Commits April 2012

commits@lists.einsteintoolkit.org

10 participants
167 discussions

[svn:einsteintoolkit] incoming/PITTNullCode/ (Rev. 60)
by reisswig＠tapir.caltech.edu 05 Apr '12

05 Apr '12

User: reisswig Date: 2012/04/05 04:03 PM Added: /PITTNullCode/ /PITTNullCode/SphericalHarmonicReconASCII/ configuration.ccl, interface.ccl, param.ccl, schedule.ccl /PITTNullCode/SphericalHarmonicReconASCII/src/ get.cc, make.code.defn, read.cc, sph_database.cc, sph_database.hh, startup.cc, vars.hh Log: Boundary data reader that can handle Llama and SpEC data files. File Changes: Directory: /PITTNullCode/SphericalHarmonicReconASCII/ ===================================================== File [added]: configuration.ccl Delta lines: <Unavailable> File [added]: interface.ccl Delta lines: <Unavailable> File [added]: param.ccl Delta lines: <Unavailable> File [added]: schedule.ccl Delta lines: <Unavailable> Directory: /PITTNullCode/SphericalHarmonicReconASCII/src/ ========================================================= File [added]: get.cc Delta lines: <Unavailable> File [added]: make.code.defn Delta lines: <Unavailable> File [added]: read.cc Delta lines: <Unavailable> File [added]: sph_database.cc Delta lines: <Unavailable> File [added]: sph_database.hh Delta lines: <Unavailable> File [added]: startup.cc Delta lines: <Unavailable> File [added]: vars.hh Delta lines: <Unavailable>

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[svn:einsteintoolkit] Workshop_Spring_2012/handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/ (Rev. 84)
by roland.haas＠physics.gatech.edu 05 Apr '12

05 Apr '12

User: rhaas Date: 2012/04/05 03:14 PM Removed: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v0/src/ coretracker.c, make.code.defn, movingblob.c /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v0/test/ test_blob_moving.par /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v0/test/test_blob_moving/ coretracker::core_location..asc, coretracker::moving_blob_location..asc, hydrobase::rho.d.asc, hydrobase::rho.x.asc, hydrobase::rho.y.asc, hydrobase::rho.z.asc, rho.maximum.asc, rho.minimum.asc, rho.norm1.asc, rho.norm2.asc /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v1/src/ coretracker.c, make.code.defn, movingblob.c /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v1/test/ test_blob_moving.par /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v1/test/test_blob_moving/ coretracker::core_location..asc, coretracker::moving_blob_location..asc, hydrobase::rho.d.asc, hydrobase::rho.x.asc, hydrobase::rho.y.asc, hydrobase::rho.z.asc, rho.maximum.asc, rho.minimum.asc, rho.norm1.asc, rho.norm2.asc /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v2/src/ movingblob.c /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v3/src/ movingblob.c /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/src/ movingblob.c /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/test/ test_blob_moving.par /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/test/test_blob_moving/ coretracker::core_location..asc, coretracker::moving_blob_location..asc, hydrobase::rho.d.asc, hydrobase::rho.x.asc, hydrobase::rho.y.asc, hydrobase::rho.z.asc, rho.maximum.asc, rho.minimum.asc, rho.norm1.asc, rho.norm2.asc /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/src/ movingblob.c /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/test/ test_blob_moving.par /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/test/test_blob_moving/ coretracker::core_location..asc, coretracker::moving_blob_location..asc, hydrobase::rho.d.asc, hydrobase::rho.x.asc, hydrobase::rho.y.asc, hydrobase::rho.z.asc, rho.maximum.asc, rho.minimum.asc, rho.norm1.asc, rho.norm2.asc Log: remove superfluous files form CoreTracker stages File Changes: Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v0/src/ ==================================================================================================== File [removed]: coretracker.c Delta lines: <Unavailable> File [removed]: make.code.defn Delta lines: <Unavailable> File [removed]: movingblob.c Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v1/src/ ==================================================================================================== File [removed]: coretracker.c Delta lines: <Unavailable> File [removed]: make.code.defn Delta lines: <Unavailable> File [removed]: movingblob.c Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v2/src/ ==================================================================================================== File [removed]: movingblob.c Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v3/src/ ==================================================================================================== File [removed]: movingblob.c Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/src/ ==================================================================================================== File [removed]: movingblob.c Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/src/ ==================================================================================================== File [removed]: movingblob.c Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v0/test/ ===================================================================================================== File [removed]: test_blob_moving.par Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v1/test/ ===================================================================================================== File [removed]: test_blob_moving.par Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/test/ ===================================================================================================== File [removed]: test_blob_moving.par Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/test/ ===================================================================================================== File [removed]: test_blob_moving.par Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v0/test/test_blob_moving/ ====================================================================================================================== File [removed]: coretracker::core_location..asc Delta lines: <Unavailable> File [removed]: coretracker::moving_blob_location..asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.d.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.x.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.y.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.z.asc Delta lines: <Unavailable> File [removed]: rho.maximum.asc Delta lines: <Unavailable> File [removed]: rho.minimum.asc Delta lines: <Unavailable> File [removed]: rho.norm1.asc Delta lines: <Unavailable> File [removed]: rho.norm2.asc Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v1/test/test_blob_moving/ ====================================================================================================================== File [removed]: coretracker::core_location..asc Delta lines: <Unavailable> File [removed]: coretracker::moving_blob_location..asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.d.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.x.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.y.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.z.asc Delta lines: <Unavailable> File [removed]: rho.maximum.asc Delta lines: <Unavailable> File [removed]: rho.minimum.asc Delta lines: <Unavailable> File [removed]: rho.norm1.asc Delta lines: <Unavailable> File [removed]: rho.norm2.asc Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/test/test_blob_moving/ ====================================================================================================================== File [removed]: coretracker::core_location..asc Delta lines: <Unavailable> File [removed]: coretracker::moving_blob_location..asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.d.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.x.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.y.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.z.asc Delta lines: <Unavailable> File [removed]: rho.maximum.asc Delta lines: <Unavailable> File [removed]: rho.minimum.asc Delta lines: <Unavailable> File [removed]: rho.norm1.asc Delta lines: <Unavailable> File [removed]: rho.norm2.asc Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/test/test_blob_moving/ ====================================================================================================================== File [removed]: coretracker::core_location..asc Delta lines: <Unavailable> File [removed]: coretracker::moving_blob_location..asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.d.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.x.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.y.asc Delta lines: <Unavailable> File [removed]: hydrobase::rho.z.asc Delta lines: <Unavailable> File [removed]: rho.maximum.asc Delta lines: <Unavailable> File [removed]: rho.minimum.asc Delta lines: <Unavailable> File [removed]: rho.norm1.asc Delta lines: <Unavailable> File [removed]: rho.norm2.asc Delta lines: <Unavailable>

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[svn:einsteintoolkit] Workshop_Spring_2012/handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v8/test/ (Rev. 83)
by roland.haas＠physics.gatech.edu 05 Apr '12

05 Apr '12

User: rhaas Date: 2012/04/05 03:12 PM Added: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v8/test/ test_blob_moving.par /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v8/test/test_blob_moving/ coretracker::core_location..asc, coretracker::moving_blob_location..asc, hydrobase::rho.d.asc, hydrobase::rho.x.asc, hydrobase::rho.y.asc, hydrobase::rho.z.asc, rho.maximum.asc, rho.minimum.asc, rho.norm1.asc, rho.norm2.asc Log: hopefully last update of CoreTracker stages File Changes: Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v8/test/ ===================================================================================================== File [added]: test_blob_moving.par Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v8/test/test_blob_moving/ ====================================================================================================================== File [added]: coretracker::core_location..asc Delta lines: <Unavailable> File [added]: coretracker::moving_blob_location..asc Delta lines: <Unavailable> File [added]: hydrobase::rho.d.asc Delta lines: <Unavailable> File [added]: hydrobase::rho.x.asc Delta lines: <Unavailable> File [added]: hydrobase::rho.y.asc Delta lines: <Unavailable> File [added]: hydrobase::rho.z.asc Delta lines: <Unavailable> File [added]: rho.maximum.asc Delta lines: <Unavailable> File [added]: rho.minimum.asc Delta lines: <Unavailable> File [added]: rho.norm1.asc Delta lines: <Unavailable> File [added]: rho.norm2.asc Delta lines: <Unavailable>

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[svn:einsteintoolkit] Workshop_Spring_2012/handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ (Rev. 82)
by roland.haas＠physics.gatech.edu 05 Apr '12

05 Apr '12

User: rhaas Date: 2012/04/05 02:45 PM Modified: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ test_blob_moving.par /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/ coretracker::core_location..asc, coretracker::moving_blob_location..asc, hydrobase::rho.d.asc, hydrobase::rho.x.asc, hydrobase::rho.y.asc, hydrobase::rho.z.asc, rho.maximum.asc, rho.minimum.asc, rho.norm1.asc, rho.norm2.asc Log: (hopefully) final fix for CoreTracker test suite File Changes: Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ =============================================================================== File [modified]: test_blob_moving.par Delta lines: +3 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving.par 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving.par 2012-04-05 19:45:58 UTC (rev 82) @@ -63,9 +63,11 @@ Carpet::prolongation_order_space = 3 Carpet::prolongation_order_time = 2 -CoreTracker::initial_core_x = 8. +CoreTracker::initial_core_x = 6. CoreTracker::add_moving_blobs = yes CoreTracker::initial_phi = 0. +CoreTracker::core_radius = 4. +CoreTracker::threshold_density = 5e-4 IO::out_dir = $parfile IOASCII::one_file_per_group = yes Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/ ================================================================================================ File [modified]: coretracker::core_location..asc Delta lines: +7 -7 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/coretracker::core_location..asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/coretracker::core_location..asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # 0D ASCII output created by CarpetIOASCII -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # CORETRACKER::CORE_LOCATION (coretracker::core_location) @@ -8,35 +8,35 @@ # refinement level 0 multigrid level 0 map 0 component 0 time level 0 # column format: 1:it 2:tl 3:rl 4:c 5:ml 6:ix 7:iy 8:iz 9:time 10:x 11:y 12:z 13:data # data columns: 13:core_x 14:core_y 15:core_z -0 0 0 0 0 0 0 0 0 0 0 0 5.80858806277359e-06 -2.83226712361305e-09 -2.83226712483713e-09 +0 0 0 0 0 0 0 0 0 0 0 0 5.97414179677484 0.00037119918827376 0.00037119918827376 # iteration 1 # refinement level 0 multigrid level 0 map 0 component 0 time level 0 # column format: 1:it 2:tl 3:rl 4:c 5:ml 6:ix 7:iy 8:iz 9:time 10:x 11:y 12:z 13:data # data columns: 13:core_x 14:core_y 15:core_z -1 0 0 0 0 0 0 0 0.468765625 0 0 0 8.12186425929453e-06 9.02633015641678e-06 -2.85598145355554e-09 +1 0 0 0 0 0 0 0 0.468765625 0 0 0 5.97998462712855 0.423550001709877 0.000368883058555311 # iteration 2 # refinement level 0 multigrid level 0 map 0 component 0 time level 0 # column format: 1:it 2:tl 3:rl 4:c 5:ml 6:ix 7:iy 8:iz 9:time 10:x 11:y 12:z 13:data # data columns: 13:core_x 14:core_y 15:core_z -2 0 0 0 0 0 0 0 0.93753125 0 0 0 4.68935644741378e-06 -1.6658604641314e-07 -2.86282190643049e-09 +2 0 0 0 0 0 0 0 0.93753125 0 0 0 5.95010288646372 0.849435147379942 0.000375027228659667 # iteration 3 # refinement level 0 multigrid level 0 map 0 component 0 time level 0 # column format: 1:it 2:tl 3:rl 4:c 5:ml 6:ix 7:iy 8:iz 9:time 10:x 11:y 12:z 13:data # data columns: 13:core_x 14:core_y 15:core_z -3 0 0 0 0 0 0 0 1.406296875 0 0 0 3.15890385186167e-06 3.3100723073834e-07 -2.89540978952342e-09 +3 0 0 0 0 0 0 0 1.406296875 0 0 0 5.87355704076553 1.24662911437687 0.000374383921704898 # iteration 4 # refinement level 0 multigrid level 0 map 0 component 0 time level 0 # column format: 1:it 2:tl 3:rl 4:c 5:ml 6:ix 7:iy 8:iz 9:time 10:x 11:y 12:z 13:data # data columns: 13:core_x 14:core_y 15:core_z -4 0 0 0 0 0 0 0 1.8750625 0 0 0 1.50642420461926e-06 -1.07366892853767e-06 -2.94852256691903e-09 +4 0 0 0 0 0 0 0 1.8750625 0 0 0 5.79800755487958 1.67281514392179 0.0003780869507263 # iteration 5 # refinement level 0 multigrid level 0 map 0 component 0 time level 0 # column format: 1:it 2:tl 3:rl 4:c 5:ml 6:ix 7:iy 8:iz 9:time 10:x 11:y 12:z 13:data # data columns: 13:core_x 14:core_y 15:core_z -5 0 0 0 0 0 0 0 2.343828125 0 0 0 -1.48155986790459e-06 -1.71125669773851e-06 -2.99889192839152e-09 +5 0 0 0 0 0 0 0 2.343828125 0 0 0 5.64849927869896 2.06221964478335 0.000374703047316125 File [modified]: coretracker::moving_blob_location..asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/coretracker::moving_blob_location..asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/coretracker::moving_blob_location..asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # 0D ASCII output created by CarpetIOASCII -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # CORETRACKER::MOVING_BLOB_LOCATION (coretracker::moving_blob_location) File [modified]: hydrobase::rho.d.asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/hydrobase::rho.d.asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/hydrobase::rho.d.asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # 1D ASCII output created by CarpetIOASCII -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # HYDROBASE::RHO d (hydrobase::rho) File [modified]: hydrobase::rho.x.asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/hydrobase::rho.x.asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/hydrobase::rho.x.asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # 1D ASCII output created by CarpetIOASCII -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # HYDROBASE::RHO x (hydrobase::rho) File [modified]: hydrobase::rho.y.asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/hydrobase::rho.y.asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/hydrobase::rho.y.asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # 1D ASCII output created by CarpetIOASCII -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # HYDROBASE::RHO y (hydrobase::rho) File [modified]: hydrobase::rho.z.asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/hydrobase::rho.z.asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/hydrobase::rho.z.asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # 1D ASCII output created by CarpetIOASCII -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # HYDROBASE::RHO z (hydrobase::rho) File [modified]: rho.maximum.asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/rho.maximum.asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/rho.maximum.asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # Scalar ASCII output created by CarpetIOScalar -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # HYDROBASE::rho (rho) File [modified]: rho.minimum.asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/rho.minimum.asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/rho.minimum.asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # Scalar ASCII output created by CarpetIOScalar -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # HYDROBASE::rho (rho) File [modified]: rho.norm1.asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/rho.norm1.asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/rho.norm1.asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # Scalar ASCII output created by CarpetIOScalar -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # HYDROBASE::rho (rho) File [modified]: rho.norm2.asc Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/rho.norm2.asc 2012-04-05 19:28:01 UTC (rev 81) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/rho.norm2.asc 2012-04-05 19:45:58 UTC (rev 82) @@ -1,5 +1,5 @@ # Scalar ASCII output created by CarpetIOScalar -# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:27:10-0500 +# created on etk-os.etk.org by etk-user on Apr 05 2012 at 14:45:08-0500 # parameter filename: "test_blob_moving.par" # # HYDROBASE::rho (rho)

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[svn:einsteintoolkit] Workshop_Spring_2012/handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ (Rev. 81)
by roland.haas＠physics.gatech.edu 05 Apr '12

05 Apr '12

User: rhaas Date: 2012/04/05 02:28 PM Modified: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ test_blob_moving.par /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/ coretracker::core_location..asc, coretracker::moving_blob_location..asc, hydrobase::rho.d.asc, hydrobase::rho.x.asc, hydrobase::rho.y.asc, hydrobase::rho.z.asc, rho.maximum.asc, rho.minimum.asc, rho.norm1.asc, rho.norm2.asc Log: more CoreTracker test suite updates (need MoL to be active) File Changes: Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ =============================================================================== File [modified]: test_blob_moving.par Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/ ================================================================================================ File [modified]: coretracker::core_location..asc Delta lines: <Unavailable> File [modified]: coretracker::moving_blob_location..asc Delta lines: <Unavailable> File [modified]: hydrobase::rho.d.asc Delta lines: <Unavailable> File [modified]: hydrobase::rho.x.asc Delta lines: <Unavailable> File [modified]: hydrobase::rho.y.asc Delta lines: <Unavailable> File [modified]: hydrobase::rho.z.asc Delta lines: <Unavailable> File [modified]: rho.maximum.asc Delta lines: <Unavailable> File [modified]: rho.minimum.asc Delta lines: <Unavailable> File [modified]: rho.norm1.asc Delta lines: <Unavailable> File [modified]: rho.norm2.asc Delta lines: <Unavailable>

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[McLachlan]McLachlan branch, cakernel, updated. 92ee624ed62c1cee4a7357d762d54785afddfd88
by Carpet git repositories 05 Apr '12

05 Apr '12

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "McLachlan". The branch, cakernel has been updated via 92ee624ed62c1cee4a7357d762d54785afddfd88 (commit) via 6d1fa6e088f0985fc114cc4929b11ed48f115ab6 (commit) from 5b5b744ad8ec5b7627c84c236f0f3ae4f01b8d07 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- commit 92ee624ed62c1cee4a7357d762d54785afddfd88 Author: Ian Hinder <ian.hinder(a)aei.mpg.de> Date: Thu Apr 5 21:20:05 2012 +0200 Regenerate code (tile and stencil size) Kranc version 6bed8e74aac5bd1e76f2e7a4d8efcf166a60c6e6 commit 6d1fa6e088f0985fc114cc4929b11ed48f115ab6 Author: Ian Hinder <ian.hinder(a)aei.mpg.de> Date: Thu Apr 5 21:18:43 2012 +0200 Change tile size to 20,20,40 ----------------------------------------------------------------------- Summary of changes: ML_BSSN/cakernel.ccl | 506 +++++++++++++++++++++++++------------------------- m/McLachlan_BSSN.m | 2 +- 2 files changed, 254 insertions(+), 254 deletions(-) hooks/post-receive -- McLachlan

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[svn:einsteintoolkit] Workshop_Spring_2012/handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ (Rev. 80)
by roland.haas＠physics.gatech.edu 05 Apr '12

05 Apr '12

User: rhaas Date: 2012/04/05 02:17 PM Modified: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ test_blob_moving.par /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/ coretracker::core_location..asc, coretracker::moving_blob_location..asc, hydrobase::rho.d.asc, hydrobase::rho.x.asc, hydrobase::rho.y.asc, hydrobase::rho.z.asc, rho.maximum.asc, rho.minimum.asc, rho.norm1.asc, rho.norm2.asc Log: update test to work with release version File Changes: Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/ =============================================================================== File [modified]: test_blob_moving.par Delta lines: <Unavailable> Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker/test/test_blob_moving/ ================================================================================================ File [modified]: coretracker::core_location..asc Delta lines: <Unavailable> File [modified]: coretracker::moving_blob_location..asc Delta lines: <Unavailable> File [modified]: hydrobase::rho.d.asc Delta lines: <Unavailable> File [modified]: hydrobase::rho.x.asc Delta lines: <Unavailable> File [modified]: hydrobase::rho.y.asc Delta lines: <Unavailable> File [modified]: hydrobase::rho.z.asc Delta lines: <Unavailable> File [modified]: rho.maximum.asc Delta lines: <Unavailable> File [modified]: rho.minimum.asc Delta lines: <Unavailable> File [modified]: rho.norm1.asc Delta lines: <Unavailable> File [modified]: rho.norm2.asc Delta lines: <Unavailable>

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[svn:einsteintoolkit] Workshop_Spring_2012/handson_analysis/ (Rev. 79)
by roland.haas＠physics.gatech.edu 05 Apr '12

05 Apr '12

User: rhaas Date: 2012/04/05 01:53 PM Modified: /handson_analysis/ handson_analysis.pdf, handson_analysis.tex Log: describe CoreTracker versions avaiable File Changes: Directory: /handson_analysis/ ============================= File [modified]: handson_analysis.pdf Delta lines: +0 -0 =================================================================== (Binary files differ) File [modified]: handson_analysis.tex Delta lines: +38 -2 =================================================================== --- handson_analysis/handson_analysis.tex 2012-04-05 18:46:42 UTC (rev 78) +++ handson_analysis/handson_analysis.tex 2012-04-05 18:53:03 UTC (rev 79) @@ -56,7 +56,7 @@ \begin{block}{What to compute} \begin{align*} M &= \int \Heaviside(\rho - \rho_{\text{min}}) - \Heaviside(R_{\text{max}} - |x^i - x^i_{\teut{old}}|) + \Heaviside(R_{\text{max}} - |x^i - x^i_{\text{old}}|) \rho\,d^3x \\ X^i&= \left( \int \Heaviside(\rho - \rho_{\text{min}}) @@ -103,7 +103,7 @@ \end{alltt} \item<2-> \texttt{MoL\_PseudoEvolution} evaluate integrand on current time-slice \begin{alltt}\color{blue} -if(distance2 < SQR(core\_radius) +if(distance2 < SQR(core\_radius) \&\& rho[idx] >= threshold\_density) \{ core\_density\_x[idx] = x[idx] * rho[idx]; core\_density[idx] = rho[idx]; @@ -155,4 +155,40 @@ \item controlled by a parameter \texttt{add\_moving\_blobs}. Check \texttt{param.ccl} for possible options and \texttt{src/moving\_blobs.c} for the code. \end{itemize} \end{frame} + +\begin{frame}[fragile] + \frametitle{Sample implementation} + We provide a sample implementation in the workshop repostiory. The simplest way to download it is using GetComponents + \begin{center} + \begin{alltt} +cd \$HOME +./GetComponents -a https://svn.einsteintoolkit.org/\textbackslash + documents/Workshop\_Spring\_2012/\textbackslash + handson\_analysis/Cactus/misc/\textbackslash + CoreTracker.th + \end{alltt} + \end{center} + This will provide you with the final version of the code in + \texttt{arrangements/Introduction/CoreTracker} which you may + add to your thorn list in \texttt{Cactus/configs/sim/ThornList}. + There are also ``halfway'' versions of the code in \texttt{arrangements/Introduction/CoreTracker\_stages}. +\end{frame} + +\begin{frame}[fragile] + \frametitle{Sample implementation stages} +\begin{tabular}{cc} +Version & adds \\ +\hline\hline +\texttt{v0} & just after \texttt{make newthorn} \\ +\texttt{v1} & adds \texttt{param.ccl}\\ +\texttt{v2} & adds skeleton source file \texttt{src/coretracker.c}\\ +\texttt{v3} & adds \texttt{interface.ccl}\\ +\texttt{v4} & adds \texttt{schedule.ccl} \\ +\texttt{v5} & adds initialization and evolution routines\\ +\texttt{v6} & adds reduction routine\\ +\texttt{v7} & adds routine to provide known data\\ +\texttt{v8} & adds test case +\end{tabular} +\end{frame} + \end{document}

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[svn:einsteintoolkit] Workshop_Spring_2012/handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/ (Rev. 78)
by roland.haas＠physics.gatech.edu 05 Apr '12

05 Apr '12

User: rhaas Date: 2012/04/05 01:46 PM Removed: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v9/ Modified: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v4/ schedule.ccl /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/ schedule.ccl /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/src/ coretracker.c /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/ interface.ccl, param.ccl, schedule.ccl /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/src/ make.code.defn Log: remove duplicate stage in CoreTracker File Changes: Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v4/ ================================================================================================ File [modified]: schedule.ccl Delta lines: +0 -7 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v4/schedule.ccl 2012-04-05 18:16:46 UTC (rev 77) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v4/schedule.ccl 2012-04-05 18:46:42 UTC (rev 78) @@ -6,27 +6,20 @@ { LANG: C OPTIONS: global - WRITES: CoreTracker::core_location } "Import initial location from parameters" schedule CoreTracker_SetGridFunction AT POSTINITIAL { LANG: C - READS: HydroBase::rho Grid::coordinates CoreTracker::core_location - WRITES: CoreTracker::density_weighted_core_location } "Set initial grid functions" schedule CoreTracker_SetGridFunction in MoL_PseudoEvolution { LANG: C - READS: HydroBase::rho Grid::coordinates CoreTracker::core_location - WRITES: CoreTracker::density_weighted_core_location } "Compute rho*x^i" schedule CoreTracker_Reduce at ANALYSIS { LANG: C OPTIONS: global - READS: CoreTracker::density_weighted_core_location - WRITES: core_location } "compute center of mass of core region" Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/ ================================================================================================ File [modified]: schedule.ccl Delta lines: +0 -7 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/schedule.ccl 2012-04-05 18:16:46 UTC (rev 77) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v5/schedule.ccl 2012-04-05 18:46:42 UTC (rev 78) @@ -6,27 +6,20 @@ { LANG: C OPTIONS: global - WRITES: CoreTracker::core_location } "Import initial location from parameters" schedule CoreTracker_SetGridFunction AT POSTINITIAL { LANG: C - READS: HydroBase::rho Grid::coordinates CoreTracker::core_location - WRITES: CoreTracker::density_weighted_core_location } "Set initial grid functions" schedule CoreTracker_SetGridFunction in MoL_PseudoEvolution { LANG: C - READS: HydroBase::rho Grid::coordinates CoreTracker::core_location - WRITES: CoreTracker::density_weighted_core_location } "Compute rho*x^i" schedule CoreTracker_Reduce at ANALYSIS { LANG: C OPTIONS: global - READS: CoreTracker::density_weighted_core_location - WRITES: core_location } "compute center of mass of core region" Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/ ================================================================================================ File [modified]: interface.ccl Delta lines: +6 -0 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/interface.ccl 2012-04-05 18:16:46 UTC (rev 77) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/interface.ccl 2012-04-05 18:46:42 UTC (rev 78) @@ -11,3 +11,9 @@ { core_density_x, core_density_y, core_density_z, core_density } "rho*x^i in core region" + +# only used for debugging +CCTK_REAL moving_blob_location type=scalar +{ + blob_x, blob_y, blob_z +} "location of target blob" File [modified]: param.ccl Delta lines: +40 -0 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/param.ccl 2012-04-05 18:16:46 UTC (rev 77) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/param.ccl 2012-04-05 18:46:42 UTC (rev 78) @@ -29,3 +29,43 @@ { 0:* :: "any positive value" } 1e10 + +# parameters used only for the made up moving blobs +CCTK_BOOLEAN add_moving_blobs "put fake data onto the grid to test the code" +{ +} "no" + +CCTK_REAL maximum_separation "how far apart are the blobs at maximum distance" +{ + 0:* :: "any positive number" +} 8. + +CCTK_REAL minimum_separation "how far apart are the blobs at minimum distance" +{ + 0:* :: "any positive number" +} 6. + +CCTK_REAL radial_period "period of radial motion" +{ + *:* :: "sign determines direction of motion" +} 100. + +CCTK_REAL angular_period "period of motion in phi angle" +{ + *:* :: "positive if counterclockwise, negative is clockwise motion" +} 42. + +CCTK_REAL initial_phi "initial phi location of blobs" +{ + *:* :: "any angle, in radians" +} 0. + +CCTK_REAL A "amplitude of blob" +{ + 0:* :: "any positive value" +} 1e-3 + +CCTK_REAL sigma "sigma parameter of Gaussian blob" +{ + (0:* :: "any positive value" +} 1.5 File [modified]: schedule.ccl Delta lines: +16 -0 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/schedule.ccl 2012-04-05 18:16:46 UTC (rev 77) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/schedule.ccl 2012-04-05 18:46:42 UTC (rev 78) @@ -23,3 +23,19 @@ LANG: C OPTIONS: global } "compute center of mass of core region" + +# only used for debugging +if (add_moving_blobs) { +STORAGE: moving_blob_location +schedule CoreTracker_AddBlob IN HydroBase_Initial after HydroBase_Zero +{ + LANG: C + OPTIONS: local +} "add moving blobs to grid" + +schedule CoreTracker_AddBlob in MoL_PseudoEvolution BEFORE CoreTracker_SetGridFunction +{ + LANG: C + OPTIONS: local +} "add moving blobs to grid" +} Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/src/ ==================================================================================================== File [modified]: coretracker.c Delta lines: +41 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/src/coretracker.c 2012-04-05 18:16:46 UTC (rev 77) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v6/src/coretracker.c 2012-04-05 18:46:42 UTC (rev 78) @@ -90,5 +90,45 @@ DECLARE_CCTK_PARAMETERS; DECLARE_CCTK_ARGUMENTS; - /* do something here */ + CCTK_REAL rho_sum = -1; // \sum \rho over the grid, used to normalise center of mass coordinates + struct { // keeps track of which variables to sum over + const char *variable; + CCTK_REAL *target; + } reductions[] = { + {"CoreTracker::core_density", &rho_sum}, + {"CoreTracker::core_density_x", core_x}, + {"CoreTracker::core_density_y", core_y}, + {"CoreTracker::core_density_z", core_z} + }; + + CCTK_INT handle_sum = CCTK_ReductionHandle("sum"); + if(handle_sum < 0) + CCTK_VWarn(CCTK_WARN_ABORT, __LINE__, __FILE__, CCTK_THORNSTRING, + "Unable to get reduction handle 'sum': %d", handle_sum); + + /* compute \sum \rho and \sum \rho x^i over core region */ + for(unsigned int red = 0 ; red < DIM(reductions) ; ++red) { + const int varindex = CCTK_VarIndex(reductions[red].variable); + if(varindex < 0) + CCTK_VWarn(CCTK_WARN_ABORT, __LINE__, __FILE__, CCTK_THORNSTRING, + "Error while reducing %s, could not obtain variable index: %d", + reductions[red].variable, varindex); + const int ierr = CCTK_Reduce(cctkGH, -1, handle_sum, 1, CCTK_VARIABLE_REAL, + reductions[red].target, 1, + varindex); + if(ierr != 0) + CCTK_VWarn(CCTK_WARN_ABORT, __LINE__, __FILE__, CCTK_THORNSTRING, + "Error while reducing %s: %d", reductions[red].variable, ierr); + } + + if(rho_sum != 0.) { + /* normalise center of mass coordinates */ + *core_x /= rho_sum; + *core_y /= rho_sum; + *core_z /= rho_sum; + } else { + CCTK_VWarn(CCTK_WARN_ALERT, __LINE__, __FILE__, CCTK_THORNSTRING, + "Did not find any mass in core region, using old core location (%g,%g,%g).", + *core_x, *core_y, *core_z); + } } Directory: /handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/src/ ==================================================================================================== File [modified]: make.code.defn Delta lines: +1 -1 =================================================================== --- handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/src/make.code.defn 2012-04-05 18:16:46 UTC (rev 77) +++ handson_analysis/Cactus/arrangements/Introduction/CoreTracker_stages/CoreTracker_v7/src/make.code.defn 2012-04-05 18:46:42 UTC (rev 78) @@ -1,7 +1,7 @@ # Main make.code.defn file for thorn CoreTracker # Source files in this directory -SRCS = coretracker.c +SRCS = coretracker.c movingblob.c # Subdirectories containing source files SUBDIRS =

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[svn:einsteintoolkit] Workshop_Spring_2012/handson_analysis/ (Rev. 77)
by roland.haas＠physics.gatech.edu 05 Apr '12

05 Apr '12

User: rhaas Date: 2012/04/05 01:16 PM Modified: /handson_analysis/ handson_analysis.tex Log: fix some typos in CoreTracker handson File Changes: Directory: /handson_analysis/ ============================= File [modified]: handson_analysis.tex Delta lines: +2 -2 =================================================================== --- handson_analysis/handson_analysis.tex 2012-04-05 18:13:26 UTC (rev 76) +++ handson_analysis/handson_analysis.tex 2012-04-05 18:16:46 UTC (rev 77) @@ -56,7 +56,7 @@ \begin{block}{What to compute} \begin{align*} M &= \int \Heaviside(\rho - \rho_{\text{min}}) - \Heaviside(|x^i - x^i_{\text{old}}| - R_{\text{max}}) + \Heaviside(R_{\text{max}} - |x^i - x^i_{\teut{old}}|) \rho\,d^3x \\ X^i&= \left( \int \Heaviside(\rho - \rho_{\text{min}}) @@ -146,7 +146,7 @@ \item for this the example implementation contains an extra routine that provides a made up binary where the position of the neutron stars are given by a Gaussian blob \begin{align} \rho(r) &= A \exp(-r^2/(2\sigma^2)) \\ - R(t) &= R_{\text{max}} + (R_{\text{max}} - R_{\text{min}})\,\cos(2\pi/T_r) \\ + R(t) &= R_{\text{outer}} + (R_{\text{inner}} - R_{\text{outer}})\,\cos(2\pi/T_r) \\ \phi(t) &= 2\pi t/T_\phi + \phi_0 \\ x(t) &= \pm R(t) \cos \phi(t) \text{ for right/left blob} \\ y(t) &= \pm R(t) \sin \phi(t) \\

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