Commits August 2012

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[svn:einsteintoolkit] TmunuBase/trunk/ (Rev. 17)
by bcmsma＠astro.rit.edu 09 Aug '12

09 Aug '12

User: bmundim Date: 2012/08/09 05:07 PM Modified: /trunk/ schedule.ccl Log: Schedule TmunuBase_SetStressEnergyState AT Wragh BEFORE MoL_Register *This allows other thorns to conditionally register Tmunu with MoL based on the fact that stress_energy_state scalar is set or not. File Changes: Directory: /trunk/ ================== File [modified]: schedule.ccl Delta lines: +2 -1 =================================================================== --- trunk/schedule.ccl 2012-07-24 16:55:15 UTC (rev 16) +++ trunk/schedule.ccl 2012-08-09 22:07:47 UTC (rev 17) @@ -7,7 +7,8 @@ # Initialise stuff -SCHEDULE TmunuBase_SetStressEnergyState AT basegrid +#SCHEDULE TmunuBase_SetStressEnergyState AT basegrid +SCHEDULE TmunuBase_SetStressEnergyState AT Wragh BEFORE MoL_Register { LANG: Fortran OPTIONS: global

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New changesets in Carpet Mercurial
by Carpet mercurial repositories 09 Aug '12

09 Aug '12

changeset: 3617:3ad741b06f53 user: Roland Haas <roland.haas(a)physics.gatech.edu> date: Sat May 05 15:12:59 2012 -0700 summary: CarpetIOHDF5: add option checkpoint_every_divisor changeset: 3618:ccc5a41c06f2 user: Roland Haas <roland.haas(a)physics.gatech.edu> date: Tue May 29 10:19:53 2012 -0700 summary: CarpetLib: add self-copy logic to classes with pointer members changeset: 3619:6b449d88260b tag: tip user: Roland Haas <roland.haas(a)physics.gatech.edu> date: Sat Jun 02 09:42:23 2012 -0700 summary: Carpet: make parameters steerable

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[svn:einsteintoolkit] EOS_Omni/trunk/ (Rev. 65)
by rhaas＠tapir.caltech.edu 09 Aug '12

09 Aug '12

User: rhaas Date: 2012/08/09 04:52 PM Modified: /trunk/ configuration.ccl, param.ccl /trunk/src/nuc_eos/ readtable.c /trunk/test/ eos_omni.par Log: add option read_table_on_single_process to have a named processor read the full table and MPI_Bcast it to the other processors From: Roland Haas <roland.haas(a)physics.gatech.edu> File Changes: Directory: /trunk/src/nuc_eos/ ============================== File [modified]: readtable.c Delta lines: +54 -41 =================================================================== --- trunk/src/nuc_eos/readtable.c 2012-08-01 20:35:47 UTC (rev 64) +++ trunk/src/nuc_eos/readtable.c 2012-08-09 21:52:00 UTC (rev 65) @@ -8,20 +8,28 @@ #include "cctk_Arguments.h" #include "cctk_Functions.h" +// mini NoMPI +#ifdef HAVE_CAPABILITY_MPI +#include <mpi.h> +#define BCAST(buffer, size) MPI_Bcast(buffer, size, MPI_BYTE, my_reader_process, MPI_COMM_WORLD) +#else +#define BCAST(buffer, size) do { /* do nothing */ } while(0) +#endif + // Interface of function for fortran module eostable void CCTK_FNAME(setup_eosmodule) (CCTK_INT* , CCTK_INT* , CCTK_INT*, CCTK_REAL*, CCTK_REAL*, CCTK_REAL*, CCTK_REAL*, CCTK_REAL*); -// Catch HDF5 errors +// call HDF5 if we are an IO processor, handle errors from HDF5 #define HDF5_ERROR(fn_call) \ - do { \ + if (doIO) { \ int _error_code = fn_call; \ if (_error_code < 0) \ CCTK_VWarn (CCTK_WARN_ABORT, __LINE__, __FILE__, CCTK_THORNSTRING, \ "HDF5 call '%s' returned error code %d", \ #fn_call, _error_code); \ - } while (0) + } static int file_is_readable(const char* filename); static int file_is_readable(const char* filename) @@ -48,9 +56,17 @@ CCTK_Info(CCTK_THORNSTRING,nuceos_table_name); CCTK_Info(CCTK_THORNSTRING,"*******************************"); + CCTK_INT my_reader_process = reader_process; + if (my_reader_process < 0 || my_reader_process >= CCTK_nProcs(cctkGH)) + { + CCTK_VWarn(CCTK_WARN_COMPLAIN, __LINE__, __FILE__, CCTK_THORNSTRING, + "Requested IO process %d out of range. Reverting to process 0.", my_reader_process); + my_reader_process = 0; + } + const int doIO = !read_table_on_single_process || CCTK_MyProc(cctkGH) == my_reader_process; - hid_t file; - if (!file_is_readable(nuceos_table_name)) + hid_t file = -1; + if (doIO && !file_is_readable(nuceos_table_name)) CCTK_VWarn(CCTK_WARN_ABORT, __LINE__, __FILE__, CCTK_THORNSTRING, "Could not read nuceos_table_name'%s'", nuceos_table_name); @@ -58,27 +74,27 @@ // Use these two defines to easily read in a lot of variables in the same way // The first reads in one variable of a given type completely -#define READ_EOS_HDF5(NAME,VAR,TYPE,MEM) \ +#define READ_BCAST_EOS_HDF5(NAME,VAR,TYPE,NELEMS) \ do { \ hid_t dataset; \ HDF5_ERROR(dataset = H5Dopen(file, NAME)); \ - HDF5_ERROR(H5Dread(dataset, TYPE, MEM, H5S_ALL, H5P_DEFAULT, VAR)); \ + HDF5_ERROR(H5Dread(dataset, TYPE, H5S_ALL, H5S_ALL, H5P_DEFAULT, VAR)); \ + if (read_table_on_single_process) \ + BCAST (VAR, sizeof(*(VAR))*(NELEMS)); \ HDF5_ERROR(H5Dclose(dataset)); \ } while (0) // The second reads a given variable into a hyperslab of the alltables array -#define READ_EOSTABLE_HDF5(NAME,OFF) \ - do { \ - hsize_t offset[2] = {OFF,0}; \ - H5Sselect_hyperslab(mem3, H5S_SELECT_SET, offset, NULL, var3, NULL); \ - READ_EOS_HDF5(NAME,alltables,H5T_NATIVE_DOUBLE,mem3); \ +#define READ_BCAST_EOSTABLE_HDF5(NAME,OFF,DIMS) \ + do { \ + READ_BCAST_EOS_HDF5(NAME,&alltables[(OFF)*(DIMS)[1]],H5T_NATIVE_DOUBLE,(DIMS)[1]); \ } while (0) // Read size of tables CCTK_INT nrho, ntemp, nye; - READ_EOS_HDF5("pointsrho", &nrho, H5T_NATIVE_INT, H5S_ALL); - READ_EOS_HDF5("pointstemp", &ntemp, H5T_NATIVE_INT, H5S_ALL); - READ_EOS_HDF5("pointsye", &nye, H5T_NATIVE_INT, H5S_ALL); + READ_BCAST_EOS_HDF5("pointsrho", &nrho, H5T_NATIVE_INT, 1); + READ_BCAST_EOS_HDF5("pointstemp", &ntemp, H5T_NATIVE_INT, 1); + READ_BCAST_EOS_HDF5("pointsye", &nye, H5T_NATIVE_INT, 1); // Allocate memory for tables @@ -95,42 +111,39 @@ // Prepare HDF5 to read hyperslabs into alltables hsize_t table_dims[2] = {19, nrho * ntemp * nye}; - hsize_t var3[2] = { 1, nrho * ntemp * nye}; - hid_t mem3 = H5Screate_simple(2, table_dims, NULL); // Read alltables - READ_EOSTABLE_HDF5("logpress", 0); - READ_EOSTABLE_HDF5("logenergy", 1); - READ_EOSTABLE_HDF5("entropy", 2); - READ_EOSTABLE_HDF5("munu", 3); - READ_EOSTABLE_HDF5("cs2", 4); - READ_EOSTABLE_HDF5("dedt", 5); - READ_EOSTABLE_HDF5("dpdrhoe", 6); - READ_EOSTABLE_HDF5("dpderho", 7); + READ_BCAST_EOSTABLE_HDF5("logpress", 0, table_dims); + READ_BCAST_EOSTABLE_HDF5("logenergy", 1, table_dims); + READ_BCAST_EOSTABLE_HDF5("entropy", 2, table_dims); + READ_BCAST_EOSTABLE_HDF5("munu", 3, table_dims); + READ_BCAST_EOSTABLE_HDF5("cs2", 4, table_dims); + READ_BCAST_EOSTABLE_HDF5("dedt", 5, table_dims); + READ_BCAST_EOSTABLE_HDF5("dpdrhoe", 6, table_dims); + READ_BCAST_EOSTABLE_HDF5("dpderho", 7, table_dims); // chemical potentials - READ_EOSTABLE_HDF5("muhat", 8); - READ_EOSTABLE_HDF5("mu_e", 9); - READ_EOSTABLE_HDF5("mu_p", 10); - READ_EOSTABLE_HDF5("mu_n", 11); + READ_BCAST_EOSTABLE_HDF5("muhat", 8, table_dims); + READ_BCAST_EOSTABLE_HDF5("mu_e", 9, table_dims); + READ_BCAST_EOSTABLE_HDF5("mu_p", 10, table_dims); + READ_BCAST_EOSTABLE_HDF5("mu_n", 11, table_dims); // compositions - READ_EOSTABLE_HDF5("Xa", 12); - READ_EOSTABLE_HDF5("Xh", 13); - READ_EOSTABLE_HDF5("Xn", 14); - READ_EOSTABLE_HDF5("Xp", 15); + READ_BCAST_EOSTABLE_HDF5("Xa", 12, table_dims); + READ_BCAST_EOSTABLE_HDF5("Xh", 13, table_dims); + READ_BCAST_EOSTABLE_HDF5("Xn", 14, table_dims); + READ_BCAST_EOSTABLE_HDF5("Xp", 15, table_dims); // average nucleus - READ_EOSTABLE_HDF5("Abar", 16); - READ_EOSTABLE_HDF5("Zbar", 17); + READ_BCAST_EOSTABLE_HDF5("Abar", 16, table_dims); + READ_BCAST_EOSTABLE_HDF5("Zbar", 17, table_dims); // Gamma - READ_EOSTABLE_HDF5("gamma", 18); + READ_BCAST_EOSTABLE_HDF5("gamma", 18, table_dims); // Read additional tables and variables - READ_EOS_HDF5("logrho", logrho, H5T_NATIVE_DOUBLE, H5S_ALL); - READ_EOS_HDF5("logtemp", logtemp, H5T_NATIVE_DOUBLE, H5S_ALL); - READ_EOS_HDF5("ye", ye, H5T_NATIVE_DOUBLE, H5S_ALL); - READ_EOS_HDF5("energy_shift", &energy_shift, H5T_NATIVE_DOUBLE, H5S_ALL); + READ_BCAST_EOS_HDF5("logrho", logrho, H5T_NATIVE_DOUBLE, nrho); + READ_BCAST_EOS_HDF5("logtemp", logtemp, H5T_NATIVE_DOUBLE, ntemp); + READ_BCAST_EOS_HDF5("ye", ye, H5T_NATIVE_DOUBLE, nye); + READ_BCAST_EOS_HDF5("energy_shift", &energy_shift, H5T_NATIVE_DOUBLE, 1); - HDF5_ERROR(H5Sclose(mem3)); HDF5_ERROR(H5Fclose(file)); // Give all values to fortran - which will store pointers to them, so don't Directory: /trunk/test/ ======================= File [modified]: eos_omni.par Delta lines: +3 -0 =================================================================== --- trunk/test/eos_omni.par 2012-08-01 20:35:47 UTC (rev 64) +++ trunk/test/eos_omni.par 2012-08-09 21:52:00 UTC (rev 65) @@ -5,6 +5,9 @@ EOS_Omni::dump_nuceos_table = yes EOS_Omni::dump_nuceos_table_name = "TEST_TABLEEOS_rho4_temp4_ye4_version1.0_20120514.asc" +EOS_Omni::read_table_on_single_process = yes +EOS_Omni::reader_process = 1 + IO::out_dir = $parfile #IOASCII::out1D_every = 1 Directory: /trunk/ ================== File [modified]: configuration.ccl Delta lines: +3 -0 =================================================================== --- trunk/configuration.ccl 2012-08-01 20:35:47 UTC (rev 64) +++ trunk/configuration.ccl 2012-08-09 21:52:00 UTC (rev 65) @@ -5,3 +5,6 @@ LANG } +OPTIONAL MPI +{ +} File [modified]: param.ccl Delta lines: +9 -0 =================================================================== --- trunk/param.ccl 2012-08-01 20:35:47 UTC (rev 64) +++ trunk/param.ccl 2012-08-09 21:52:00 UTC (rev 65) @@ -80,6 +80,15 @@ .* :: "Can be anything" } "blah.h5" +BOOLEAN read_table_on_single_process "read table on one process only and bcast data" STEERABLE=ALWAYS +{ +} "no" + +INT reader_process "read table on this process and bcast data" STEERABLE=ALWAYS +{ + 0:* :: "read on process N" +} 0 + shares: IO USES STRING out_dir

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[svn:einsteintoolkit] GRHydro_InitData/trunk/src/ (Rev. 151)
by schnetter＠cct.lsu.edu 09 Aug '12

09 Aug '12

User: eschnett Date: 2012/08/09 03:02 PM Modified: /trunk/src/ GRHydro_BondiM_new.F90, GRHydro_Bondi_new.F90 Log: Define Pi with double precision File Changes: Directory: /trunk/src/ ====================== File [modified]: GRHydro_BondiM_new.F90 Delta lines: +1 -1 =================================================================== --- trunk/src/GRHydro_BondiM_new.F90 2012-08-09 06:27:00 UTC (rev 150) +++ trunk/src/GRHydro_BondiM_new.F90 2012-08-09 20:02:21 UTC (rev 151) @@ -31,7 +31,7 @@ #include "cctk_Functions.h" #include "GRHydro_Macros.h" -# define M_PI 3.14159265358979323846 /* pi */ +# define M_PI 3.14159265358979323846d0 /* pi */ !!$Newton-Raphson parameters: File [modified]: GRHydro_Bondi_new.F90 Delta lines: +1 -1 =================================================================== --- trunk/src/GRHydro_Bondi_new.F90 2012-08-09 06:27:00 UTC (rev 150) +++ trunk/src/GRHydro_Bondi_new.F90 2012-08-09 20:02:21 UTC (rev 151) @@ -31,7 +31,7 @@ #include "cctk_Functions.h" #include "GRHydro_Macros.h" -# define M_PI 3.14159265358979323846 /* pi */ +# define M_PI 3.14159265358979323846d0 /* pi */ !!$Newton-Raphson parameters:

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[svn:einsteintoolkit] GRHydro_InitData/trunk/ (Rev. 150)
by rhaas＠tapir.caltech.edu 08 Aug '12

08 Aug '12

User: rhaas Date: 2012/08/09 01:27 AM Modified: /trunk/ param.ccl /trunk/src/ GRHydro_AdvectedLoopM.F90, GRHydro_AlfvenWaveM.F90 Log: Fix to oblique case for Advected loop, new implementation of Alfven wave test including used-defined pressure (to alter wavespeed) and oblique case From: Josh Faber <jfaberrit(a)jfaber3.local> File Changes: Directory: /trunk/src/ ====================== File [modified]: GRHydro_AdvectedLoopM.F90 Delta lines: +3 -3 =================================================================== --- trunk/src/GRHydro_AdvectedLoopM.F90 2012-08-09 06:26:57 UTC (rev 149) +++ trunk/src/GRHydro_AdvectedLoopM.F90 2012-08-09 06:27:00 UTC (rev 150) @@ -133,9 +133,9 @@ dz = CCTK_DELTA_SPACE(3) !!$ Note that the 3D test wasn't deviced to be used with AMR! - range_x = (cctk_gsh(1)-1)*dx - range_y = (cctk_gsh(2)-1)*dy - range_z = (cctk_gsh(3)-1)*dz + range_x = (cctk_gsh(1)-2*cctk_nghostzones(1))*dx + range_y = (cctk_gsh(2)-2*cctk_nghostzones(2))*dy + range_z = (cctk_gsh(3)-2*cctk_nghostzones(3))*dz range_d = sqrt(range_z**2+range_x**2) diaglength = range_x*range_z/range_d File [modified]: GRHydro_AlfvenWaveM.F90 Delta lines: +53 -30 =================================================================== --- trunk/src/GRHydro_AlfvenWaveM.F90 2012-08-09 06:26:57 UTC (rev 149) +++ trunk/src/GRHydro_AlfvenWaveM.F90 2012-08-09 06:27:00 UTC (rev 150) @@ -65,6 +65,7 @@ CCTK_REAL :: dx,dy,dz CCTK_REAL :: range_x,range_y,range_z,range_d CCTK_REAL :: cos_theta, sin_theta + CCTK_REAL :: diaglength,xnew,vparallel,vperp,Bparallel,Bperp CCTK_REAL :: Bvecx_d, Bvecz_d CCTK_REAL :: velx_d, velz_d CCTK_REAL :: det @@ -77,10 +78,13 @@ !!$pressure, density, B^x, specific internal energy and enthalpy: rhoval = 1.0d0 - pressval = 1.0d0 + pressval = alfvenwave_pressure Bxval = 1.0d0 epsval = pressval/(gam-1.0d0)/rhoval hval = 1.0d0 + epsval + pressval/rhoval + +!!$ DZ: rho=P=Bxval=AA = 1 +!!$ Using DZ parameters, epsval=1.5, hval=3.5 !!$ Alfven Wave Amplitude: AA=1.0d0 @@ -91,6 +95,14 @@ t3 = 0.5d0*(1.0d0+sqrt(1.0d0-t2**2)) valf = sqrt(Bxval**2/t1/t3) + write(*,*)'Alfven velocity:',valf + +!!$ Using DZ parameters with P=1.0, we have: +!!$ t1=5.5 +!!$ t2=4/11 +!!$ t3=0.96577 +!!$ valf=0.43389 + !!$ Vx value: vxval=0.0d0 @@ -103,45 +115,56 @@ dz = CCTK_DELTA_SPACE(3) !!$ Note that the 3D test wasn't deviced to be used with AMR! - range_x = (cctk_gsh(1)-1)*dx - range_y = (cctk_gsh(2)-1)*dy - range_z = (cctk_gsh(3)-1)*dz + range_x = (cctk_gsh(1)-2*cctk_nghostzones(1))*dx + range_y = (cctk_gsh(2)-2*cctk_nghostzones(2))*dy + range_z = (cctk_gsh(3)-2*cctk_nghostzones(3))*dz - range_d = sqrt(range_z**2+range_x**2) - - cos_theta = range_z/range_d - sin_theta = range_x/range_d - !!$ Alfven wave number - wnbr = 2.0d0*pi/range_x do i=1,nx do j=1,ny do k=1,nz - - rho(i,j,k)=rhoval + + rho(i,j,k)=rhoval press(i,j,k)=pressval eps(i,j,k)=epsval - velx(i,j,k)=vxval - vely(i,j,k)=-valf*AA*cos(wnbr*x(i,j,k)) - velz(i,j,k)=-valf*AA*sin(wnbr*x(i,j,k)) - Bvecx(i,j,k)=Bxval - Bvecy(i,j,k)=AA*Bxval*cos(wnbr*x(i,j,k)) - Bvecz(i,j,k)=AA*Bxval*sin(wnbr*x(i,j,k)) + + if (CCTK_EQUALS(alfvenwave_type,"1D")) then + wnbr = 2.0d0*pi/range_x -!!$ if (CCTK_EQUALS(advectedloop_type,"3D")) then -!!$ Bvecx_d = cos_theta*Bvecx(i,j,k)+sin_theta*Bvecz(i,j,k) -!!$ Bvecz_d = cos_theta*Bvecz(i,j,k)-sin_theta*Bvecx(i,j,k) -!!$ velx_d = cos_theta*velx(i,j,k)+sin_theta*velz(i,j,k) -!!$ velz_d = cos_theta*velz(i,j,k)-sin_theta*velx(i,j,k) -!!$ -!!$ Bvecx(i,j,k) = Bvecx_d -!!$ Bvecz(i,j,k) = Bvecz_d -!!$ velx(i,j,k) = velx_d -!!$ velz(i,j,k) = velz_d -!!$ end if - + velx(i,j,k)=vxval + vely(i,j,k)=-valf*AA*cos(wnbr*x(i,j,k)) + velz(i,j,k)=-valf*AA*sin(wnbr*x(i,j,k)) + Bvecx(i,j,k)=Bxval + Bvecy(i,j,k)=AA*Bxval*cos(wnbr*x(i,j,k)) + Bvecz(i,j,k)=AA*Bxval*sin(wnbr*x(i,j,k)) + + else if (CCTK_EQUALS(alfvenwave_type,"2D")) then + + diaglength=range_x*range_y/range_d + range_d = sqrt(range_x**2+range_y**2) + cos_theta = range_y/range_d + sin_theta = range_x/range_d + wnbr = 2.0d0*pi/diaglength + + xnew = cos_theta*x(i,j,k)+sin_theta*y(i,j,k) + + vparallel=vxval + vperp=-valf*AA*cos(wnbr*xnew) + velx(i,j,k)=vparallel*cos_theta-vperp*sin_theta + vely(i,j,k)=vparallel*sin_theta+vperp*cos_theta + velz(i,j,k)=-valf*AA*sin(wnbr*xnew) + Bparallel=Bxval + Bperp=AA*Bxval*cos(wnbr*xnew) + Bvecx(i,j,k)=Bparallel*cos_theta-Bperp*sin_theta + Bvecy(i,j,k)=Bparallel*sin_theta+Bperp*cos_theta + Bvecz(i,j,k)=AA*Bxval*sin(wnbr*xnew) + + else + call CCTK_WARN(0,"Alfven wave case not recognized!") + end if + det=SPATIAL_DETERMINANT(gxx(i,j,k),gxy(i,j,k),gxz(i,j,k),gyy(i,j,k),gyz(i,j,k),gzz(i,j,k)) if (CCTK_EQUALS(GRHydro_eos_type,"Polytype")) then Directory: /trunk/ ================== File [modified]: param.ccl Delta lines: +14 -0 =================================================================== --- trunk/param.ccl 2012-08-09 06:26:57 UTC (rev 149) +++ trunk/param.ccl 2012-08-09 06:27:00 UTC (rev 150) @@ -191,6 +191,20 @@ "Numeric" :: "Finite difference approximation of the derivatives applied" } "Exact" +#################################3 +# Alfven Wave test +################################3 +KEYWORD alfvenwave_type "1-dimensional or 2-dimensional?" +{ + "1D" :: "1-dimensional" + "2D" :: "2-dimensional (in x-y plane)" +} "1D" + +CCTK_REAL alfvenwave_pressure "P_gas for the Alfven wave" +{ + (0:* :: "positive" +} 1.0 + ################################################################################## # BONDI PARAMETERS: (black hole mass specified by parameters from the "Exact" thorn) ##################################################################################

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[svn:einsteintoolkit] GRHydro_InitData/trunk/ (Rev. 149)
by rhaas＠tapir.caltech.edu 08 Aug '12

08 Aug '12

User: rhaas Date: 2012/08/09 01:26 AM Modified: /trunk/ param.ccl /trunk/src/ GRHydro_MonopoleM.F90 Log: Slight tweaks to the monopole routine options (patch by Josh) From: Bruno Coutinho Mundim <bcmsma(a)astro.rit.edu> File Changes: Directory: /trunk/src/ ====================== File [modified]: GRHydro_MonopoleM.F90 Delta lines: +26 -5 =================================================================== --- trunk/src/GRHydro_MonopoleM.F90 2012-08-09 06:26:55 UTC (rev 148) +++ trunk/src/GRHydro_MonopoleM.F90 2012-08-09 06:26:57 UTC (rev 149) @@ -71,9 +71,14 @@ vely(i,j,k) = 0.0 velz(i,j,k) = 0.0 eps(i,j,k) = 0.1 + + Bvecx(i,j,k)=0.0 + Bvecy(i,j,k)=0.0 + Bvecz(i,j,k)=0.0 + if(CCTK_EQUALS(monopole_type,"Point")) then if(i.eq.nx/2+1.and.j.eq.ny/2+1.and.k.eq.nz/2+1) then - Bvecx(i,j,k)=0.1 + Bvecx(i,j,k)=Monopole_point_Bx else Bvecx(i,j,k)=0.0 endif @@ -93,7 +98,7 @@ else Bvecx(i,j,k) = 0.0 endif - if(mod(i+j,2).eq.0)Bvecx(i,j,k)=-1.0*Bvecx(i,j,k) + if(mod(i+j+k,2).eq.0)Bvecx(i,j,k)=-1.0*Bvecx(i,j,k) else if(CCTK_EQUALS(monopole_type,"2dalt")) then rr2=x(i,j,k)**2+y(i,j,k)**2+z(i,j,k)**2 rg2=R_Gauss*R_Gauss @@ -104,17 +109,33 @@ Bvecx(i,j,k) = 0.0 Bvecy(i,j,k) = 0.0 endif + if(mod(i+j+k,2).eq.0)then + Bvecx(i,j,k)=-1.0*Bvecx(i,j,k) +!!$ Only vary one component, for different character +!!$ Bvecy(i,j,k)=-1.0*Bvecy(i,j,k) + endif + else if(CCTK_EQUALS(monopole_type,"3dalt")) then + rr2=x(i,j,k)**2+y(i,j,k)**2+z(i,j,k)**2 + rg2=R_Gauss*R_Gauss + if(rr2.lt.rg2) then + Bvecx(i,j,k) = exp(-1.0*rr2/rg2)-1.0/exp(1.0) + Bvecy(i,j,k) = exp(-1.0*rr2/rg2)-1.0/exp(1.0) + Bvecz(i,j,k) = exp(-1.0*rr2/rg2)-1.0/exp(1.0) + else + Bvecx(i,j,k) = 0.0 + Bvecy(i,j,k) = 0.0 + Bvecz(i,j,k) = 0.0 + endif +!!$ Different spatial pattern! if(mod(i+j,2).eq.0)then Bvecx(i,j,k)=-1.0*Bvecx(i,j,k) Bvecy(i,j,k)=-1.0*Bvecy(i,j,k) + Bvecz(i,j,k)=-1.0*Bvecz(i,j,k) endif else call CCTK_WARN(0,"Unrecognized monopole type!!!") endif - Bvecy(i,j,k)=0.0 - Bvecz(i,j,k)=0.0 - det=SPATIAL_DETERMINANT(gxx(i,j,k),gxy(i,j,k),gxz(i,j,k),gyy(i,j,k),gyz(i,j,k),gzz(i,j,k)) if (CCTK_EQUALS(GRHydro_eos_type,"Polytype")) then Directory: /trunk/ ================== File [modified]: param.ccl Delta lines: +6 -0 =================================================================== --- trunk/param.ccl 2012-08-09 06:26:55 UTC (rev 148) +++ trunk/param.ccl 2012-08-09 06:26:57 UTC (rev 149) @@ -147,6 +147,7 @@ "Gauss" :: "Gaussian w/radius R_Gauss" "1dalt" :: "1-d alternating" "2dalt" :: "2-d alternating" + "3dalt" :: "3-d alternating" } "Point" CCTK_REAL R_Gauss "Radius for a Gaussian monopole" @@ -154,6 +155,11 @@ 0:* :: "Any positive number" } 1.0 +CCTK_REAL Monopole_point_Bx "Pointlike Monopole Bx value" +{ + *:* :: "Any number" +} 1.0 + # For cylindrical explosion test: CCTK_REAL cyl_r_inner "Inner Radius" {

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[svn:einsteintoolkit] GRHydro_InitData/trunk/ (Rev. 148)
by rhaas＠tapir.caltech.edu 08 Aug '12

08 Aug '12

User: rhaas Date: 2012/08/09 01:26 AM Modified: /trunk/ param.ccl /trunk/src/ GRHydro_Bondi_new.F90 Log: Added option to smooth metric inside horizon Signed-off-by: Bruno Coutinho Mundim <bcmsma(a)astro.rit.edu> File Changes: Directory: /trunk/src/ ====================== File [modified]: GRHydro_Bondi_new.F90 Delta lines: +11 -2 =================================================================== --- trunk/src/GRHydro_Bondi_new.F90 2012-08-09 06:26:54 UTC (rev 147) +++ trunk/src/GRHydro_Bondi_new.F90 2012-08-09 06:26:55 UTC (rev 148) @@ -55,7 +55,7 @@ CCTK_REAL :: M, Msq, Mdot, rs, gam, rmin_bondi, rmax_bondi, cs_sq,cs,vs_sq,vs,rhos,gtemp,hs, Kval, Qdot CCTK_REAL :: logrmin,dlogr,rhotmp,utmp,vtmp,rspher CCTK_REAL :: r_bondi(N_points), logr_bondi(N_points), rho_bondi(N_points), u_bondi(N_points), v_bondi(N_points) - CCTK_REAL :: drhodr, det, rhocheck, rhocheck2, riso, rnew, rsch, ucheck + CCTK_REAL :: drhodr, det, rhocheck, rhocheck2, riso, rnew, rsch, ucheck, psinew CCTK_REAL :: uiso, uisocheck, vcheck, ucheck2, vcheck2, xhat,yhat, zhat, xp, yp, zp !!$set_bondi_parameters @@ -169,7 +169,16 @@ yhat = yp/riso zhat = zp/riso - if(riso < 1.0e-7) then + if(use_smooth_puncture_data.ne.0 .and. riso.lt.M) then + psinew=2.875 - 5*(riso/M)**2 + 6*(riso/M)**4 + gxx(i,j,k) = psinew**4 + gyy(i,j,k) = psinew**4 + gzz(i,j,k) = psinew**4 + gxy(i,j,k) = 0.0 + gxz(i,j,k) = 0.0 + gyz(i,j,k) = 0.0 + + else if(riso < 1.0e-7) then gxx(i,j,k) = 1.0e4 gyy(i,j,k) = 1.0e4 gzz(i,j,k) = 1.0e4 Directory: /trunk/ ================== File [modified]: param.ccl Delta lines: +4 -0 =================================================================== --- trunk/param.ccl 2012-08-09 06:26:54 UTC (rev 147) +++ trunk/param.ccl 2012-08-09 06:26:55 UTC (rev 148) @@ -97,6 +97,10 @@ 0.0:* :: "Anything positive" } 1.0 +BOOLEAN use_smooth_puncture_data "Smooth puncture solution inside R=M using 4th order matching polynomial" +{ +} "no" + BOOLEAN change_shock_direction "Change the shock direction" { } "no"

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[svn:einsteintoolkit] GRHydro_InitData/trunk/par/ (Rev. 147)
by rhaas＠tapir.caltech.edu 08 Aug '12

08 Aug '12

User: rhaas Date: 2012/08/09 01:26 AM Added: /trunk/par/ advectedloop2D_hi.par, advectedloop2D_vz_hi.par Log: high resolution advectedloop2D par files. From: Bruno Coutinho Mundim <bcmsma(a)astro.rit.edu> File Changes: Directory: /trunk/par/ ====================== File [added]: advectedloop2D_hi.par Delta lines: +398 -0 =================================================================== --- trunk/par/advectedloop2D_hi.par (rev 0) +++ trunk/par/advectedloop2D_hi.par 2012-08-09 06:26:54 UTC (rev 147) @@ -0,0 +1,398 @@ +#============================================================================== +# Advected magnetic field loop (2d version): GRHydro_InitData +#============================================================================== + +#------------------------------------------------------------------------------ +# Cactus parameters: +#------------------------------------------------------------------------------ +Cactus::cctk_run_title = "Advected magnetic field loop (2d version)" +Cactus::cctk_full_warnings = "yes" + +#Cactus::terminate = "never" +Cactus::terminate = "time" +Cactus::cctk_final_time = 25.0 +#Cactus::terminate = "iteration" +#Cactus::cctk_itlast = 0 +#Cactus::cctk_itlast = 256 +#Cactus::terminate="runtime" +#Cactus::max_runtime=28800 # 46 days +#Cactus::max_runtime=1410 # 23.5 hours +#Cactus::max_runtime=1380 # 23 hours +#Cactus::max_runtime=690 # 11.5 hours +#Cactus::max_runtime=450 # 7.5 hours +#Cactus::max_runtime=210 # 3.5 hours + +#------------------------------------------------------------------------------ +# Activate all necessary thorns: +#------------------------------------------------------------------------------ + +ActiveThorns = "Boundary CartGrid3D CoordBase Fortran InitBase IOUtil LocalReduce SymBase Time" +ActiveThorns = "AEILocalInterp LocalInterp" +ActiveThorns = "MoL Periodic Slab SpaceMask" +ActiveThorns = "Carpet CarpetInterp CarpetIOASCII CarpetIOHDF5 CarpetIOScalar CarpetLib CarpetIOBasic CarpetReduce CarpetRegrid2 CarpetSlab LoopControl" +#ActiveThorns = "Formaline NaNChecker TerminationTrigger TimerReport" +ActiveThorns = "NaNChecker TerminationTrigger TimerReport" +ActiveThorns = "ADMbase ADMcoupling ADMmacros CoordGauge StaticConformal" +ActiveThorns = "Constants TmunuBase HydroBase " +ActiveThorns = "EOS_Omni" +ActiveThorns = "GRHydro GRHydro_InitData" +ActiveThorns = "HDF5" +ActiveThorns = "SystemStatistics" + +#------------------------------------------------------------------------------ +# Diagnostic parameters: +#------------------------------------------------------------------------------ +#AHFinderDirect::verbose_level = "physics details" + +Carpet::output_timers_every = 1024 +Carpet::output_timer_tree_every = 256 +Carpet::output_initialise_timer_tree = "yes" +Carpet::storage_verbose = "no" +#Carpet::timers_verbose = "no" +#Carpet::verbose = "yes" # only for Initial Data +Carpet::verbose = "no" +Carpet::veryverbose = "no" +Carpet::grid_structure_filename = "carpet-grid-structure.asc" +Carpet::grid_coordinates_filename = "carpet-grid-coordinates.asc" + +CarpetLib::output_bboxes = "no" +CarpetLib::print_memstats_every = 1024 +CarpetLib::memstat_file = "carpetlib-memory-statistics.asc" +#CarpetLib::print_timestats_every = 1024 +#CarpetLib::timestat_file = "carpetlib-timing-statistics.asc" + +CarpetReduce::verbose = "no" +CarpetRegrid2::verbose = "yes" +#CarpetRegrid2::veryverbose = "yes" + +#NaNChecker::verbose = "all" + +TimerReport::out_every = 1024 +TimerReport::out_filename = "TimerReport" +#TimerReport::output_all_timers = "yes" +#TimerReport::output_all_timers_together = "yes" +#TimerReport::output_all_timers_readable = "yes" +#TimerReport::before_checkpoint = "yes" +TimerReport::n_top_timers = 40 + +#------------------------------------------------------------------------------ +# Utility parameters: +#------------------------------------------------------------------------------ + +#NaNChecker::check_every = 16 +NaNChecker::check_every = 1 +NaNChecker::check_vars = " + HydroBase::Bvec + HydroBase::rho + HydroBase::eps + HydroBase::press + HydroBase::vel + HydroBase::w_lorentz +" +NaNChecker::action_if_found = "terminate" +#NaNChecker::action_if_found = "abort" +#NaNChecker::action_if_found = "just warn" #"terminate", "just warn", "abort" +#NaNChecker::check_after=0 + +#TerminationTrigger::max_walltime = 0.0 # hours +TerminationTrigger::max_walltime = 12.0 # hours +TerminationTrigger::on_remaining_walltime = 10.0 # minutes +TerminationTrigger::termination_from_file = "yes" +TerminationTrigger::create_termination_file = "yes" +TerminationTrigger::termination_file = "../TERMINATE" + + +#------------------------------------------------------------------------------ +# Run parameters: +#------------------------------------------------------------------------------ + +#------ +# Grid: +#------ + +Time::dtfac = 0.4 +MoL::ODE_Method = "rk2" +MoL::MoL_Intermediate_Steps = 2 +#MoL::ODE_Method = "rk4" +#MoL::MoL_Intermediate_Steps = 4 +#MoL::MoL_Num_Scratch_Levels = 1 + +CartGrid3D::type = "coordbase" +CartGrid3D::domain = "full" +CartGrid3D::avoid_origin = "no" + +CoordBase::domainsize = "minmax" +CoordBase::spacing = "gridspacing" # "gridspacing" or "numcells" + +CoordBase::xmin = -1.0 +CoordBase::ymin = -0.5 +#CoordBase::zmin = -0.031250 +#CoordBase::zmin = -0.015625 +CoordBase::zmin = -0.0078125 +CoordBase::xmax = 1.0 +CoordBase::ymax = 0.5 +#CoordBase::zmax = 0.031250 +#CoordBase::zmax = 0.015625 +CoordBase::zmax = 0.0078125 +#CoordBase::dx = 0.0156250 # dx or ncells_x +#CoordBase::dy = 0.0156250 # dy or ncells_y +#CoordBase::dz = 0.0156250 # dz or ncells_z +CoordBase::dx = 0.00390625 # dx or ncells_x +CoordBase::dy = 0.00390625 # dy or ncells_y +CoordBase::dz = 0.00390625 # dz or ncells_z + +CoordBase::boundary_size_x_lower = 3 +CoordBase::boundary_size_y_lower = 3 +CoordBase::boundary_size_z_lower = 3 +CoordBase::boundary_size_x_upper = 3 +CoordBase::boundary_size_y_upper = 3 +CoordBase::boundary_size_z_upper = 3 +CoordBase::boundary_shiftout_x_lower = 0 +CoordBase::boundary_shiftout_y_lower = 0 +CoordBase::boundary_shiftout_z_lower = 0 +CoordBase::boundary_shiftout_x_upper = 0 +CoordBase::boundary_shiftout_y_upper = 0 +CoordBase::boundary_shiftout_z_upper = 0 +CoordBase::boundary_staggered_x_lower = "yes" +CoordBase::boundary_staggered_y_lower = "yes" +CoordBase::boundary_staggered_z_lower = "yes" +CoordBase::boundary_staggered_x_upper = "yes" +CoordBase::boundary_staggered_y_upper = "yes" +CoordBase::boundary_staggered_z_upper = "yes" + +Driver::ghost_size = 3 +GRHydro::GRHydro_stencil = 3 + +Periodic::periodic = "yes" +Periodic::periodic_x = "yes" +Periodic::periodic_y = "yes" +Periodic::periodic_z = "yes" + +# General Carpet parameters: +Carpet::domain_from_coordbase = "yes" +Carpet::enable_all_storage = "no" +Carpet::schedule_barriers = "no" + +CarpetLib::poison_new_memory = "yes" +CarpetLib::poison_value = 114 +CarpetLib::check_bboxes = "no" +CarpetLib::interleave_communications = "yes" +#CarpetLib::vary_tags = "yes" # git version only! +CarpetLib::combine_sends = "yes" +#CarpetLib::reduce_mpi_waitall = "yes" # git version only! + +CarpetInterp::tree_search = "yes" +CarpetInterp::check_tree_search = "no" + +#------ +# MODEL: +#------ + +HydroBase::initial_hydro = "advectedloop" + +GRHydro_InitData::advectedloop_type = "2D" +#GRHydro_InitData::advectedloop_case = "V^z/=0" +GRHydro_InitData::advectedloop_case = "V^z=0" +GRHydro_InitData::advectedloop_delA = "Exact" +#GRHydro_InitData::advectedloop_delA = "Numeric" + +EOS_Omni::gl_gamma = 1.666666666666667 +GRHydro::initial_Gamma = 1.666666666666667 + +#---------- +# Numerics: +#---------- + +#TmunuBase::stress_energy_storage = "yes" +#TmunuBase::stress_energy_at_RHS = "no" +#TmunuBase::timelevels = 1 +#TmunuBase::prolongation_type = "none" +#TmunuBase::support_old_CalcTmunu_mechanism = "no" + +HydroBase::timelevels = 2 +#HydroBase::timelevels = 3 + +SpaceMask::use_mask = "yes" + +#----------- +# Evolution: +#----------- + +HydroBase::evolution_method = "GRHydro" +HydroBase::Bvec_evolution_method = "GRHydro" + +GRHydro::method_type = "RSA FV" +GRHydro::recon_method = "tvd" +GRHydro::tvd_limiter = "vanleerMC2" +GRHydro::recon_vars = "primitive" +GRHydro::riemann_solver = "HLLE" +GRHydro::bound = "none" +GRHydro::GRHydro_eos_type = "General" +GRHydro::GRHydro_eos_table = "Ideal_Fluid" + +GRHydro::Grhydro_MaxNumConstrainedVars = 13 +GRHydro::GRHydro_MaxNumEvolvedVars = 10 + +GRHydro::clean_divergence = "yes" +GRHydro::kap_dc = 10.0 +GRHydro::track_divB = "yes" +GRHydro::calculate_bcom = "yes" + +GRHydro::psidcspeed = "light speed" +GRHydro::decouple_normal_Bfield = "yes" + +#------------------------------------------------------------------------------ +# Output: +#------------------------------------------------------------------------------ + +IO::out_dir = $parfile +IO::out_fileinfo = "none" + +IOBasic::outInfo_every = 1 +IOBasic::outInfo_reductions = "maximum" +IOBasic::outInfo_vars = " + Carpet::physical_time_per_hour + GRHydro::bcom_sq + HydroBase::press + HydroBase::rho + SystemStatistics::maxrss_mb +" + +IOScalar::outScalar_every = 640 #t=1 +IOScalar::one_file_per_group = "yes" +IOScalar::outScalar_reductions = "minimum maximum average norm1 norm2" +IOScalar::outScalar_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GrHydro::divB + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz + SystemStatistics::process_memory_mb +" + +IOASCII::one_file_per_group = "yes" +IOASCII::output_symmetry_points = "no" +IOASCII::output_ghost_points = "no" #hg version only! +IOASCII::output_boundary_points = "no" #hg version only! +#IOASCII::out3D_ghosts = "no" #hg (DEPRECATED) +#IOASCII::out3D_outer_ghosts = "no" #hg (DEPRECATED) + +IOASCII::out0D_every = 640 +IOASCII::out0D_vars = " + Carpet::timing +" + +#Set these IOASCII options for initial data only: +IOASCII::out1D_every = 15360 +#IOASCII::out1D_dt = 10 +IOASCII::out1D_d = "yes" +IOASCII::out1D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GrHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +#IOASCII::out2D_every = 256000000 +#IOASCII::out2D_vars = " +# GRHydro::bcom +# GRHydro::bcom0 +# GRHydro::bcom_sq +# GRHydro::Bcons +# GRHydro::dens +# GrHydro::divB +# GRHydro::scon +# GRHydro::tau +# HydroBase::Bvec +# HydroBase::eps +# HydroBase::press +# HydroBase::rho +# HydroBase::vel +# HydroBase::w_lorentz +#" + +CarpetIOHDF5::one_file_per_group = "yes" +CarpetIOHDF5::open_one_input_file_at_a_time = "yes" + +CarpetIOHDF5::output_symmetry_points = "yes" +CarpetIOHDF5::output_ghost_points = "yes" +CarpetIOHDF5::output_boundary_points = "yes" +CarpetIOHDF5::output_buffer_points = "yes" + +CarpetIOHDF5::out2D_every = 320 +CarpetIOHDF5::out2D_xy = "yes" +CarpetIOHDF5::out2D_xz = "no" +CarpetIOHDF5::out2D_yz = "no" +CarpetIOHDF5::out2D_xyplane_z = 0.0 +CarpetIOHDF5::out2D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GRHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + Grid::coordinates + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +CarpetIOHDF5::out3D_every = 3840 +CarpetIOHDF5::out3D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::divB + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +#------------------------------------------------------------------------------ +# Analysis: +#------------------------------------------------------------------------------ + +#------------------------------------------------------------------------------ +# Checkpoint/Recovery: +#------------------------------------------------------------------------------ +#IOHDF5::checkpoint = "yes" +#IO::checkpoint_dir = $parfile +#IO::checkpoint_ID = "yes" +#IO::checkpoint_every = 6144 +##IO::checkpoint_every_walltime_hours = 6.0 +#IO::checkpoint_keep=3 +#IO::checkpoint_on_terminate = "yes" + +#IO::recover = "autoprobe" +#IO::recover_dir = $parfile + + File [added]: advectedloop2D_vz_hi.par Delta lines: +398 -0 =================================================================== --- trunk/par/advectedloop2D_vz_hi.par (rev 0) +++ trunk/par/advectedloop2D_vz_hi.par 2012-08-09 06:26:54 UTC (rev 147) @@ -0,0 +1,398 @@ +#============================================================================== +# Advected magnetic field loop (2d version): GRHydro_InitData +#============================================================================== + +#------------------------------------------------------------------------------ +# Cactus parameters: +#------------------------------------------------------------------------------ +Cactus::cctk_run_title = "Advected magnetic field loop (2d version)" +Cactus::cctk_full_warnings = "yes" + +#Cactus::terminate = "never" +Cactus::terminate = "time" +Cactus::cctk_final_time = 25.0 +#Cactus::terminate = "iteration" +#Cactus::cctk_itlast = 0 +#Cactus::cctk_itlast = 256 +#Cactus::terminate="runtime" +#Cactus::max_runtime=28800 # 46 days +#Cactus::max_runtime=1410 # 23.5 hours +#Cactus::max_runtime=1380 # 23 hours +#Cactus::max_runtime=690 # 11.5 hours +#Cactus::max_runtime=450 # 7.5 hours +#Cactus::max_runtime=210 # 3.5 hours + +#------------------------------------------------------------------------------ +# Activate all necessary thorns: +#------------------------------------------------------------------------------ + +ActiveThorns = "Boundary CartGrid3D CoordBase Fortran InitBase IOUtil LocalReduce SymBase Time" +ActiveThorns = "AEILocalInterp LocalInterp" +ActiveThorns = "MoL Periodic Slab SpaceMask" +ActiveThorns = "Carpet CarpetInterp CarpetIOASCII CarpetIOHDF5 CarpetIOScalar CarpetLib CarpetIOBasic CarpetReduce CarpetRegrid2 CarpetSlab LoopControl" +#ActiveThorns = "Formaline NaNChecker TerminationTrigger TimerReport" +ActiveThorns = "NaNChecker TerminationTrigger TimerReport" +ActiveThorns = "ADMbase ADMcoupling ADMmacros CoordGauge StaticConformal" +ActiveThorns = "Constants TmunuBase HydroBase " +ActiveThorns = "EOS_Omni" +ActiveThorns = "GRHydro GRHydro_InitData" +ActiveThorns = "HDF5" +ActiveThorns = "SystemStatistics" + +#------------------------------------------------------------------------------ +# Diagnostic parameters: +#------------------------------------------------------------------------------ +#AHFinderDirect::verbose_level = "physics details" + +Carpet::output_timers_every = 1024 +Carpet::output_timer_tree_every = 256 +Carpet::output_initialise_timer_tree = "yes" +Carpet::storage_verbose = "no" +#Carpet::timers_verbose = "no" +#Carpet::verbose = "yes" # only for Initial Data +Carpet::verbose = "no" +Carpet::veryverbose = "no" +Carpet::grid_structure_filename = "carpet-grid-structure.asc" +Carpet::grid_coordinates_filename = "carpet-grid-coordinates.asc" + +CarpetLib::output_bboxes = "no" +CarpetLib::print_memstats_every = 1024 +CarpetLib::memstat_file = "carpetlib-memory-statistics.asc" +#CarpetLib::print_timestats_every = 1024 +#CarpetLib::timestat_file = "carpetlib-timing-statistics.asc" + +CarpetReduce::verbose = "no" +CarpetRegrid2::verbose = "yes" +#CarpetRegrid2::veryverbose = "yes" + +#NaNChecker::verbose = "all" + +TimerReport::out_every = 1024 +TimerReport::out_filename = "TimerReport" +#TimerReport::output_all_timers = "yes" +#TimerReport::output_all_timers_together = "yes" +#TimerReport::output_all_timers_readable = "yes" +#TimerReport::before_checkpoint = "yes" +TimerReport::n_top_timers = 40 + +#------------------------------------------------------------------------------ +# Utility parameters: +#------------------------------------------------------------------------------ + +#NaNChecker::check_every = 16 +NaNChecker::check_every = 1 +NaNChecker::check_vars = " + HydroBase::Bvec + HydroBase::rho + HydroBase::eps + HydroBase::press + HydroBase::vel + HydroBase::w_lorentz +" +NaNChecker::action_if_found = "terminate" +#NaNChecker::action_if_found = "abort" +#NaNChecker::action_if_found = "just warn" #"terminate", "just warn", "abort" +#NaNChecker::check_after=0 + +#TerminationTrigger::max_walltime = 0.0 # hours +TerminationTrigger::max_walltime = 12.0 # hours +TerminationTrigger::on_remaining_walltime = 10.0 # minutes +TerminationTrigger::termination_from_file = "yes" +TerminationTrigger::create_termination_file = "yes" +TerminationTrigger::termination_file = "../TERMINATE" + + +#------------------------------------------------------------------------------ +# Run parameters: +#------------------------------------------------------------------------------ + +#------ +# Grid: +#------ + +Time::dtfac = 0.4 +MoL::ODE_Method = "rk2" +MoL::MoL_Intermediate_Steps = 2 +#MoL::ODE_Method = "rk4" +#MoL::MoL_Intermediate_Steps = 4 +#MoL::MoL_Num_Scratch_Levels = 1 + +CartGrid3D::type = "coordbase" +CartGrid3D::domain = "full" +CartGrid3D::avoid_origin = "no" + +CoordBase::domainsize = "minmax" +CoordBase::spacing = "gridspacing" # "gridspacing" or "numcells" + +CoordBase::xmin = -1.0 +CoordBase::ymin = -0.5 +#CoordBase::zmin = -0.031250 +#CoordBase::zmin = -0.015625 +CoordBase::zmin = -0.0078125 +CoordBase::xmax = 1.0 +CoordBase::ymax = 0.5 +#CoordBase::zmax = 0.031250 +#CoordBase::zmax = 0.015625 +CoordBase::zmax = 0.0078125 +#CoordBase::dx = 0.0156250 # dx or ncells_x +#CoordBase::dy = 0.0156250 # dy or ncells_y +#CoordBase::dz = 0.0156250 # dz or ncells_z +CoordBase::dx = 0.00390625 # dx or ncells_x +CoordBase::dy = 0.00390625 # dy or ncells_y +CoordBase::dz = 0.00390625 # dz or ncells_z + +CoordBase::boundary_size_x_lower = 3 +CoordBase::boundary_size_y_lower = 3 +CoordBase::boundary_size_z_lower = 3 +CoordBase::boundary_size_x_upper = 3 +CoordBase::boundary_size_y_upper = 3 +CoordBase::boundary_size_z_upper = 3 +CoordBase::boundary_shiftout_x_lower = 0 +CoordBase::boundary_shiftout_y_lower = 0 +CoordBase::boundary_shiftout_z_lower = 0 +CoordBase::boundary_shiftout_x_upper = 0 +CoordBase::boundary_shiftout_y_upper = 0 +CoordBase::boundary_shiftout_z_upper = 0 +CoordBase::boundary_staggered_x_lower = "yes" +CoordBase::boundary_staggered_y_lower = "yes" +CoordBase::boundary_staggered_z_lower = "yes" +CoordBase::boundary_staggered_x_upper = "yes" +CoordBase::boundary_staggered_y_upper = "yes" +CoordBase::boundary_staggered_z_upper = "yes" + +Driver::ghost_size = 3 +GRHydro::GRHydro_stencil = 3 + +Periodic::periodic = "yes" +Periodic::periodic_x = "yes" +Periodic::periodic_y = "yes" +Periodic::periodic_z = "yes" + +# General Carpet parameters: +Carpet::domain_from_coordbase = "yes" +Carpet::enable_all_storage = "no" +Carpet::schedule_barriers = "no" + +CarpetLib::poison_new_memory = "yes" +CarpetLib::poison_value = 114 +CarpetLib::check_bboxes = "no" +CarpetLib::interleave_communications = "yes" +#CarpetLib::vary_tags = "yes" # git version only! +CarpetLib::combine_sends = "yes" +#CarpetLib::reduce_mpi_waitall = "yes" # git version only! + +CarpetInterp::tree_search = "yes" +CarpetInterp::check_tree_search = "no" + +#------ +# MODEL: +#------ + +HydroBase::initial_hydro = "advectedloop" + +GRHydro_InitData::advectedloop_type = "2D" +GRHydro_InitData::advectedloop_case = "V^z/=0" +#GRHydro_InitData::advectedloop_case = "V^z=0" +GRHydro_InitData::advectedloop_delA = "Exact" +#GRHydro_InitData::advectedloop_delA = "Numeric" + +EOS_Omni::gl_gamma = 1.666666666666667 +GRHydro::initial_Gamma = 1.666666666666667 + +#---------- +# Numerics: +#---------- + +#TmunuBase::stress_energy_storage = "yes" +#TmunuBase::stress_energy_at_RHS = "no" +#TmunuBase::timelevels = 1 +#TmunuBase::prolongation_type = "none" +#TmunuBase::support_old_CalcTmunu_mechanism = "no" + +HydroBase::timelevels = 2 +#HydroBase::timelevels = 3 + +SpaceMask::use_mask = "yes" + +#----------- +# Evolution: +#----------- + +HydroBase::evolution_method = "GRHydro" +HydroBase::Bvec_evolution_method = "GRHydro" + +GRHydro::method_type = "RSA FV" +GRHydro::recon_method = "tvd" +GRHydro::tvd_limiter = "vanleerMC2" +GRHydro::recon_vars = "primitive" +GRHydro::riemann_solver = "HLLE" +GRHydro::bound = "none" +GRHydro::GRHydro_eos_type = "General" +GRHydro::GRHydro_eos_table = "Ideal_Fluid" + +GRHydro::Grhydro_MaxNumConstrainedVars = 13 +GRHydro::GRHydro_MaxNumEvolvedVars = 10 + +GRHydro::clean_divergence = "yes" +GRHydro::kap_dc = 10.0 +GRHydro::track_divB = "yes" +GRHydro::calculate_bcom = "yes" + +GRHydro::psidcspeed = "light speed" +GRHydro::decouple_normal_Bfield = "yes" + +#------------------------------------------------------------------------------ +# Output: +#------------------------------------------------------------------------------ + +IO::out_dir = $parfile +IO::out_fileinfo = "none" + +IOBasic::outInfo_every = 1 +IOBasic::outInfo_reductions = "maximum" +IOBasic::outInfo_vars = " + Carpet::physical_time_per_hour + GRHydro::bcom_sq + HydroBase::press + HydroBase::rho + SystemStatistics::maxrss_mb +" + +IOScalar::outScalar_every = 640 #t=1 +IOScalar::one_file_per_group = "yes" +IOScalar::outScalar_reductions = "minimum maximum average norm1 norm2" +IOScalar::outScalar_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GrHydro::divB + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz + SystemStatistics::process_memory_mb +" + +IOASCII::one_file_per_group = "yes" +IOASCII::output_symmetry_points = "no" +IOASCII::output_ghost_points = "no" #hg version only! +IOASCII::output_boundary_points = "no" #hg version only! +#IOASCII::out3D_ghosts = "no" #hg (DEPRECATED) +#IOASCII::out3D_outer_ghosts = "no" #hg (DEPRECATED) + +IOASCII::out0D_every = 640 +IOASCII::out0D_vars = " + Carpet::timing +" + +#Set these IOASCII options for initial data only: +IOASCII::out1D_every = 15360 +#IOASCII::out1D_dt = 10 +IOASCII::out1D_d = "yes" +IOASCII::out1D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GrHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +#IOASCII::out2D_every = 256000000 +#IOASCII::out2D_vars = " +# GRHydro::bcom +# GRHydro::bcom0 +# GRHydro::bcom_sq +# GRHydro::Bcons +# GRHydro::dens +# GrHydro::divB +# GRHydro::scon +# GRHydro::tau +# HydroBase::Bvec +# HydroBase::eps +# HydroBase::press +# HydroBase::rho +# HydroBase::vel +# HydroBase::w_lorentz +#" + +CarpetIOHDF5::one_file_per_group = "yes" +CarpetIOHDF5::open_one_input_file_at_a_time = "yes" + +CarpetIOHDF5::output_symmetry_points = "yes" +CarpetIOHDF5::output_ghost_points = "yes" +CarpetIOHDF5::output_boundary_points = "yes" +CarpetIOHDF5::output_buffer_points = "yes" + +CarpetIOHDF5::out2D_every = 320 +CarpetIOHDF5::out2D_xy = "yes" +CarpetIOHDF5::out2D_xz = "no" +CarpetIOHDF5::out2D_yz = "no" +CarpetIOHDF5::out2D_xyplane_z = 0.0 +CarpetIOHDF5::out2D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GRHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + Grid::coordinates + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +CarpetIOHDF5::out3D_every = 3840 +CarpetIOHDF5::out3D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::divB + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +#------------------------------------------------------------------------------ +# Analysis: +#------------------------------------------------------------------------------ + +#------------------------------------------------------------------------------ +# Checkpoint/Recovery: +#------------------------------------------------------------------------------ +#IOHDF5::checkpoint = "yes" +#IO::checkpoint_dir = $parfile +#IO::checkpoint_ID = "yes" +#IO::checkpoint_every = 6144 +##IO::checkpoint_every_walltime_hours = 6.0 +#IO::checkpoint_keep=3 +#IO::checkpoint_on_terminate = "yes" + +#IO::recover = "autoprobe" +#IO::recover_dir = $parfile + +

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[svn:einsteintoolkit] GRHydro_InitData/trunk/par/ (Rev. 146)
by rhaas＠tapir.caltech.edu 08 Aug '12

08 Aug '12

User: rhaas Date: 2012/08/09 01:26 AM Added: /trunk/par/ balsara2_2d.par, balsara3_2d.par, balsara4_2d.par, balsara5_2d.par Log: update balsara par files From: Bruno Coutinho Mundim <bcmsma(a)astro.rit.edu> File Changes: Directory: /trunk/par/ ====================== File [added]: balsara2_2d.par Delta lines: <Unavailable> File [added]: balsara3_2d.par Delta lines: <Unavailable> File [added]: balsara4_2d.par Delta lines: <Unavailable> File [added]: balsara5_2d.par Delta lines: <Unavailable>

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[svn:einsteintoolkit] GRHydro_InitData/trunk/par/ (Rev. 145)
by rhaas＠tapir.caltech.edu 08 Aug '12

08 Aug '12

User: rhaas Date: 2012/08/09 01:26 AM Added: /trunk/par/ balsara1_2d.par, balsara1_2d_low.par Log: GRHydro_InitData: update balsara1_2d par files. From: Bruno Coutinho Mundim <bcmsma(a)astro.rit.edu> File Changes: Directory: /trunk/par/ ====================== File [added]: balsara1_2d.par Delta lines: +384 -0 =================================================================== --- trunk/par/balsara1_2d.par (rev 0) +++ trunk/par/balsara1_2d.par 2012-08-09 06:26:49 UTC (rev 145) @@ -0,0 +1,384 @@ +#============================================================================== +# Balsara magnetized shock tube test #1: GRHydro_InitData +#============================================================================== + +#------------------------------------------------------------------------------ +# Cactus parameters: +#------------------------------------------------------------------------------ +Cactus::cctk_run_title = "Balsara magnetized shock tube test #1 along z=0 plane square diagonal" +Cactus::cctk_full_warnings = "yes" + +#Cactus::terminate = "never" +Cactus::terminate = "time" +Cactus::cctk_final_time = 0.4 +#Cactus::terminate = "iteration" +#Cactus::cctk_itlast = 0 +#Cactus::cctk_itlast = 100 +#Cactus::cctk_itlast = 256 +#Cactus::cctk_itlast = 1024 +#Cactus::terminate="runtime" +#Cactus::max_runtime=28800 # 46 days +#Cactus::max_runtime=1410 # 23.5 hours +#Cactus::max_runtime=1380 # 23 hours +#Cactus::max_runtime=690 # 11.5 hours +#Cactus::max_runtime=450 # 7.5 hours +#Cactus::max_runtime=210 # 3.5 hours + +#------------------------------------------------------------------------------ +# Activate all necessary thorns: +#------------------------------------------------------------------------------ + +ActiveThorns = "Boundary CartGrid3D CoordBase Fortran InitBase IOUtil LocalReduce SymBase Time" +ActiveThorns = "AEILocalInterp LocalInterp" +ActiveThorns = "MoL Slab SpaceMask" +ActiveThorns = "Carpet CarpetInterp CarpetIOASCII CarpetIOHDF5 CarpetIOScalar CarpetLib CarpetIOBasic CarpetReduce CarpetSlab LoopControl" +#ActiveThorns = "Formaline NaNChecker TerminationTrigger TimerReport" +ActiveThorns = "NaNChecker TerminationTrigger TimerReport" +ActiveThorns = "ADMbase ADMcoupling ADMmacros CoordGauge StaticConformal" +ActiveThorns = "Constants TmunuBase HydroBase " +#ActiveThorns = "EOS_Base EOS_IdealFluid EOS_Polytrope" +ActiveThorns = "EOS_Omni" +ActiveThorns = "GRHydro GRHydro_InitData" +ActiveThorns = "HDF5" +ActiveThorns = "SystemStatistics" + +#------------------------------------------------------------------------------ +# Diagnostic parameters: +#------------------------------------------------------------------------------ +Carpet::output_timers_every = 1024 +Carpet::output_timer_tree_every = 256 +Carpet::output_initialise_timer_tree = "yes" +Carpet::storage_verbose = "no" +#Carpet::timers_verbose = "no" +#Carpet::verbose = "yes" # only for Initial Data +Carpet::verbose = "no" +Carpet::veryverbose = "no" +Carpet::grid_structure_filename = "carpet-grid-structure.asc" +Carpet::grid_coordinates_filename = "carpet-grid-coordinates.asc" + +CarpetLib::output_bboxes = "no" +CarpetLib::print_memstats_every = 1024 +CarpetLib::memstat_file = "carpetlib-memory-statistics.asc" +#CarpetLib::print_timestats_every = 1024 +#CarpetLib::timestat_file = "carpetlib-timing-statistics.asc" + +CarpetReduce::verbose = "no" +#CarpetRegrid2::verbose = "yes" +#CarpetRegrid2::veryverbose = "yes" + +#NaNChecker::verbose = "all" + +TimerReport::out_every = 1024 +TimerReport::out_filename = "TimerReport" +#TimerReport::output_all_timers = "yes" +#TimerReport::output_all_timers_together = "yes" +#TimerReport::output_all_timers_readable = "yes" +#TimerReport::before_checkpoint = "yes" +TimerReport::n_top_timers = 40 + +#------------------------------------------------------------------------------ +# Utility parameters: +#------------------------------------------------------------------------------ + +#NaNChecker::check_every = 256 +NaNChecker::check_every = 1 +NaNChecker::check_vars = " + ADMBase::curv + ADMBase::metric + ADMBase::lapse + ADMBase::shift + HydroBase::Bvec + HydroBase::rho + HydroBase::eps + HydroBase::press + HydroBase::vel + HydroBase::w_lorentz +" +NaNChecker::action_if_found = "terminate" +#NaNChecker::action_if_found = "abort" +#NaNChecker::action_if_found = "just warn" #"terminate", "just warn", "abort" +#NaNChecker::check_after=0 + +#TerminationTrigger::max_walltime = 0.0 # hours +TerminationTrigger::max_walltime = 24.0 # hours +TerminationTrigger::on_remaining_walltime = 10.0 # minutes +TerminationTrigger::termination_from_file = "yes" +TerminationTrigger::create_termination_file = "yes" +TerminationTrigger::termination_file = "../TERMINATE" + + +#------------------------------------------------------------------------------ +# Run parameters: +#------------------------------------------------------------------------------ + +#------ +# Grid: +#------ + +#Time::dtfac = 0.8 +Time::dtfac = 0.4 +MoL::ODE_Method = "rk2" +MoL::MoL_Intermediate_Steps = 2 +#MoL::ODE_Method = "rk4" +#MoL::MoL_Intermediate_Steps = 4 +#MoL::MoL_Num_Scratch_Levels = 1 + +CartGrid3D::type = "coordbase" +CartGrid3D::domain = "full" +CartGrid3D::avoid_origin = "no" + +CoordBase::domainsize = "minmax" +CoordBase::spacing = "numcells" # "gridspacing" or "numcells" + +#CoordBase::xmin = -0.035355339059327376220 +#CoordBase::ymin = -0.035355339059327376220 +#CoordBase::zmin = -0.0017677669529663688110 +#CoordBase::xmax = 0.035355339059327376220 +#CoordBase::ymax = 0.035355339059327376220 +#CoordBase::zmax = 0.0017677669529663688110 +#CoordBase::ncells_x = 160 # dx or ncells_x +#CoordBase::ncells_y = 160 # dy or ncells_y +#CoordBase::ncells_z = 8 # dz or ncells_z + +# Approximate memory footprint: 1.3GB x 16 = 20.8GB + +CoordBase::xmin = -0.35355339059327376220 +CoordBase::ymin = -0.35355339059327376220 +CoordBase::zmin = -0.0017677669529663688110 +CoordBase::xmax = 0.35355339059327376220 +CoordBase::ymax = 0.35355339059327376220 +CoordBase::zmax = 0.0017677669529663688110 +CoordBase::ncells_x = 1600 # dx or ncells_x +CoordBase::ncells_y = 1600 # dy or ncells_y +CoordBase::ncells_z = 8 # dz or ncells_z + +Driver::ghost_size = 3 +GRHydro::GRHydro_stencil = 3 + +# General Carpet parameters: +Carpet::domain_from_coordbase = "yes" + +CarpetLib::poison_new_memory = "yes" +CarpetLib::poison_value = 114 + +#------ +# MODEL: +#------ + +HydroBase::initial_hydro = "shocktube" +GRHydro_InitData::shocktube_type = "diagshock2d" +GRHydro_InitData::shock_case = "Balsara1" + +ADMBase::metric_type = "physical" +ADMBase::initial_data = "Cartesian Minkowski" +ADMBase::initial_lapse = "one" +ADMBase::initial_shift = "zero" +ADMBase::initial_dtlapse = "none" +ADMBase::initial_dtshift = "none" + +EOS_Omni::poly_K = 100.0 +EOS_Omni::poly_gamma = 2.0 +EOS_Omni::gl_K = 100.0 +EOS_Omni::gl_gamma = 2.0 +GRHydro::initial_Gamma = 2.0 + +#---------- +# Numerics: +#---------- +#Boundary::radpower = 2 +#HydroBase::timelevels = 3 +HydroBase::timelevels = 2 +#ADMMacros::spatial_order = 4 +SpaceMask::use_mask = "yes" + +#----------- +# Evolution: +#----------- + +HydroBase::evolution_method = "GRHydro" +HydroBase::Bvec_evolution_method = "GRHydro" + +GRHydro::method_type = "RSA FV" +GRHydro::recon_method = "tvd" +#GRHydro::recon_method = "ppm" +#GRHydro::recon_method = "eno" +GRHydro::tvd_limiter = "vanleerMC2" +#GRHydro::tvd_limiter = "minmod" +GRHydro::recon_vars = "primitive" +GRHydro::riemann_solver = "HLLE" +GRHydro::decouple_normal_Bfield = "yes" +#GRHydro::riemann_solver = "LLF" +GRHydro::bound = "none" +GRHydro::GRHydro_eos_type = "General" +GRHydro::GRHydro_eos_table = "Ideal_Fluid" + +GRHydro::Grhydro_MaxNumConstrainedVars = 13 +GRHydro::GRHydro_MaxNumEvolvedVars = 10 + +GRHydro::clean_divergence = "yes" +GRHydro::psidcspeed = "light speed" +GRHydro::kap_dc = 10.0 +GRHydro::track_divB = "yes" +GRHydro::calculate_bcom = "yes" + +#------------------------------------------------------------------------------ +# Output: +#------------------------------------------------------------------------------ + +IO::out_dir = $parfile +IO::out_fileinfo = "none" + +IOBasic::outInfo_every = 1 +IOBasic::outInfo_reductions = "maximum" +IOBasic::outInfo_vars = " + Carpet::physical_time_per_hour + GRHydro::bcom_sq + HydroBase::rho + HydroBase::press + SystemStatistics::maxrss_mb +" + +#IOScalar::outScalar_every = 1024 +#IOScalar::one_file_per_group = "yes" +#IOScalar::outScalar_reductions = "minimum maximum average norm1 norm2" +#IOScalar::outScalar_vars = " +# GRHydro::bcom +# GRHydro::bcom0 +# GRHydro::bcom_sq +# GRHydro::Bcons +# GRHydro::dens +# GrHydro::divB +# GRHydro::scon +# GRHydro::tau +# HydroBase::Bvec +# HydroBase::eps +# HydroBase::press +# HydroBase::rho +# HydroBase::vel +# HydroBase::w_lorentz +# SystemStatistics::process_memory_mb +#" + +IOASCII::one_file_per_group = "yes" +IOASCII::output_symmetry_points = "no" +IOASCII::output_ghost_points = "no" #hg version only! +IOASCII::output_boundary_points = "no" #hg version only! +#IOASCII::out3D_ghosts = "no" #hg (DEPRECATED) +#IOASCII::out3D_outer_ghosts = "no" #hg (DEPRECATED) + +IOASCII::out0D_every = 200 +IOASCII::out0D_vars = " + Carpet::timing +" + +#Set these IOASCII options for initial data only: +#IOASCII::out1D_every = 1 +IOASCII::out1D_every = 2262 +#IOASCII::out1D_dt = 0.01 +IOASCII::out1D_d = "yes" +IOASCII::out1D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GrHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +IOASCII::out2D_every = 2262 +IOASCII::out2D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GrHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +CarpetIOHDF5::one_file_per_group = "yes" +CarpetIOHDF5::open_one_input_file_at_a_time = "yes" + +#CarpetIOHDF5::output_symmetry_points = "no" +#CarpetIOHDF5::output_ghost_points = "no" +#CarpetIOHDF5::output_boundary_points = "no" +#CarpetIOHDF5::output_buffer_points = "no" + +#CarpetIOHDF5::out2D_every = 1 +CarpetIOHDF5::out2D_every = 100 +#CarpetIOHDF5::out2D_dt = 0.01 +CarpetIOHDF5::out2D_xy = "yes" +CarpetIOHDF5::out2D_xz = "no" +CarpetIOHDF5::out2D_yz = "no" +CarpetIOHDF5::out2D_xyplane_z = 0.0 +CarpetIOHDF5::out2D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GRHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +#CarpetIOHDF5::out3D_every = 1 +CarpetIOHDF5::out3D_every = 100 +#CarpetIOHDF5::out3D_dt = 0.01 +CarpetIOHDF5::out3D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::divB + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +#------------------------------------------------------------------------------ +# Analysis: +#------------------------------------------------------------------------------ + + +#------------------------------------------------------------------------------ +# Checkpoint/Recovery: +#------------------------------------------------------------------------------ +#IOHDF5::checkpoint = "yes" +#IO::checkpoint_dir = $parfile +#IO::checkpoint_ID = "yes" +#IO::checkpoint_every = 6144 +##IO::checkpoint_every_walltime_hours = 6.0 +#IO::checkpoint_keep=3 +#IO::checkpoint_on_terminate = "yes" +# +#IO::recover = "autoprobe" +#IO::recover_dir = $parfile + + File [added]: balsara1_2d_low.par Delta lines: +384 -0 =================================================================== --- trunk/par/balsara1_2d_low.par (rev 0) +++ trunk/par/balsara1_2d_low.par 2012-08-09 06:26:49 UTC (rev 145) @@ -0,0 +1,384 @@ +#============================================================================== +# Balsara magnetized shock tube test #1: GRHydro_InitData +#============================================================================== + +#------------------------------------------------------------------------------ +# Cactus parameters: +#------------------------------------------------------------------------------ +Cactus::cctk_run_title = "Balsara magnetized shock tube test #1 along z=0 plane square diagonal" +Cactus::cctk_full_warnings = "yes" + +#Cactus::terminate = "never" +Cactus::terminate = "time" +Cactus::cctk_final_time = 0.4 +#Cactus::terminate = "iteration" +#Cactus::cctk_itlast = 0 +#Cactus::cctk_itlast = 100 +#Cactus::cctk_itlast = 256 +#Cactus::cctk_itlast = 1024 +#Cactus::terminate="runtime" +#Cactus::max_runtime=28800 # 46 days +#Cactus::max_runtime=1410 # 23.5 hours +#Cactus::max_runtime=1380 # 23 hours +#Cactus::max_runtime=690 # 11.5 hours +#Cactus::max_runtime=450 # 7.5 hours +#Cactus::max_runtime=210 # 3.5 hours + +#------------------------------------------------------------------------------ +# Activate all necessary thorns: +#------------------------------------------------------------------------------ + +ActiveThorns = "Boundary CartGrid3D CoordBase Fortran InitBase IOUtil LocalReduce SymBase Time" +ActiveThorns = "AEILocalInterp LocalInterp" +ActiveThorns = "MoL Slab SpaceMask" +ActiveThorns = "Carpet CarpetInterp CarpetIOASCII CarpetIOHDF5 CarpetIOScalar CarpetLib CarpetIOBasic CarpetReduce CarpetSlab LoopControl" +#ActiveThorns = "Formaline NaNChecker TerminationTrigger TimerReport" +ActiveThorns = "NaNChecker TerminationTrigger TimerReport" +ActiveThorns = "ADMbase ADMcoupling ADMmacros CoordGauge StaticConformal" +ActiveThorns = "Constants TmunuBase HydroBase " +#ActiveThorns = "EOS_Base EOS_IdealFluid EOS_Polytrope" +ActiveThorns = "EOS_Omni" +ActiveThorns = "GRHydro GRHydro_InitData" +ActiveThorns = "HDF5" +ActiveThorns = "SystemStatistics" + +#------------------------------------------------------------------------------ +# Diagnostic parameters: +#------------------------------------------------------------------------------ +Carpet::output_timers_every = 1024 +Carpet::output_timer_tree_every = 256 +Carpet::output_initialise_timer_tree = "yes" +Carpet::storage_verbose = "no" +#Carpet::timers_verbose = "no" +#Carpet::verbose = "yes" # only for Initial Data +Carpet::verbose = "no" +Carpet::veryverbose = "no" +Carpet::grid_structure_filename = "carpet-grid-structure.asc" +Carpet::grid_coordinates_filename = "carpet-grid-coordinates.asc" + +CarpetLib::output_bboxes = "no" +CarpetLib::print_memstats_every = 1024 +CarpetLib::memstat_file = "carpetlib-memory-statistics.asc" +#CarpetLib::print_timestats_every = 1024 +#CarpetLib::timestat_file = "carpetlib-timing-statistics.asc" + +CarpetReduce::verbose = "no" +#CarpetRegrid2::verbose = "yes" +#CarpetRegrid2::veryverbose = "yes" + +#NaNChecker::verbose = "all" + +TimerReport::out_every = 1024 +TimerReport::out_filename = "TimerReport" +#TimerReport::output_all_timers = "yes" +#TimerReport::output_all_timers_together = "yes" +#TimerReport::output_all_timers_readable = "yes" +#TimerReport::before_checkpoint = "yes" +TimerReport::n_top_timers = 40 + +#------------------------------------------------------------------------------ +# Utility parameters: +#------------------------------------------------------------------------------ + +#NaNChecker::check_every = 256 +NaNChecker::check_every = 1 +NaNChecker::check_vars = " + ADMBase::curv + ADMBase::metric + ADMBase::lapse + ADMBase::shift + HydroBase::Bvec + HydroBase::rho + HydroBase::eps + HydroBase::press + HydroBase::vel + HydroBase::w_lorentz +" +NaNChecker::action_if_found = "terminate" +#NaNChecker::action_if_found = "abort" +#NaNChecker::action_if_found = "just warn" #"terminate", "just warn", "abort" +#NaNChecker::check_after=0 + +#TerminationTrigger::max_walltime = 0.0 # hours +TerminationTrigger::max_walltime = 24.0 # hours +TerminationTrigger::on_remaining_walltime = 10.0 # minutes +TerminationTrigger::termination_from_file = "yes" +TerminationTrigger::create_termination_file = "yes" +TerminationTrigger::termination_file = "../TERMINATE" + + +#------------------------------------------------------------------------------ +# Run parameters: +#------------------------------------------------------------------------------ + +#------ +# Grid: +#------ + +#Time::dtfac = 0.8 +Time::dtfac = 0.4 +MoL::ODE_Method = "rk2" +MoL::MoL_Intermediate_Steps = 2 +#MoL::ODE_Method = "rk4" +#MoL::MoL_Intermediate_Steps = 4 +#MoL::MoL_Num_Scratch_Levels = 1 + +CartGrid3D::type = "coordbase" +CartGrid3D::domain = "full" +CartGrid3D::avoid_origin = "no" + +CoordBase::domainsize = "minmax" +CoordBase::spacing = "numcells" # "gridspacing" or "numcells" + +#CoordBase::xmin = -0.035355339059327376220 +#CoordBase::ymin = -0.035355339059327376220 +#CoordBase::zmin = -0.0017677669529663688110 +#CoordBase::xmax = 0.035355339059327376220 +#CoordBase::ymax = 0.035355339059327376220 +#CoordBase::zmax = 0.0017677669529663688110 +#CoordBase::ncells_x = 160 # dx or ncells_x +#CoordBase::ncells_y = 160 # dy or ncells_y +#CoordBase::ncells_z = 8 # dz or ncells_z + +# Approximate memory footprint: 650MB x 8 = 5.2GB + +CoordBase::xmin = -0.35355339059327376220 +CoordBase::ymin = -0.35355339059327376220 +CoordBase::zmin = -0.003535533905932737622 +CoordBase::xmax = 0.35355339059327376220 +CoordBase::ymax = 0.35355339059327376220 +CoordBase::zmax = 0.003535533905932737622 +CoordBase::ncells_x = 800 # dx or ncells_x +CoordBase::ncells_y = 800 # dy or ncells_y +CoordBase::ncells_z = 8 # dz or ncells_z + +Driver::ghost_size = 3 +GRHydro::GRHydro_stencil = 3 + +# General Carpet parameters: +Carpet::domain_from_coordbase = "yes" + +CarpetLib::poison_new_memory = "yes" +CarpetLib::poison_value = 114 + +#------ +# MODEL: +#------ + +HydroBase::initial_hydro = "shocktube" +GRHydro_InitData::shocktube_type = "diagshock2d" +GRHydro_InitData::shock_case = "Balsara1" + +ADMBase::metric_type = "physical" +ADMBase::initial_data = "Cartesian Minkowski" +ADMBase::initial_lapse = "one" +ADMBase::initial_shift = "zero" +ADMBase::initial_dtlapse = "none" +ADMBase::initial_dtshift = "none" + +EOS_Omni::poly_K = 100.0 +EOS_Omni::poly_gamma = 2.0 +EOS_Omni::gl_K = 100.0 +EOS_Omni::gl_gamma = 2.0 +GRHydro::initial_Gamma = 2.0 + +#---------- +# Numerics: +#---------- +#Boundary::radpower = 2 +#HydroBase::timelevels = 3 +HydroBase::timelevels = 2 +#ADMMacros::spatial_order = 4 +SpaceMask::use_mask = "yes" + +#----------- +# Evolution: +#----------- + +HydroBase::evolution_method = "GRHydro" +HydroBase::Bvec_evolution_method = "GRHydro" + +GRHydro::method_type = "RSA FV" +GRHydro::recon_method = "tvd" +#GRHydro::recon_method = "ppm" +#GRHydro::recon_method = "eno" +GRHydro::tvd_limiter = "vanleerMC2" +#GRHydro::tvd_limiter = "minmod" +GRHydro::recon_vars = "primitive" +GRHydro::riemann_solver = "HLLE" +GRHydro::decouple_normal_Bfield = "yes" +#GRHydro::riemann_solver = "LLF" +GRHydro::bound = "none" +GRHydro::GRHydro_eos_type = "General" +GRHydro::GRHydro_eos_table = "Ideal_Fluid" + +GRHydro::Grhydro_MaxNumConstrainedVars = 13 +GRHydro::GRHydro_MaxNumEvolvedVars = 10 + +GRHydro::clean_divergence = "yes" +GRHydro::psidcspeed = "light speed" +GRHydro::kap_dc = 10.0 +GRHydro::track_divB = "yes" +GRHydro::calculate_bcom = "yes" + +#------------------------------------------------------------------------------ +# Output: +#------------------------------------------------------------------------------ + +IO::out_dir = $parfile +IO::out_fileinfo = "none" + +IOBasic::outInfo_every = 1 +IOBasic::outInfo_reductions = "maximum" +IOBasic::outInfo_vars = " + Carpet::physical_time_per_hour + GRHydro::bcom_sq + HydroBase::rho + HydroBase::press + SystemStatistics::maxrss_mb +" + +#IOScalar::outScalar_every = 1024 +#IOScalar::one_file_per_group = "yes" +#IOScalar::outScalar_reductions = "minimum maximum average norm1 norm2" +#IOScalar::outScalar_vars = " +# GRHydro::bcom +# GRHydro::bcom0 +# GRHydro::bcom_sq +# GRHydro::Bcons +# GRHydro::dens +# GrHydro::divB +# GRHydro::scon +# GRHydro::tau +# HydroBase::Bvec +# HydroBase::eps +# HydroBase::press +# HydroBase::rho +# HydroBase::vel +# HydroBase::w_lorentz +# SystemStatistics::process_memory_mb +#" + +IOASCII::one_file_per_group = "yes" +IOASCII::output_symmetry_points = "no" +IOASCII::output_ghost_points = "no" #hg version only! +IOASCII::output_boundary_points = "no" #hg version only! +#IOASCII::out3D_ghosts = "no" #hg (DEPRECATED) +#IOASCII::out3D_outer_ghosts = "no" #hg (DEPRECATED) + +IOASCII::out0D_every = 200 +IOASCII::out0D_vars = " + Carpet::timing +" + +#Set these IOASCII options for initial data only: +#IOASCII::out1D_every = 1 +IOASCII::out1D_every = 1131 +#IOASCII::out1D_dt = 0.01 +IOASCII::out1D_d = "yes" +IOASCII::out1D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GrHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +IOASCII::out2D_every = 1131 +IOASCII::out2D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GrHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +CarpetIOHDF5::one_file_per_group = "yes" +CarpetIOHDF5::open_one_input_file_at_a_time = "yes" + +#CarpetIOHDF5::output_symmetry_points = "no" +#CarpetIOHDF5::output_ghost_points = "no" +#CarpetIOHDF5::output_boundary_points = "no" +#CarpetIOHDF5::output_buffer_points = "no" + +#CarpetIOHDF5::out2D_every = 1 +CarpetIOHDF5::out2D_every = 100 +#CarpetIOHDF5::out2D_dt = 0.01 +CarpetIOHDF5::out2D_xy = "yes" +CarpetIOHDF5::out2D_xz = "no" +CarpetIOHDF5::out2D_yz = "no" +CarpetIOHDF5::out2D_xyplane_z = 0.0 +CarpetIOHDF5::out2D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::Bcons + GRHydro::dens + GRHydro::divB + GrHydro::psidc + GRHydro::scon + GRHydro::tau + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +#CarpetIOHDF5::out3D_every = 1 +CarpetIOHDF5::out3D_every = 100 +#CarpetIOHDF5::out3D_dt = 0.01 +CarpetIOHDF5::out3D_vars = " + GRHydro::bcom + GRHydro::bcom0 + GRHydro::bcom_sq + GRHydro::divB + HydroBase::Bvec + HydroBase::eps + HydroBase::press + HydroBase::rho + HydroBase::vel + HydroBase::w_lorentz +" + +#------------------------------------------------------------------------------ +# Analysis: +#------------------------------------------------------------------------------ + + +#------------------------------------------------------------------------------ +# Checkpoint/Recovery: +#------------------------------------------------------------------------------ +#IOHDF5::checkpoint = "yes" +#IO::checkpoint_dir = $parfile +#IO::checkpoint_ID = "yes" +#IO::checkpoint_every = 6144 +##IO::checkpoint_every_walltime_hours = 6.0 +#IO::checkpoint_keep=3 +#IO::checkpoint_on_terminate = "yes" +# +#IO::recover = "autoprobe" +#IO::recover_dir = $parfile + +

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Commits August 2012