improvements to ShiftedKerrSchild.
by Bitbucket 29 Aug '18

29 Aug '18

1 new commit in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/8156ef95d366/ Changeset: 8156ef95d366 Branch: master User: zach_etienne Date: 2018-08-29 23:55:51+00:00 Summary: GiRaFFE review: Modifications/improvements to ShiftedKerrSchild. Affected #: 2 files Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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commit/WVUThorns: zach_etienne: GiRaFFE review: Accidentally removed random_pert variable from the ID_converter_GiRaFFE/param.ccl file. Re-add.
by Bitbucket 29 Aug '18

29 Aug '18

1 new commit in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/94c6e97016a9/ Changeset: 94c6e97016a9 Branch: master User: zach_etienne Date: 2018-08-29 16:25:29+00:00 Summary: GiRaFFE review: Accidentally removed random_pert variable from the ID_converter_GiRaFFE/param.ccl file. Re-add. Affected #: 1 file Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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commit/WVUThorns: zach_etienne: GiRaFFE Review: Use srand() instead of srandom() to seed rand(). Also add comment in param.ccl explaining the use of the random_seed. Affects ID_converter_GiRaFFE *and* ID_converter_ILGRMHD.
by Bitbucket 29 Aug '18

29 Aug '18

1 new commit in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/8907b7551a54/ Changeset: 8907b7551a54 Branch: master User: zach_etienne Date: 2018-08-29 13:46:06+00:00 Summary: GiRaFFE Review: Use srand() instead of srandom() to seed rand(). Also add comment in param.ccl explaining the use of the random_seed. Affects ID_converter_GiRaFFE *and* ID_converter_ILGRMHD. Affected #: 4 files Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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commit/WVUThorns: zach_etienne: GiRaFFE Review: ID_converter_GiRaFFE/schedule.ccl: Remove [3] suffix from gridfunction group names in SYNC call. ID_converter_ILGRMHD/schedule.ccl had the same problem. Dunno why the parser didn't barf. Both fixed.
by Bitbucket 29 Aug '18

29 Aug '18

1 new commit in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/0fc42870fcb3/ Changeset: 0fc42870fcb3 Branch: master User: zach_etienne Date: 2018-08-29 13:23:27+00:00 Summary: GiRaFFE Review: ID_converter_GiRaFFE/schedule.ccl: Remove [3] suffix from gridfunction group names in SYNC call. ID_converter_ILGRMHD/schedule.ccl had the same problem. Dunno why the parser didn't barf. Both fixed. Affected #: 2 files Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

1 0

commit/WVUThorns: zach_etienne: WVUThorns/IllinoisGRMHD: Fix all GCC (v 7.3.0) compiler warnings.
by Bitbucket 29 Aug '18

29 Aug '18

1 new commit in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/3568467d61ec/ Changeset: 3568467d61ec Branch: master User: zach_etienne Date: 2018-08-29 12:37:54+00:00 Summary: WVUThorns/IllinoisGRMHD: Fix all GCC (v 7.3.0) compiler warnings. Affected #: 9 files Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

1 0

commit/WVUThorns: zach_etienne: GiRaFFE Review: Address remaining comments.
by Bitbucket 29 Aug '18

29 Aug '18

1 new commit in WVUThorns: https://bitbucket.org/zach_etienne/wvuthorns/commits/ee86e8c0c9e6/ Changeset: ee86e8c0c9e6 Branch: master User: zach_etienne Date: 2018-08-29 12:27:17+00:00 Summary: GiRaFFE Review: Address remaining comments. Affected #: 3 files Repository URL: https://bitbucket.org/zach_etienne/wvuthorns/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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Commits August 2018