Commits September 2012

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[Carpet] branch, master, updated. carpet-6-init-14-g57e5126
by Carpet git repositories 27 Sep '12

27 Sep '12

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "Carpet — Adaptive Mesh Refinement for the Cactus Framework <http://carpetcode.org/>". The branch, master has been updated via 57e512682d7dd8fd5e2b5b084ecbb1076a5bea12 (commit) from cec4ff4e2c8765d8a671f9355f68a3fb755517e4 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- commit 57e512682d7dd8fd5e2b5b084ecbb1076a5bea12 Author: Erik Schnetter <schnetter(a)gmail.com> Date: Thu Sep 27 22:28:50 2012 -0400 Carpet: Correct errors with adaptive time stepping ----------------------------------------------------------------------- Summary of changes: Carpet/Carpet/src/Cycle.cc | 4 +++- Carpet/Carpet/src/modes.cc | 10 ++++++++-- 2 files changed, 11 insertions(+), 3 deletions(-) hooks/post-receive -- Carpet — Adaptive Mesh Refinement for the Cactus Framework <http://carpetcode.org/>

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[McLachlan]McLachlan branch, master, updated. 7301877639925c3c1f869f32cf0d55e1a5bc65f5
by Carpet git repositories 27 Sep '12

27 Sep '12

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "McLachlan". The branch, master has been updated via 7301877639925c3c1f869f32cf0d55e1a5bc65f5 (commit) from 118d8e3e2df1cad73854a7ec57ea7ef06ca2bcc7 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- commit 7301877639925c3c1f869f32cf0d55e1a5bc65f5 Author: Erik Schnetter <schnetter(a)gmail.com> Date: Thu Sep 27 22:27:13 2012 -0400 Add test cases for MoL/Carpet with adaptive time stepping ----------------------------------------------------------------------- Summary of changes: ML_WaveToy_Test/interface.ccl | 1 + {ML_BSSN_Test => ML_WaveToy_Test}/param.ccl | 0 {ML_BSSN_Test => ML_WaveToy_Test}/schedule.ccl | 0 .../src/make.code.defn | 0 ML_WaveToy_Test/test/gaussian-RK4.par | 77 ++ ML_WaveToy_Test/test/gaussian-RK4/eps.d.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/eps.x.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/eps.y.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/eps.z.asc | 662 +++++++++++ ML_WaveToy_Test/test/gaussian-RK4/gaussian-RK4.par | 77 ++ ML_WaveToy_Test/test/gaussian-RK4/rho.d.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/rho.x.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/rho.y.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/rho.z.asc | 662 +++++++++++ ML_WaveToy_Test/test/gaussian-RK4/u.d.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/u.maximum.asc | 13 + ML_WaveToy_Test/test/gaussian-RK4/u.minimum.asc | 13 + ML_WaveToy_Test/test/gaussian-RK4/u.norm1.asc | 13 + ML_WaveToy_Test/test/gaussian-RK4/u.norm2.asc | 13 + ML_WaveToy_Test/test/gaussian-RK4/u.norm_inf.asc | 13 + ML_WaveToy_Test/test/gaussian-RK4/u.x.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/u.y.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK4/u.z.asc | 662 +++++++++++ ML_WaveToy_Test/test/gaussian-RK45-adaptive.par | 80 ++ .../test/gaussian-RK45-adaptive/eps.d.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/eps.x.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/eps.y.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/eps.z.asc | 662 +++++++++++ .../gaussian-RK45-adaptive.par | 80 ++ .../test/gaussian-RK45-adaptive/rho.d.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/rho.x.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/rho.y.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/rho.z.asc | 662 +++++++++++ .../test/gaussian-RK45-adaptive/u.d.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/u.maximum.asc | 13 + .../test/gaussian-RK45-adaptive/u.minimum.asc | 13 + .../test/gaussian-RK45-adaptive/u.norm1.asc | 13 + .../test/gaussian-RK45-adaptive/u.norm2.asc | 13 + .../test/gaussian-RK45-adaptive/u.norm_inf.asc | 13 + .../test/gaussian-RK45-adaptive/u.x.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/u.y.asc | 1201 ++++++++++++++++++++ .../test/gaussian-RK45-adaptive/u.z.asc | 662 +++++++++++ ML_WaveToy_Test/test/gaussian-RK45.par | 78 ++ ML_WaveToy_Test/test/gaussian-RK45/eps.d.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/eps.x.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/eps.y.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/eps.z.asc | 662 +++++++++++ .../test/gaussian-RK45/gaussian-RK45.par | 78 ++ ML_WaveToy_Test/test/gaussian-RK45/rho.d.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/rho.x.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/rho.y.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/rho.z.asc | 662 +++++++++++ ML_WaveToy_Test/test/gaussian-RK45/u.d.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/u.maximum.asc | 13 + ML_WaveToy_Test/test/gaussian-RK45/u.minimum.asc | 13 + ML_WaveToy_Test/test/gaussian-RK45/u.norm1.asc | 13 + ML_WaveToy_Test/test/gaussian-RK45/u.norm2.asc | 13 + ML_WaveToy_Test/test/gaussian-RK45/u.norm_inf.asc | 13 + ML_WaveToy_Test/test/gaussian-RK45/u.x.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/u.y.asc | 1201 ++++++++++++++++++++ ML_WaveToy_Test/test/gaussian-RK45/u.z.asc | 662 +++++++++++ {ML_CCZ4_Test => ML_WaveToy_Test}/test/test.ccl | 0 62 files changed, 39051 insertions(+), 0 deletions(-) create mode 100644 ML_WaveToy_Test/interface.ccl copy {ML_BSSN_Test => ML_WaveToy_Test}/param.ccl (100%) copy {ML_BSSN_Test => ML_WaveToy_Test}/schedule.ccl (100%) copy {ML_BSSN_Test => ML_WaveToy_Test}/src/make.code.defn (100%) create mode 100644 ML_WaveToy_Test/test/gaussian-RK4.par create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/eps.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/eps.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/eps.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/eps.z.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/gaussian-RK4.par create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/rho.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/rho.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/rho.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/rho.z.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.maximum.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.minimum.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.norm1.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.norm2.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.norm_inf.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK4/u.z.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive.par create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/eps.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/eps.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/eps.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/eps.z.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/gaussian-RK45-adaptive.par create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/rho.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/rho.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/rho.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/rho.z.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.maximum.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.minimum.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.norm1.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.norm2.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.norm_inf.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45-adaptive/u.z.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45.par create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/eps.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/eps.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/eps.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/eps.z.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/gaussian-RK45.par create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/rho.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/rho.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/rho.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/rho.z.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.d.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.maximum.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.minimum.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.norm1.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.norm2.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.norm_inf.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.x.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.y.asc create mode 100644 ML_WaveToy_Test/test/gaussian-RK45/u.z.asc copy {ML_CCZ4_Test => ML_WaveToy_Test}/test/test.ccl (100%) hooks/post-receive -- McLachlan

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[svn:einsteintoolkit] www/about/members/ (Rev. 879)
by knarf＠cct.lsu.edu 26 Sep '12

26 Sep '12

User: knarf Date: 2012/09/26 09:47 AM Modified: /about/members/ members.txt Log: update member list File Changes: Directory: /about/members/ ========================== File [modified]: members.txt Delta lines: +4 -3 =================================================================== --- about/members/members.txt 2012-09-20 13:43:05 UTC (rev 878) +++ about/members/members.txt 2012-09-26 14:47:12 UTC (rev 879) @@ -54,15 +54,12 @@ http://www.cct.lsu.edu/numerical/ Louisiana State University Ernazar Abdikamalov - http://www.cct.lsu.edu/~gallen Gabrielle Allen http://www.cct.lsu.edu/~sbrandt/ Steven Brandt Dennis Castleberry Peter Diener Joshua Harris - Colby Jordan Hari Krishnan Frank LÃ¶ffler - Edward Seidel Jian Tao http://www.mcneese.edu/ McNeese State University @@ -118,6 +115,10 @@ http://www.sissa.it/main/ SISSA - International School for Advanced Studies Wolfgang Kastaun +http://skolkovotech.ru/ Skolkovo Institute of Science and Technology + http://www.cct.lsu.edu/~gallen Gabrielle Allen + Edward Seidel + http://www.uib.es/ Universitat de les Illes Balears Sascha Husa

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[Carpet] branch, master, updated. carpet-6-init-13-gcec4ff4
by Carpet git repositories 26 Sep '12

26 Sep '12

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "Carpet — Adaptive Mesh Refinement for the Cactus Framework <http://carpetcode.org/>". The branch, master has been updated via cec4ff4e2c8765d8a671f9355f68a3fb755517e4 (commit) from f06c356c722dbf27cd1077dafe51519ba431e99b (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- commit cec4ff4e2c8765d8a671f9355f68a3fb755517e4 Author: Christian Reisswig <reisswig(a)scriwalker.(none)> Date: Wed Sep 26 05:04:00 2012 -0700 Introduce parameter "additional_overlap_zones" to control the amount of additional (user-requested) overlap zones. This is similar to additional_buffer_zones. Also fixed a bug in reporting the number of overlap zones in stdout. ("buffers" instead of "overlaps") was used. ----------------------------------------------------------------------- Summary of changes: Carpet/Carpet/param.ccl | 5 +++++ Carpet/Carpet/src/SetupGH.cc | 6 +++--- 2 files changed, 8 insertions(+), 3 deletions(-) hooks/post-receive -- Carpet — Adaptive Mesh Refinement for the Cactus Framework <http://carpetcode.org/>

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 190)
by rhaas＠tapir.caltech.edu 25 Sep '12

25 Sep '12

User: rhaas Date: 2012/09/25 05:20 PM Modified: /trunk/ einsteintoolkit.bib Log: add Balsara & Spicer JCompPhys 140 270 I could find no SPIRES entry for this so made up my own key File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.bib Delta lines: +13 -0 =================================================================== --- trunk/einsteintoolkit.bib 2012-09-14 16:13:26 UTC (rev 189) +++ trunk/einsteintoolkit.bib 2012-09-25 22:20:50 UTC (rev 190) @@ -526,6 +526,19 @@ SLACcitation = "%%CITATION = 0708.4202;%%" } +@article{Balsara:1999aa, + author = {{Balsara}, D.~S. and {Spicer}, D.~S.}, + title = "{A Staggered Mesh Algorithm Using High Order Godunov Fluxes to Ensure Solenoidal Magnetic Fields in Magnetohydrodynamic Simulations}", + journal = {Journal of Computational Physics}, + year = 1999, + month = mar, + volume = 149, + pages = {270-292}, + doi = {10.1006/jcph.1998.6153}, + adsurl = {http://adsabs.harvard.edu/abs/1999JCoPh.149..270B}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + @article{Banyuls:1997zz, author = "Banyuls, Francesc and Font, Jose A. and Ibanez, Jose M.A. and Marti, Jose M.A. and Miralles, Juan A.",

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[McLachlan]McLachlan branch, dgfe, updated. 5fba36dc49ce4d6f22c1c5f803c292f2728a66dd
by Carpet git repositories 25 Sep '12

25 Sep '12

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[svn:einsteintoolkit] www/about/members/ (Rev. 878)
by knarf＠cct.lsu.edu 20 Sep '12

20 Sep '12

User: knarf Date: 2012/09/20 08:43 AM Modified: /about/members/ members.txt Log: add Francesco Pannarale File Changes: Directory: /about/members/ ========================== File [modified]: members.txt Delta lines: +1 -0 =================================================================== --- about/members/members.txt 2012-09-14 15:52:44 UTC (rev 877) +++ about/members/members.txt 2012-09-20 13:43:05 UTC (rev 878) @@ -7,6 +7,7 @@ Seth Hopper Michael Koppitz Gian Mario Manca + Francesco Pannarale David Radice Luciano Rezzolla Aaryn Tonita

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[svn:einsteintoolkit] Hydro_InitExcision/trunk/test/ (Rev. 126)
by rhaas＠tapir.caltech.edu 19 Sep '12

19 Sep '12

User: rhaas Date: 2012/09/19 03:15 PM Modified: /trunk/test/ halfsphere_pugh_ppm.par Log: remove 3d output from halfsphere_pugh_ppm this was accidentally committed in r 124 and causes about 0.5GB of data to be output. Thanks to Ian Hinder for pointing this out. File Changes: Directory: /trunk/test/ ======================= File [modified]: halfsphere_pugh_ppm.par Delta lines: +0 -4 =================================================================== --- trunk/test/halfsphere_pugh_ppm.par 2012-07-06 20:20:05 UTC (rev 125) +++ trunk/test/halfsphere_pugh_ppm.par 2012-09-19 20:15:46 UTC (rev 126) @@ -46,10 +46,6 @@ IOASCII::out2D_vars = "hydrobase::rho" #IOASCII::out2D_vars = "hydrobase::rho hydrobase::press hydrobase::eps hydrobase::vel GRHydro::dens GRHydro::tau GRHydro::scon HydroBase::w_lorentz" -IOASCII::out3D_every = 1 -IOASCII::out3D_vars = "hydrobase::vel[1]" -ioascii::out_format = ".15e" - ActiveThorns = "nanchecker mol" MoL::ode_method = "rk2"

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[Carpet] branch, master, updated. carpet-6-init-12-gf06c356
by Carpet git repositories 18 Sep '12

18 Sep '12

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "Carpet — Adaptive Mesh Refinement for the Cactus Framework <http://carpetcode.org/>". The branch, master has been updated via f06c356c722dbf27cd1077dafe51519ba431e99b (commit) from 45872e1f5483cb9b556de7db9a689f16f59ba737 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- commit f06c356c722dbf27cd1077dafe51519ba431e99b Author: Erik Schnetter <schnetter(a)gmail.com> Date: Tue Sep 18 16:28:37 2012 -0400 CarpetLib: Clean up backtrace generation Also add test parameter file. ----------------------------------------------------------------------- Summary of changes: Carpet/CarpetLib/param.ccl | 6 +++++ Carpet/CarpetLib/schedule.ccl | 7 +++++ Carpet/CarpetLib/src/backtrace.cc | 42 +++++++++++++++++++++++++++------- Carpet/CarpetLib/src/backtrace.hh | 2 +- Carpet/CarpetLib/test/backtrace.par | 10 ++++++++ 5 files changed, 57 insertions(+), 10 deletions(-) create mode 100644 Carpet/CarpetLib/test/backtrace.par hooks/post-receive -- Carpet — Adaptive Mesh Refinement for the Cactus Framework <http://carpetcode.org/>

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[Carpet] branch, master, updated. carpet-6-init-11-g45872e1
by Carpet git repositories 18 Sep '12

18 Sep '12

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "Carpet — Adaptive Mesh Refinement for the Cactus Framework <http://carpetcode.org/>". The branch, master has been updated via 45872e1f5483cb9b556de7db9a689f16f59ba737 (commit) from b57036c3544ed617bdf44737b2503cf3abc6ec37 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- commit 45872e1f5483cb9b556de7db9a689f16f59ba737 Author: Erik Schnetter <schnetter(a)gmail.com> Date: Tue Sep 18 12:16:42 2012 -0400 Carpet: Remove outdated backtrace function declarations ----------------------------------------------------------------------- Summary of changes: Carpet/Carpet/src/Initialise.cc | 3 --- 1 files changed, 0 insertions(+), 3 deletions(-) hooks/post-receive -- Carpet — Adaptive Mesh Refinement for the Cactus Framework <http://carpetcode.org/>

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Commits September 2012