Commits March 2014

commits@lists.einsteintoolkit.org

8 participants
172 discussions

[svn:einsteintoolkit] www/documentation/ThornDoc/ (Rev. 1149)
by barry.wardell＠gmail.com 14 Mar '14

14 Mar '14

User: barry.wardell Date: 2014/03/14 01:04 PM Modified: /documentation/ThornDoc/ docpage.php Log: Include arrangement documentation in single html page version File Changes: Directory: /documentation/ThornDoc/ =================================== File [modified]: docpage.php Delta lines: +2 -1 =================================================================== --- documentation/ThornDoc/docpage.php 2014-03-14 16:01:55 UTC (rev 1148) +++ documentation/ThornDoc/docpage.php 2014-03-14 18:04:12 UTC (rev 1149) @@ -13,7 +13,8 @@ } if($page == "All/documentation.html") { - $pages = array_merge(glob('*/documentation/html'), glob('*/*/documentation.html')); + $pages = array_merge(glob('*/documentation.html'), glob('*/*/documentation.html')); + sort($pages); $title='Thorn and Arrangement Documentation'; include_once($_SERVER['DOCUMENT_ROOT'].'/global/header.php'); echo '<link rel="stylesheet" type="text/css" href="/global/documentation.css">';

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[svn:einsteintoolkit] incoming/TestMoL/test/ (Rev. 122)
by rhaas＠tapir.caltech.edu 14 Mar '14

14 Mar '14

User: rhaas Date: 2014/03/14 11:05 AM Added: /TestMoL/test/ test.ccl Log: TestMoL: restrict tests to 2 procs since CactusASCII's output for grid arrays (when using PUGH) is number of process dependent File Changes: Directory: /TestMoL/test/ ========================= File [added]: test.ccl Delta lines: +1 -0 =================================================================== --- TestMoL/test/test.ccl (rev 0) +++ TestMoL/test/test.ccl 2014-03-14 16:05:18 UTC (rev 122) @@ -0,0 +1 @@ +NPROCS 2

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[svn:einsteintoolkit] incoming/TestMoL/doc/ (Rev. 121)
by rhaas＠tapir.caltech.edu 14 Mar '14

14 Mar '14

User: rhaas Date: 2014/03/14 11:04 AM Modified: /TestMoL/doc/ documentation.tex Log: TestMoL: fix typos in documentation File Changes: Directory: /TestMoL/doc/ ======================== File [modified]: documentation.tex Delta lines: +1 -1 =================================================================== --- TestMoL/doc/documentation.tex 2014-03-14 15:54:53 UTC (rev 120) +++ TestMoL/doc/documentation.tex 2014-03-14 16:04:25 UTC (rev 121) @@ -100,7 +100,7 @@ % Add an abstract for this thorn's documentation \begin{abstract} This thorn provides tests (partially correctness tests) for \texttt{MoL}. -It integrates a know function in time choosing for each ODE method a +It integrates a known function in time choosing for each ODE method a polynomial in time that can be exactly integrated by the method. \end{abstract}

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[svn:einsteintoolkit] www/global/ (Rev. 1148)
by barry.wardell＠gmail.com 14 Mar '14

14 Mar '14

User: barry.wardell Date: 2014/03/14 11:01 AM Modified: /global/ navigation.php Log: Update link to thorn guide to point to new ThornDoc documentation File Changes: Directory: /global/ =================== File [modified]: navigation.php Delta lines: +1 -1 =================================================================== --- global/navigation.php 2014-03-14 15:56:24 UTC (rev 1147) +++ global/navigation.php 2014-03-14 16:01:55 UTC (rev 1148) @@ -31,7 +31,7 @@ <li><a href="http://docs.einsteintoolkit.org/et-docs/Tutorial_for_New_Users">Tutorial for New Users</a></li> <li><a href="/documentation/licenses">Citing</a> <li><a href="/documentation/UsersGuide/UsersGuide.html">User's Guide</a></li> - <li><a href="/documentation/ThornGuide/ThornGuide.html">Thorn Guide</a></li> + <li><a href="/documentation/ThornDoc/">Thorn Guide</a></li> <li><a href="/documentation/ReferenceManual/ReferenceManual.html">Reference Manual</a></li> <li><a href="/documentation/MaintGuide/MaintGuide.html">Maintenance Guide</a></li> <li><a href="/documentation/contribute/">How to Contribute</a></li>

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[svn:einsteintoolkit] www/documentation/ThornDoc/ (Rev. 1147)
by barry.wardell＠gmail.com 14 Mar '14

14 Mar '14

User: barry.wardell Date: 2014/03/14 10:56 AM Modified: /documentation/ThornDoc/ docpage.php, index.php Log: Include table of contents in single thorn documentation page File Changes: Directory: /documentation/ThornDoc/ =================================== File [modified]: docpage.php Delta lines: +14 -2 =================================================================== --- documentation/ThornDoc/docpage.php 2014-03-14 15:15:32 UTC (rev 1146) +++ documentation/ThornDoc/docpage.php 2014-03-14 15:56:24 UTC (rev 1147) @@ -2,20 +2,32 @@ $page = $_GET['page']."/documentation.html"; function get_page_contents ($filename) { + $page = dirname($filename); + echo '<a name="'.$page.'">'; echo '<div style="thorndoc">'; $contents = file_get_contents($filename); preg_match('/.*<body[^>]*>(.*)<\/body>.*/sm', $contents, $body); - echo preg_replace('/src="documentation([a-z0-9]*)/', 'src="/documentation/ThornDoc/'.dirname($filename).'/documentation$1', $body[1]); + echo preg_replace('/src="documentation([a-z0-9]*)/', 'src="/documentation/ThornDoc/'.$page.'/documentation$1', $body[1]); echo '</div>'; - echo '<hr />'; + echo '</a>'; } if($page == "All/documentation.html") { $pages = array_merge(glob('*/documentation/html'), glob('*/*/documentation.html')); + $title='Thorn and Arrangement Documentation'; include_once($_SERVER['DOCUMENT_ROOT'].'/global/header.php'); echo '<link rel="stylesheet" type="text/css" href="/global/documentation.css">'; + echo '<h2>Table of Contents</h2>'; + echo '<ul>'; foreach ($pages as $thornpage){ + $page = dirname($thornpage); + echo '<li><a href="#'.$page.'">'.$page.'</a></li>'; + } + echo '</ul>'; + + foreach ($pages as $thornpage){ get_page_contents($thornpage); + echo '<hr />'; } include_once($_SERVER['DOCUMENT_ROOT'].'/global/footer.php'); } elseif (! file_exists($page)) { File [modified]: index.php Delta lines: +1 -1 =================================================================== --- documentation/ThornDoc/index.php 2014-03-14 15:15:32 UTC (rev 1146) +++ documentation/ThornDoc/index.php 2014-03-14 15:56:24 UTC (rev 1147) @@ -1,4 +1,4 @@ -<?php $title='Documentation'; +<?php $title='Thorn and Arrangement Documentation'; include_once($_SERVER['DOCUMENT_ROOT'].'/global/header.php'); ?> <!--

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[svn:einsteintoolkit] incoming/TestMoL/src/ (Rev. 120)
by rhaas＠tapir.caltech.edu 14 Mar '14

14 Mar '14

User: rhaas Date: 2014/03/14 10:54 AM Modified: /TestMoL/src/ Init.c, RHS.c, Register.c Log: remove unused includes, clean up comments, check all return values File Changes: Directory: /TestMoL/src/ ======================== File [modified]: Init.c Delta lines: +0 -2 =================================================================== --- TestMoL/src/Init.c 2014-03-13 23:20:40 UTC (rev 119) +++ TestMoL/src/Init.c 2014-03-14 15:54:53 UTC (rev 120) @@ -1,8 +1,6 @@ #include "cctk.h" #include "cctk_Parameters.h" #include "cctk_Arguments.h" -#include "cctk_Functions.h" -#include "cctk_Loop.h" #include <assert.h> File [modified]: RHS.c Delta lines: +0 -2 =================================================================== --- TestMoL/src/RHS.c 2014-03-13 23:20:40 UTC (rev 119) +++ TestMoL/src/RHS.c 2014-03-14 15:54:53 UTC (rev 120) @@ -1,8 +1,6 @@ #include "cctk.h" #include "cctk_Parameters.h" #include "cctk_Arguments.h" -#include "cctk_Functions.h" -#include "cctk_Loop.h" #include <assert.h> #include <math.h> File [modified]: Register.c Delta lines: +20 -9 =================================================================== --- TestMoL/src/Register.c 2014-03-13 23:20:40 UTC (rev 119) +++ TestMoL/src/Register.c 2014-03-14 15:54:53 UTC (rev 120) @@ -1,7 +1,6 @@ #include "cctk.h" #include "cctk_Parameters.h" #include "cctk_Arguments.h" -#include "cctk_Functions.h" #include <assert.h> @@ -25,10 +24,17 @@ CCTK_GroupIndex(CCTK_THORNSTRING "::constrained_gf"); const int sandr_gf_group = CCTK_GroupIndex(CCTK_THORNSTRING "::sandr_gf"); - MoLRegisterEvolvedGroupSlow(evolvedslow_gf_group, rhsslow_gf_group); - MoLRegisterEvolvedGroup(evolved_gf_group, rhs_gf_group); - MoLRegisterConstrainedGroup(constrained_gf_group); - MoLRegisterSaveAndRestoreGroup(sandr_gf_group); + const int ierr_evolved_gf_slow = + MoLRegisterEvolvedGroupSlow(evolvedslow_gf_group, rhsslow_gf_group); + const int ierr_evolved_gf = + MoLRegisterEvolvedGroup(evolved_gf_group, rhs_gf_group); + const int ierr_constrained_gf = + MoLRegisterConstrainedGroup(constrained_gf_group); + const int ierr_saveandrestore_gf = + MoLRegisterSaveAndRestoreGroup(sandr_gf_group); + + assert(!ierr_evolved_gf_slow && !ierr_evolved_gf && !ierr_constrained_gf && + !ierr_saveandrestore_gf); } if(evolve_grid_array) @@ -40,11 +46,16 @@ CCTK_GroupIndex(CCTK_THORNSTRING "::constrained_ga"); const int sandr_ga_group = CCTK_GroupIndex(CCTK_THORNSTRING "::sandr_ga"); - MoLRegisterEvolvedGroup(evolved_ga_group, rhs_ga_group); - MoLRegisterConstrainedGroup(constrained_ga_group); - MoLRegisterSaveAndRestoreGroup(sandr_ga_group); + const int ierr_evolved_ga = + MoLRegisterEvolvedGroup(evolved_ga_group, rhs_ga_group); + const int ierr_constrained_ga = + MoLRegisterConstrainedGroup(constrained_ga_group); + const int ierr_saveandrestore_ga = + MoLRegisterSaveAndRestoreGroup(sandr_ga_group); + + assert(!ierr_evolved_ga && !ierr_constrained_ga && !ierr_saveandrestore_ga); } - // TODO: add code to test chaning if variable types + // TODO: add code to test changing of variable types // TODO: add code to test upgrades from sandr -> constrained -> evolved }

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[McLachlan]McLachlan branch, dgfe2, updated. 8589aadd7f633da42a94a920e8bc5011fac14c96
by Carpet git repositories 14 Mar '14

14 Mar '14

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "McLachlan". The branch, dgfe2 has been updated via 8589aadd7f633da42a94a920e8bc5011fac14c96 (commit) via 311191cf5cd5f41c3e9a254fba8535bfa46f8d8d (commit) via dc41f61a6d82acd4b7a2d5a115725f45cba598e4 (commit) from 32780bde2267659d628b0349fc4e70ec32b9b566 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- commit 8589aadd7f633da42a94a920e8bc5011fac14c96 Author: Erik Schnetter <schnetter(a)gmail.com> Date: Fri Mar 14 11:47:02 2014 -0400 Regenerate thorns commit 311191cf5cd5f41c3e9a254fba8535bfa46f8d8d Author: Erik Schnetter <schnetter(a)gmail.com> Date: Fri Mar 14 11:46:42 2014 -0400 Add empty lines before files that are appended while merging commit dc41f61a6d82acd4b7a2d5a115725f45cba598e4 Author: Erik Schnetter <schnetter(a)gmail.com> Date: Fri Mar 14 11:46:14 2014 -0400 Rename derivative operator functions ----------------------------------------------------------------------- Summary of changes: ML_Test_DG4/interface.ccl | 3 +++ ML_Test_DG4/schedule.ccl | 3 +++ ML_Test_DG4/src/make.code.defn | 3 +++ ML_Test_FD4/interface.ccl | 3 +++ ML_Test_FD4/schedule.ccl | 3 +++ ML_Test_FD4/src/make.code.defn | 3 +++ ML_WaveToy_DG4/interface.ccl | 3 +++ ML_WaveToy_DG4/schedule.ccl | 3 +++ ML_WaveToy_DG4/src/make.code.defn | 3 +++ ML_WaveToy_DG8/interface.ccl | 3 +++ ML_WaveToy_DG8/schedule.ccl | 3 +++ ML_WaveToy_DG8/src/make.code.defn | 3 +++ ML_WaveToy_FD4/interface.ccl | 3 +++ ML_WaveToy_FD4/schedule.ccl | 3 +++ ML_WaveToy_FD4/src/make.code.defn | 3 +++ ML_WaveToy_FD8/interface.ccl | 3 +++ ML_WaveToy_FD8/schedule.ccl | 3 +++ ML_WaveToy_FD8/src/make.code.defn | 3 +++ m/DGops.m | 6 +++--- m/FDops.m | 10 +++++----- m/Test.m | 2 ++ m/Test.merge/interface.ccl | 3 +++ m/Test.merge/schedule.ccl | 3 +++ m/Test.merge/src/make.code.defn | 3 +++ m/WaveToy.m | 2 ++ m/WaveToy.merge/interface.ccl | 3 +++ m/WaveToy.merge/schedule.ccl | 3 +++ m/WaveToy.merge/src/make.code.defn | 3 +++ 28 files changed, 84 insertions(+), 8 deletions(-) hooks/post-receive -- McLachlan

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[svn:einsteintoolkit] www/documentation/ThornDoc/ (Rev. 1146)
by barry.wardell＠gmail.com 14 Mar '14

14 Mar '14

User: barry.wardell Date: 2014/03/14 10:15 AM Modified: /documentation/ThornDoc/ docpage.php, index.php Log: Add support for showing thorn documentation as a single HTML file File Changes: Directory: /documentation/ThornDoc/ =================================== File [modified]: docpage.php Delta lines: +23 -10 =================================================================== --- documentation/ThornDoc/docpage.php 2014-03-14 14:47:32 UTC (rev 1145) +++ documentation/ThornDoc/docpage.php 2014-03-14 15:15:32 UTC (rev 1146) @@ -1,7 +1,24 @@ <?php $page = $_GET['page']."/documentation.html"; -if(! file_exists($page)) { +function get_page_contents ($filename) { + echo '<div style="thorndoc">'; + $contents = file_get_contents($filename); + preg_match('/.*<body[^>]*>(.*)<\/body>.*/sm', $contents, $body); + echo preg_replace('/src="documentation([a-z0-9]*)/', 'src="/documentation/ThornDoc/'.dirname($filename).'/documentation$1', $body[1]); + echo '</div>'; + echo '<hr />'; +} + +if($page == "All/documentation.html") { + $pages = array_merge(glob('*/documentation/html'), glob('*/*/documentation.html')); + include_once($_SERVER['DOCUMENT_ROOT'].'/global/header.php'); + echo '<link rel="stylesheet" type="text/css" href="/global/documentation.css">'; + foreach ($pages as $thornpage){ + get_page_contents($thornpage); + } + include_once($_SERVER['DOCUMENT_ROOT'].'/global/footer.php'); +} elseif (! file_exists($page)) { header($_SERVER["SERVER_PROTOCOL"]." 404 Not Found"); header("Status: 404 Not Found"); $_SERVER['REDIRECT_STATUS'] = 404; @@ -9,15 +26,11 @@ echo "Error 404: Documentation page for thorn $page does not exist."; include_once($_SERVER['DOCUMENT_ROOT'].'/global/footer.php'); exit(); +} else { + include_once($_SERVER['DOCUMENT_ROOT'].'/global/header.php'); + echo '<link rel="stylesheet" type="text/css" href="/global/documentation.css">'; + get_page_contents($page); + include_once($_SERVER['DOCUMENT_ROOT'].'/global/footer.php'); } -include_once($_SERVER['DOCUMENT_ROOT'].'/global/header.php'); -echo '<link rel="stylesheet" type="text/css" href="/global/documentation.css">'; -echo '<div style="thorndoc">'; -$contents = file_get_contents($page); -preg_match('/.*<body[^>]*>(.*)<\/body>.*/sm', $contents, $body); -echo $body[1]; -echo '</div>'; -include_once($_SERVER['DOCUMENT_ROOT'].'/global/footer.php'); - ?> File [modified]: index.php Delta lines: +3 -0 =================================================================== --- documentation/ThornDoc/index.php 2014-03-14 14:47:32 UTC (rev 1145) +++ documentation/ThornDoc/index.php 2014-03-14 15:15:32 UTC (rev 1146) @@ -17,6 +17,9 @@ -->  +Thorn documentation is available for the individual thorns and arrangements listed below. +It is alternatively available as a <a href="All/">single HTML file</a>. + <h4>Arrangements</h4> <?php

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[svn:einsteintoolkit] www/global/ (Rev. 1145)
by barry.wardell＠gmail.com 14 Mar '14

14 Mar '14

User: barry.wardell Date: 2014/03/14 09:47 AM Modified: /global/ documentation.css Log: Small improvement to style of tables in ThornDoc pages File Changes: Directory: /global/ =================== File [modified]: documentation.css Delta lines: +2 -0 =================================================================== --- global/documentation.css 2014-03-14 13:48:49 UTC (rev 1144) +++ global/documentation.css 2014-03-14 14:47:32 UTC (rev 1145) @@ -11,6 +11,7 @@ table.equation td { border: 0px; } table.tabbing td { border: 0px; } table.tabular td { border: 0px; } + table.tabular tr.hline { display:none;} .Canvas { position:relative; } .abstract p {margin-left:5%; margin-right:5%;} .centerline {text-align:center;} @@ -66,6 +67,7 @@ .framebox-c, .framebox-l, .framebox-r { padding-left:3.0pt; padding-right:3.0pt; text-indent:0pt; border:solid black 0.4pt; } .framebox-l {text-align:left;} .framebox-r {text-align:right;} +.gsc-results .gsc-cursor-box .gsc-cursor-current-page { color: #FFFFFF;} .hline hr, .cline hr{ height : 1px; margin:0px; } .index-item, .index-subitem, .index-subsubitem {display:block} .marginpar p{margin-top:0.4em; margin-bottom:0.4em;}

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[svn:einsteintoolkit] www/documentation/ThornDoc/ (Rev. 1144)
by barry.wardell＠gmail.com 14 Mar '14

14 Mar '14

User: barry.wardell Date: 2014/03/14 08:48 AM Added: /documentation/ThornDoc/AEIThorns/Trigger/ documentation0x.png, documentation10x.png, documentation1x.png, documentation2x.png, documentation3x.png, documentation4x.png, documentation5x.png, documentation6x.png, documentation7x.png, documentation8x.png, documentation9x.png /documentation/ThornDoc/CactusBase/IOASCII/ documentation0x.png, documentation1x.png, documentation2x.png, documentation3x.png, documentation4x.png, documentation5x.png /documentation/ThornDoc/CactusBase/IOBasic/ documentation0x.png, documentation1x.png, documentation2x.png /documentation/ThornDoc/CactusBase/IOUtil/ documentation4x.png, documentation5x.png, documentation6x.png /documentation/ThornDoc/CactusExamples/SampleIO/ documentation0x.png /documentation/ThornDoc/CactusIO/IOJpeg/ documentation0x.png, documentation1x.png /documentation/ThornDoc/CactusNumerical/InterpToArray/ documentation1x.png, documentation2x.png, documentation3x.png, documentation4x.png, documentation5x.png, documentation6x.png, documentation7x.png /documentation/ThornDoc/CactusPUGHIO/IOHDF5/ documentation0x.png, documentation1x.png /documentation/ThornDoc/CactusUtils/TimerReport/ documentation0x.png, documentation1x.png /documentation/ThornDoc/Carpet/CarpetIOASCII/ documentation0x.png, documentation1x.png, documentation2x.png, documentation3x.png /documentation/ThornDoc/Carpet/CarpetIOHDF5/ documentation0x.png, documentation1x.png, documentation2x.png, documentation3x.png, documentation4x.png /documentation/ThornDoc/Carpet/CarpetIOScalar/ documentation0x.png /documentation/ThornDoc/Carpet/CarpetReduce/ documentation0x.png /documentation/ThornDoc/EinsteinAnalysis/AHFinderDirect/ documentation12x.png, documentation13x.png, documentation14x.png, documentation15x.png, documentation16x.png, documentation17x.png, documentation18x.png, documentation19x.png, documentation20x.png, documentation21x.png, documentation22x.png, documentation23x.png 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documentation30x.png, documentation31x.png, documentation32x.png, documentation9x.png /documentation/ThornDoc/EinsteinInitialData/TwoPunctures/ documentation0x.png /documentation/ThornDoc/LSUThorns/QuasiLocalMeasures/ documentation13x.png, documentation14x.png, documentation15x.png /documentation/ThornDoc/PITTNullCode/NullEvolve/ documentation0x.png, documentation10x.png, documentation11x.png, documentation12x.png, documentation13x.png, documentation14x.png, documentation15x.png, documentation1x.png, documentation2x.png, documentation3x.png, documentation4x.png, documentation5x.png, documentation6x.png, documentation7x.png, documentation8x.png, documentation9x.png /documentation/ThornDoc/PITTNullCode/SphericalHarmonicDecomp/ documentation0x.png Removed: /documentation/ThornDoc/EinsteinEOS/EOS_Omni/ documentation4x.png, documentation5x.png Modified: /documentation/ThornDoc/AEIThorns/ADMMass/ documentation.html, documentation0x.png, documentation1x.png, documentation2x.png /documentation/ThornDoc/AEIThorns/AEILocalInterp/ documentation.html, documentation0x.png, documentation10.html, documentation10x.png, documentation11x.png, documentation12x.png, documentation13x.png, documentation14x.png, documentation15x.png, documentation16x.png, documentation17x.png, documentation18x.png, documentation19x.png, documentation1x.png, documentation2.html, documentation20x.png, documentation21x.png, documentation22x.png, documentation23x.png, documentation24x.png, documentation25x.png, documentation26x.png, documentation27x.png, documentation28x.png, documentation29x.png, documentation2x.png, documentation3.html, documentation3x.png, documentation4.html, documentation4x.png, documentation5.html, documentation5x.png, documentation6.html, documentation6x.png, documentation7.html, documentation7x.png, documentation8.html, documentation8x.png, documentation9.html, documentation9x.png /documentation/ThornDoc/AEIThorns/PunctureTracker/ documentation.html 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/documentation/ThornDoc/CactusBase/IOASCII/ documentation.html /documentation/ThornDoc/CactusBase/IOBasic/ documentation.html /documentation/ThornDoc/CactusBase/IOUtil/ documentation.html, documentation0x.png, documentation1x.png, documentation2x.png, documentation3x.png /documentation/ThornDoc/CactusBase/InitBase/ documentation.html /documentation/ThornDoc/CactusBase/SymBase/ documentation.html, documentation0x.png, documentation1x.png, documentation2x.png, documentation3x.png /documentation/ThornDoc/CactusBase/Time/ documentation.html, documentation0x.png, documentation1x.png, documentation2x.png, documentation3x.png /documentation/ThornDoc/CactusConnect/HTTPD/ documentation.html /documentation/ThornDoc/CactusConnect/HTTPDExtra/ documentation.html /documentation/ThornDoc/CactusConnect/Socket/ documentation.html /documentation/ThornDoc/CactusDoc/CoreDoc/ documentation.html, documentation0x.png, documentation1x.png, documentation2x.png, documentation3x.png, documentation4x.png 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