Commits September 2016

commits@lists.einsteintoolkit.org

4 participants
15 discussions

[svn:einsteintoolkit] www/about/gallery/gw150914/ (Rev. 1639)
by barry.wardell＠gmail.com 30 Sep '16

30 Sep '16

User: barry.wardell Date: 2016/09/30 08:14 AM Modified: /about/gallery/gw150914/ compile_and_run.php Log: GW150914: clarify that the allocation should be defined during simfactory setup File Changes: Directory: /about/gallery/gw150914/ =================================== File [modified]: compile_and_run.php Delta lines: +2 -0 =================================================================== --- about/gallery/gw150914/compile_and_run.php 2016-09-30 13:04:39 UTC (rev 1638) +++ about/gallery/gw150914/compile_and_run.php 2016-09-30 13:14:25 UTC (rev 1639) @@ -22,6 +22,8 @@ SimFactory supports, run <pre>simfactory/bin/sim setup</pre> Hit enter for each question if the default is OK. + If you intend to run on a cluster that requires an + allocation, make sure to configure this during setup. </li> <li>If you are not using a cluster supported by SimFactory, see <a href="https://docs.einsteintoolkit.org/et-docs/Compiling_the_Einstein_Toolkit">Compiling

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[svn:einsteintoolkit] www/about/gallery/ (Rev. 1638)
by barry.wardell＠gmail.com 30 Sep '16

30 Sep '16

User: barry.wardell Date: 2016/09/30 08:04 AM Modified: /about/gallery/ index.php Log: GW150914: fix thumbnail image File Changes: Directory: /about/gallery/ ========================== File [modified]: index.php Delta lines: +1 -1 =================================================================== --- about/gallery/index.php 2016-09-30 13:01:41 UTC (rev 1637) +++ about/gallery/index.php 2016-09-30 13:04:39 UTC (rev 1638) @@ -11,7 +11,7 @@ <li class="gallerytable"> <div class="gallerytable"> <h4 class="gallerytable"><a href="gw150914">Binary black hole GW150914</a></h4> - <a href="gw150914"><img src="gw150914/RePsi4_sm.png" srcset="RePsi4_sm_2x.png 2x" alt="R_{abcd} R^{abcd}" width="357" height="300" class="gallerytable"/></a> + <a href="gw150914"><img src="gw150914/RePsi4_sm.png" srcset="gw150914/RePsi4_sm_2x.png 2x" alt="R_{abcd} R^{abcd}" width="357" height="300" class="gallerytable"/></a> </div> </li> <li class="gallerytable">

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[svn:einsteintoolkit] www/about/gallery/ (Rev. 1637)
by barry.wardell＠gmail.com 30 Sep '16

30 Sep '16

User: barry.wardell Date: 2016/09/30 08:01 AM Modified: /about/gallery/ index.php Log: Add link to gw150914 gallery File Changes: Directory: /about/gallery/ ========================== File [modified]: index.php Delta lines: +6 -0 =================================================================== --- about/gallery/index.php 2016-09-30 11:39:56 UTC (rev 1636) +++ about/gallery/index.php 2016-09-30 13:01:41 UTC (rev 1637) @@ -10,6 +10,12 @@ <ul class="gallerytable"> <li class="gallerytable"> <div class="gallerytable"> + <h4 class="gallerytable"><a href="gw150914">Binary black hole GW150914</a></h4> + <a href="gw150914"><img src="gw150914/RePsi4_sm.png" srcset="RePsi4_sm_2x.png 2x" alt="R_{abcd} R^{abcd}" width="357" height="300" class="gallerytable"/></a> + </div> + </li> + <li class="gallerytable"> + <div class="gallerytable"> <h4 class="gallerytable"><a href="tov">Single, stable neutron star</a></h4> <a href="tov"><img src="tov/rho_max.png" class="gallerytable" alt="Central density"/></a> </div>

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[svn:einsteintoolkit] www/about/gallery/gw150914/ (Rev. 1636)
by ian.hinder＠aei.mpg.de 30 Sep '16

30 Sep '16

User: hinder Date: 2016/09/30 06:39 AM Modified: /about/gallery/gw150914/ etgw150914.bib, index.php Log: GW150914: Add Kranc and SimFactory to citation request File Changes: Directory: /about/gallery/gw150914/ =================================== File [modified]: etgw150914.bib Delta lines: +27 -1 =================================================================== --- about/gallery/gw150914/etgw150914.bib 2016-09-30 10:44:36 UTC (rev 1635) +++ about/gallery/gw150914/etgw150914.bib 2016-09-30 11:39:56 UTC (rev 1636) @@ -1,5 +1,5 @@ -wardell_barry_2016_155394,Loffler:2011ay,Pollney:2009yz,Schnetter:2003rb,Thornburg:2003sf,Ansorg:2004ds,Dreyer:2002mx,Goodale:2002a,Brown:2008sb +wardell_barry_2016_155394,Loffler:2011ay,Pollney:2009yz,Schnetter:2003rb,Thornburg:2003sf,Ansorg:2004ds,Dreyer:2002mx,Goodale:2002a,Brown:2008sb,Husa:2004ip,Thomas:2010aa @misc{wardell_barry_2016_155394, author = {Wardell, Barry and @@ -139,3 +139,29 @@ primaryClass = "gr-qc", SLACcitation = "%%CITATION = ARXIV:0809.3533;%%" } + +@Article{Husa:2004ip, + author = "Husa, Sascha and Hinder, Ian and Lechner, + Christiane", + title = "{Kranc: a Mathematica application to generate + numerical codes for tensorial evolution equations}", + journal = "Comput. Phys. Commun.", + volume = 174, + year = 2006, + pages = "983-1004", + eprint = "arXiv:gr-qc/0404023", + SLACcitation = "%%CITATION = GR-QC/0404023;%%" +} + +@inproceedings{Thomas:2010aa, + author={Thomas, M.W. and Schnetter, E.}, + booktitle={Grid Computing (GRID), 2010 11th IEEE/ACM International Conference on}, + title={Simulation Factory: Taming application configuration and workflow on high-end resources}, + year={2010}, + month={oct.}, + volume={}, + number={}, + pages={369 -378}, + doi={10.1109/GRID.2010.5698010}, + eprint = {arXiv:1008.4571 [cs.DC]}, +} File [modified]: index.php Delta lines: +2 -1 =================================================================== --- about/gallery/gw150914/index.php 2016-09-30 10:44:36 UTC (rev 1635) +++ about/gallery/gw150914/index.php 2016-09-30 11:39:56 UTC (rev 1636) @@ -49,7 +49,8 @@ the Carpet mesh-refinement driver, the apparent horizon finder AHFinderDirect, the TwoPunctures initial data code, QuasiLocalMeasures, Cactus, and the McLachlan spacetime -evolution code [<a href="etgw150914.bib">BibTeX</a>].</p> +evolution code, the Kranc code generation package, and the Simulation +Factory. [<a href="etgw150914.bib">BibTeX</a>].</p> <h3>Simulation details</h3> <div style="display:inline-block; margin-right: 20px">

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[svn:einsteintoolkit] www/about/gallery/gw150914/ (Rev. 1635)
by ian.hinder＠aei.mpg.de 30 Sep '16

30 Sep '16

User: hinder Date: 2016/09/30 05:44 AM Added: /about/gallery/gw150914/ etgw150914.bib Modified: /about/gallery/gw150914/ index.php Log: GW150914: Add citation information File Changes: Directory: /about/gallery/gw150914/ =================================== File [added]: etgw150914.bib Delta lines: +141 -0 =================================================================== --- about/gallery/gw150914/etgw150914.bib (rev 0) +++ about/gallery/gw150914/etgw150914.bib 2016-09-30 10:44:36 UTC (rev 1635) @@ -0,0 +1,141 @@ + +wardell_barry_2016_155394,Loffler:2011ay,Pollney:2009yz,Schnetter:2003rb,Thornburg:2003sf,Ansorg:2004ds,Dreyer:2002mx,Goodale:2002a,Brown:2008sb + +@misc{wardell_barry_2016_155394, + author = {Wardell, Barry and + Hinder, Ian and + Bentivegna, Eloisa}, + title = {{Simulation of GW150914 binary black hole merger + using the Einstein Toolkit}}, + month = sep, + year = 2016, + doi = {10.5281/zenodo.155394}, + url = {https://doi.org/10.5281/zenodo.155394} +} + +@article{Loffler:2011ay, + author = "Loffler, Frank and others", + title = "{The Einstein Toolkit: A Community Computational + Infrastructure for Relativistic Astrophysics}", + journal = "Class. Quant. Grav.", + volume = "29", + year = "2012", + pages = "115001", + doi = "10.1088/0264-9381/29/11/115001", + eprint = "1111.3344", + archivePrefix = "arXiv", + primaryClass = "gr-qc", + SLACcitation = "%%CITATION = ARXIV:1111.3344;%%" +} + +@article{Pollney:2009yz, + author = "Pollney, Denis and Reisswig, Christian and Schnetter, + Erik and Dorband, Nils and Diener, Peter", + title = "{High accuracy binary black hole simulations with an + extended wave zone}", + journal = "Phys. Rev.", + volume = "D83", + year = "2011", + pages = "044045", + doi = "10.1103/PhysRevD.83.044045", + eprint = "0910.3803", + archivePrefix = "arXiv", + primaryClass = "gr-qc", + SLACcitation = "%%CITATION = ARXIV:0910.3803;%%" +} + +@article{Schnetter:2003rb, + author = "Schnetter, Erik and Hawley, Scott H. and Hawke, Ian", + title = "{Evolutions in 3-D numerical relativity using fixed mesh + refinement}", + journal = "Class. Quant. Grav.", + volume = "21", + year = "2004", + pages = "1465-1488", + doi = "10.1088/0264-9381/21/6/014", + eprint = "gr-qc/0310042", + archivePrefix = "arXiv", + primaryClass = "gr-qc", + reportNumber = "AEI-2003-078", + SLACcitation = "%%CITATION = GR-QC/0310042;%%" +} + +@article{Thornburg:2003sf, + author = "Thornburg, Jonathan", + title = "{A Fast apparent horizon finder for three-dimensional + Cartesian grids in numerical relativity}", + journal = "Class. Quant. Grav.", + volume = "21", + year = "2004", + pages = "743-766", + doi = "10.1088/0264-9381/21/2/026", + eprint = "gr-qc/0306056", + archivePrefix = "arXiv", + primaryClass = "gr-qc", + reportNumber = "AEI-2003-049", + SLACcitation = "%%CITATION = GR-QC/0306056;%%" +} + +@article{Ansorg:2004ds, + author = "Ansorg, Marcus and Bruegmann, Bernd and Tichy, Wolfgang", + title = "{A Single-domain spectral method for black hole puncture + data}", + journal = "Phys. Rev.", + volume = "D70", + year = "2004", + pages = "064011", + doi = "10.1103/PhysRevD.70.064011", + eprint = "gr-qc/0404056", + archivePrefix = "arXiv", + primaryClass = "gr-qc", + reportNumber = "CGPG-03-12-3", + SLACcitation = "%%CITATION = GR-QC/0404056;%%" +} + +@article{Dreyer:2002mx, + author = "Dreyer, Olaf and Krishnan, Badri and Shoemaker, Deirdre + and Schnetter, Erik", + title = "{Introduction to isolated horizons in numerical + relativity}", + journal = "Phys. Rev.", + volume = "D67", + year = "2003", + pages = "024018", + doi = "10.1103/PhysRevD.67.024018", + eprint = "gr-qc/0206008", + archivePrefix = "arXiv", + primaryClass = "gr-qc", + SLACcitation = "%%CITATION = GR-QC/0206008;%%" +} + +@InProceedings{Goodale:2002a, + suggested-for ={Cactus/Cactus}, + author = {Tom Goodale and Gabrielle Allen and Gerd Lanfermann + and Joan Mass{\'o} and Thomas Radke and Edward + Seidel and John Shalf}, + title = {The {Cactus} Framework and Toolkit: Design and + Applications}, + booktitle = {Vector and Parallel Processing -- VECPAR'2002, 5th + International Conference, Lecture Notes in Computer + Science}, + year = 2003, + address = {Berlin}, + publisher = {Springer}, + url = {http://edoc.mpg.de/3341}, +} + +@article{Brown:2008sb, + author = "Brown, J. David and Diener, Peter and Sarbach, Olivier + and Schnetter, Erik and Tiglio, Manuel", + title = "{Turduckening black holes: An Analytical and + computational study}", + journal = "Phys. Rev.", + volume = "D79", + year = "2009", + pages = "044023", + doi = "10.1103/PhysRevD.79.044023", + eprint = "0809.3533", + archivePrefix = "arXiv", + primaryClass = "gr-qc", + SLACcitation = "%%CITATION = ARXIV:0809.3533;%%" +} File [modified]: index.php Delta lines: +8 -0 =================================================================== --- about/gallery/gw150914/index.php 2016-09-27 10:39:47 UTC (rev 1634) +++ about/gallery/gw150914/index.php 2016-09-30 10:44:36 UTC (rev 1635) @@ -43,6 +43,14 @@ and 3D output, and totals several terabytes in size; as such it will be made available for download once a suitable distribution method has been found.</p> +<p>We ask that if you make use of the parameter file or the example data, +then please cite the GW150914 Einstein Toolkit example and data, +the Einstein Toolkit, the Llama multi-block infrastructure, +the Carpet mesh-refinement driver, the apparent horizon finder +AHFinderDirect, the TwoPunctures initial data code, +QuasiLocalMeasures, Cactus, and the McLachlan spacetime +evolution code [<a href="etgw150914.bib">BibTeX</a>].</p> + <h3>Simulation details</h3> <div style="display:inline-block; margin-right: 20px"> <h4>Physical parameters</h4>

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[svn:einsteintoolkit] www/about/gallery/gw150914/ (Rev. 1634)
by barry.wardell＠gmail.com 27 Sep '16

27 Sep '16

User: barry.wardell Date: 2016/09/27 05:39 AM Modified: /about/gallery/gw150914/ index.php Log: gw150914 gallery: update dataset url File Changes: Directory: /about/gallery/gw150914/ =================================== File [modified]: index.php Delta lines: +1 -1 =================================================================== --- about/gallery/gw150914/index.php 2016-09-25 15:01:52 UTC (rev 1633) +++ about/gallery/gw150914/index.php 2016-09-27 10:39:47 UTC (rev 1634) @@ -93,7 +93,7 @@ <h3>Simulation data</h3> <p>Lightweight simulation data with only a small number of iterations of 3D output is available for download from Zenodo:</p> -<a href="http://dx.doi.org/10.5281/zenodo.60213"><img src="https://zenodo.org/badge/doi/10.5281/zenodo.60213.svg" alt="10.5281/zenodo.60213"></a> +<a href="http://dx.doi.org/10.5281/zenodo.155394"><img src="https://zenodo.org/badge/doi/10.5281/zenodo.155394.svg" alt="10.5281/zenodo.155394"></a> <p>The full simulation comprises several terabytes of data and can be made available upon request.</p>

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[svn:einsteintoolkit] www/about/gallery/NsNsToHMNS/ (Rev. 1633)
by rhaas＠tapir.caltech.edu 25 Sep '16

25 Sep '16

User: rhaas Date: 2016/09/25 10:01 AM Modified: /about/gallery/NsNsToHMNS/ NsNsToHMNS.par Log: Gallery: use "yes" for useSpatialBetaDriver in NsNsToHMS.par example File Changes: Directory: /about/gallery/NsNsToHMNS/ ===================================== File [modified]: NsNsToHMNS.par Delta lines: +3 -1 =================================================================== --- about/gallery/NsNsToHMNS/NsNsToHMNS.par 2016-09-25 13:53:34 UTC (rev 1632) +++ about/gallery/NsNsToHMNS/NsNsToHMNS.par 2016-09-25 15:01:52 UTC (rev 1633) @@ -353,7 +353,9 @@ ML_BSSN::ML_shift_bound = "none" ML_BSSN::ML_dtshift_bound = "none" -ML_BSSN::UseSpatialBetaDriver = 1 +# use this for ET releases starting with ET_2015_11 at which point "yes" is no longer accepted +# ML_BSSN::UseSpatialBetaDriver = 1 +ML_BSSN::UseSpatialBetaDriver = "yes" ML_BSSN::SpatialBetaDriverRadius = 50 ML_BSSN::apply_dissipation = "never"

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[svn:einsteintoolkit] www/about/gallery/NsNsToHMNS/ (Rev. 1632)
by rhaas＠tapir.caltech.edu 25 Sep '16

25 Sep '16

User: rhaas Date: 2016/09/25 08:53 AM Modified: /about/gallery/NsNsToHMNS/ NsNsToHMNS.th Log: gallery: fix download location for NSTracker File Changes: Directory: /about/gallery/NsNsToHMNS/ ===================================== File [modified]: NsNsToHMNS.th Delta lines: +5 -1 =================================================================== --- about/gallery/NsNsToHMNS/NsNsToHMNS.th 2016-08-22 14:28:02 UTC (rev 1631) +++ about/gallery/NsNsToHMNS/NsNsToHMNS.th 2016-09-25 13:53:34 UTC (rev 1632) @@ -471,12 +471,16 @@ !TYPE = svn !URL = https://svn.cct.lsu.edu/repos/numrel/$1/$2/branches/$ET_RELEASE !CHECKOUT = -LSUThorns/NSTracker LSUThorns/PeriodicCarpet LSUThorns/QuasiLocalMeasures LSUThorns/SummationByParts LSUThorns/Vectors +!TARGET = $ARR +!TYPE = svn +!URL = https://svn.cct.lsu.edu/repos/numrel/$1/$2/trunk +!CHECKOUT = +LSUThorns/NSTracker # From Kranc (required e.g. by McLachlan)

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commit/EinsteinEvolve: 2 new changesets
by Bitbucket 07 Sep '16

07 Sep '16

2 new commits in EinsteinEvolve: https://bitbucket.org/einsteintoolkit/einsteinevolve/commits/33f76345e5dc/ Changeset: 33f76345e5dc Branch: None User: rdepietri Date: 2016-09-01 15:30:31+00:00 Summary: Modification intruduced for the paper: Phys. Rev. D93, 064047 (2016), arXiv:1509.08804 Affected #: 4 files https://bitbucket.org/einsteintoolkit/einsteinevolve/commits/2e4e9117d67d/ Changeset: 2e4e9117d67d Branch: PARMA User: Roberto De Pietri Date: 2016-09-05 17:55:22+00:00 Summary: Set default no to use cxx code for compatibility with the testsuite that requires ENO Affected #: 1 file Repository URL: https://bitbucket.org/einsteintoolkit/einsteinevolve/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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commit/EinsteinEOS: 3 new changesets
by Bitbucket 07 Sep '16

07 Sep '16

3 new commits in EinsteinEOS: https://bitbucket.org/einsteintoolkit/einsteineos/commits/02c0122b741f/ Changeset: 02c0122b741f Branch: None User: rdepietri Date: 2016-09-01 15:48:23+00:00 Summary: Modification for work: Phys. Rev. D93, 064047 (2016), arXiv:1509.08804 Affected #: 1 file https://bitbucket.org/einsteintoolkit/einsteineos/commits/caa4b232c419/ Changeset: caa4b232c419 Branch: None User: rdepietri Date: 2016-09-03 07:00:35+00:00 Summary: Now it support hybrid EOS with up to ten pieces Affected #: 5 files https://bitbucket.org/einsteintoolkit/einsteineos/commits/da918322c56f/ Changeset: da918322c56f Branch: PARMA User: Roberto De Pietri Date: 2016-09-05 18:11:55+00:00 Summary: Bug corrected on allocation of teh paramter set for back-compatibility Affected #: 1 file Repository URL: https://bitbucket.org/einsteintoolkit/einsteineos/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.

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Commits September 2016