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[svn:einsteintoolkit] www/info/citing/ (Rev. 426)
by knarf＠cct.lsu.edu 21 Nov '10

21 Nov '10

User: knarf Date: 2010/11/21 12:02 AM Modified: /info/citing/ index.php Log: reorder list File Changes: Directory: /info/citing/ ======================== File [modified]: index.php Delta lines: +4 -5 =================================================================== --- info/citing/index.php 2010-11-21 06:00:14 UTC (rev 425) +++ info/citing/index.php 2010-11-21 06:02:05 UTC (rev 426) @@ -25,15 +25,14 @@ of the equations, algorithms, and verification of components. A list of components for which this applies is provided below. -<li> Authors should consult the full publication page for the - Einstein Toolkit (not yet in place) to determine if in their judgement it would be -appropriate to provide citations for additional components than -described in 1) and 2). - <li> Authors should consult the list of <b>suggested</b> publications for software components from the toolkit that are used to obtain published results. A list of components for which this applies is provided below. +<li> Authors should consult the full publication page for the + Einstein Toolkit (not yet in place) to determine if in their judgement it would be + appropriate to provide citations for additional components than described in 1), 2) and 3). + </ol>

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[svn:einsteintoolkit] www/info/citing/ (Rev. 425)
by knarf＠cct.lsu.edu 21 Nov '10

21 Nov '10

User: knarf Date: 2010/11/21 12:00 AM Modified: /info/citing/ index.php Log: mention suggested publications File Changes: Directory: /info/citing/ ======================== File [modified]: index.php Delta lines: +4 -0 =================================================================== --- info/citing/index.php 2010-11-21 05:53:36 UTC (rev 424) +++ info/citing/index.php 2010-11-21 06:00:14 UTC (rev 425) @@ -30,6 +30,10 @@ appropriate to provide citations for additional components than described in 1) and 2). +<li> Authors should consult the list of <b>suggested</b> publications for +software components from the toolkit that are used to obtain published results. +A list of components for which this applies is provided below. + </ol>

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[svn:einsteintoolkit] www/info/citing/ (Rev. 424)
by knarf＠cct.lsu.edu 20 Nov '10

20 Nov '10

User: knarf Date: 2010/11/20 11:53 PM Modified: /info/citing/ parse_citations.pl Log: fix table headings File Changes: Directory: /info/citing/ ======================== File [modified]: parse_citations.pl Delta lines: +1 -1 =================================================================== --- info/citing/parse_citations.pl 2010-11-21 05:52:35 UTC (rev 423) +++ info/citing/parse_citations.pl 2010-11-21 05:53:36 UTC (rev 424) @@ -9,7 +9,7 @@ my $command = "../../bibtex/parse_bibtex.pl --input=../../manifest/einsteintoolkit.bib --filter=$filter"; `$command > $tmpfile`; # get bibtex key list - my $keys = `$command --showkey=required-for`; + my $keys = `$command --showkey=$filter`; # generate preliminary html my $html = join("", `../../bibtex/bib2xhtml -u -s unsortlist $tmpfile`); unlink($tmpfile);

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[svn:einsteintoolkit] www/info/citing/ (Rev. 423)
by knarf＠cct.lsu.edu 20 Nov '10

20 Nov '10

User: knarf Date: 2010/11/20 11:52 PM Modified: /info/citing/ parse_citations.pl Log: fix bibtex entry key names File Changes: Directory: /info/citing/ ======================== File [modified]: parse_citations.pl Delta lines: +4 -4 =================================================================== --- info/citing/parse_citations.pl 2010-11-21 05:48:30 UTC (rev 422) +++ info/citing/parse_citations.pl 2010-11-21 05:52:35 UTC (rev 423) @@ -42,7 +42,7 @@ print "</table>\n"; } -print "<h2>Requested</h2>\n"; -&one_filter("requested_for"); -print "<h2>Suggested</h2>\n"; -&one_filter("suggested_for"); +print "<h3>Requested</h3>\n"; +&one_filter("requested-for"); +print "<h3>Suggested</h3>\n"; +&one_filter("suggested-for");

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 51)
by knarf＠cct.lsu.edu 20 Nov '10

20 Nov '10

User: knarf Date: 2010/11/20 11:52 PM Modified: /trunk/ einsteintoolkit.bib Log: required->requested to match guidelines File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.bib Delta lines: +14 -14 =================================================================== --- trunk/einsteintoolkit.bib 2010-11-21 04:29:27 UTC (rev 50) +++ trunk/einsteintoolkit.bib 2010-11-21 05:52:19 UTC (rev 51) @@ -4,9 +4,9 @@ complete or correct author lists. In addition to the standard bibtex keys there are two new ones: -required-for and suggested-for. Both contain space-separated lists of +requested-for and suggested-for. Both contain space-separated lists of Arrangement/Thorn names, specifying for which thorns this particular -publication is either required or suggested. +publication is either requested or suggested. The entries are sorted alphabetically by their bibtex keys, which corresponds to their first author. @@ -14,7 +14,7 @@ @Unpublished{Alcubierre2003:BBH0-excision, - required-for = "EinsteinEvolve/LegoExcision", + requested-for = "EinsteinEvolve/LegoExcision", author = {Miguel Alcubierre and Bernd Br{\"u}gmann and Peter Diener and Frank Herrmann and Denis Pollney and Edward Seidel and Ryoji Takahashi}, @@ -25,7 +25,7 @@ } @Article{Ansorg:2004ds, - required-for = "EinsteinInitialData/TwoPunctures", + requested-for = "EinsteinInitialData/TwoPunctures", author = "Ansorg, Marcus and Br{\"u}gmann, Bernd and Tichy, Wolfgang", title = "{A single-domain spectral method for black hole @@ -41,7 +41,7 @@ } @Article{Baiotti:2004wn, - required-for = "EinsteinEvolve/GRHydro", + requested-for = "EinsteinEvolve/GRHydro", author = "Luca Baiotti and Ian Hawke and Pedro J. Montero and Frank L{\"o}ffler and Luciano Rezzolla and Nikolaos Stergioulas and Jose A. Font and Ed Seidel", @@ -59,7 +59,7 @@ } @Article{Brown:2007pg, - required-for = "EinsteinInitialData/NoExcision", + requested-for = "EinsteinInitialData/NoExcision", author = "David Brown and Olivier Sarbach and Erik Schnetter and Manuel Tiglio and Peter Diener and Ian Hawke and Denis Pollney", @@ -94,7 +94,7 @@ } @Article{Diener:2003jc, - required-for = "EinsteinAnalysis/EHFinder", + requested-for = "EinsteinAnalysis/EHFinder", author = "Diener, Peter", title = "{A new general purpose event horizon finder for 3D numerical spacetimes}", @@ -109,7 +109,7 @@ } @Article{Diener:2005tn, - required-for = "LSUThorns/SummationByParts", + requested-for = "LSUThorns/SummationByParts", author = "Diener, Peter and Dorband, Ernst Nils and Schnetter, Erik and Tiglio, Manuel", title = "{New, efficient, and accurate high order derivative @@ -127,7 +127,7 @@ } @Article{Dreyer:2002mx, - required-for = "LSUThorns/QuasiLocalMeasures", + requested-for = "LSUThorns/QuasiLocalMeasures", author = "Dreyer, Olaf and Krishnan, Badri and Shoemaker, Deirdre and Schnetter, Erik", title = "{Introduction to Isolated Horizons in Numerical @@ -158,7 +158,7 @@ } @Article{Gourgoulhon:2000nn, - required-for = "EinsteinInitialData/Meudon_Bin_NS", + requested-for = "EinsteinInitialData/Meudon_Bin_NS", author = "Gourgoulhon, Eric and Grandclement, Philippe and Taniguchi, Keisuke and Marck, Jean-Alain and Bonazzola, Silvano", @@ -176,7 +176,7 @@ } @Article{Gourgoulhon:2001ec, - required-for = "EinsteinInitialData/Meudon_Bin_BH", + requested-for = "EinsteinInitialData/Meudon_Bin_BH", author = "Gourgoulhon, Eric and Grandclement, Philippe and Bonazzola, Silvano", title = "{Binary black holes in circular orbits. I. A global @@ -192,7 +192,7 @@ } @Article{Grandclement:2001ed, - required-for = "EinsteinInitialData/Meudon_Bin_BH", + requested-for = "EinsteinInitialData/Meudon_Bin_BH", author = "Grandclement, Philippe and Gourgoulhon, Eric and Bonazzola, Silvano", title = "{Binary black holes in circular orbits. II. @@ -224,7 +224,7 @@ } @Article{Schnetter:2003rb, - required-for = "Carpet/Carpet", + requested-for = "Carpet/Carpet", author = "Schnetter, Erik and Hawley, Scott H. and Hawke, Ian", title = "{Evolutions in 3D numerical relativity using fixed mesh refinement}", @@ -253,7 +253,7 @@ } @Article{Thornburg:2003sf, - required-for = "EinsteinAnalysis/AHFinderDirect", + requested-for = "EinsteinAnalysis/AHFinderDirect", author = "Thornburg, Jonathan", title = "{A Fast Apparent-Horizon Finder for 3-Dimensional Cartesian Grids in Numerical Relativity}",

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[svn:einsteintoolkit] www/info/citing/ (Rev. 422)
by knarf＠cct.lsu.edu 20 Nov '10

20 Nov '10

User: knarf Date: 2010/11/20 11:48 PM Modified: /info/citing/ parse_citations.pl Log: fix error in parser script File Changes: Directory: /info/citing/ ======================== File [modified]: parse_citations.pl Delta lines: +1 -3 =================================================================== --- info/citing/parse_citations.pl 2010-11-21 05:47:09 UTC (rev 421) +++ info/citing/parse_citations.pl 2010-11-21 05:48:30 UTC (rev 422) @@ -1,11 +1,9 @@ #!/usr/bin/perl use strict; -use Data::Dumper; -my $tmpfile = "/tmp/ET-citations.bib"; - sub one_filter() { + my $tmpfile = "/tmp/ET-citations.bib"; my ($filter) = @_; # create bib file my $command = "../../bibtex/parse_bibtex.pl --input=../../manifest/einsteintoolkit.bib --filter=$filter";

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[svn:einsteintoolkit] www/info/citing/ (Rev. 421)
by knarf＠cct.lsu.edu 20 Nov '10

20 Nov '10

User: knarf Date: 2010/11/20 11:47 PM Modified: /info/citing/ parse_citations.pl Log: also print suggested File Changes: Directory: /info/citing/ ======================== File [modified]: parse_citations.pl Delta lines: +43 -34 =================================================================== --- info/citing/parse_citations.pl 2010-11-21 05:41:05 UTC (rev 420) +++ info/citing/parse_citations.pl 2010-11-21 05:47:09 UTC (rev 421) @@ -4,38 +4,47 @@ my $tmpfile = "/tmp/ET-citations.bib"; -# create bib file -my $command = "../../bibtex/parse_bibtex.pl --input=../../manifest/einsteintoolkit.bib --filter=required-for"; -`$command > $tmpfile`; -# get bibtex key list -my $keys = `$command --showkey=required-for`; -# generate preliminary html -my $html = join("", `../../bibtex/bib2xhtml -u -s unsortlist $tmpfile`); -unlink($tmpfile); -# strip html frame from list -$html=~s/.*().*/$1/s; -# merge key and bibtex lists -my $delimiter = ").*/$1/s; + # merge key and bibtex lists + my $delimiter = "<!-- Authors"; + my @html_arr = split($delimiter, $html); shift(@html_arr); + my @keys_arr = split("\n", $keys); + my @arr_of_arr = (); + for (my $i=0; $i<scalar(@html_arr); $i++) { + my $key_part2 = $keys_arr[$i]; + $key_part2 =~ s/[^ ]* //g; + my $html_part = $html_arr[$i]; + $html_part =~ s/<\/?li>//g; + $html_part =~ s/<\/ul>//g; + my %elem = ($key_part2=>$delimiter.$html_part); + push(@arr_of_arr, \%elem); + } + # sort + @arr_of_arr = sort {my (@aa,@bb); @aa = keys(%$a); @bb = keys(%$b); $aa[0] cmp $bb[0]} @arr_of_arr; + # output + print "<table>\n"; + foreach my $elem (@arr_of_arr) { + my %mapp = %$elem; + my $key = (keys(%mapp))[0]; + print "<tr><th align='left'>".$key."</th><td>".$mapp{$key}."</td></tr>\n"; + } + print "</table>\n"; } -# sort -@arr_of_arr = sort {my (@aa,@bb); @aa = keys(%$a); @bb = keys(%$b); $aa[0] cmp $bb[0]} @arr_of_arr; -# output -print "<table>\n"; -foreach my $elem (@arr_of_arr) { - my %mapp = %$elem; - my $key = (keys(%mapp))[0]; - print "<tr><th align='left'>".$key."</th><td>".$mapp{$key}."</td></tr>\n"; -} -print "</table>\n"; + +print "<h2>Requested</h2>\n"; +&one_filter("requested_for"); +print "<h2>Suggested</h2>\n"; +&one_filter("suggested_for");

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[svn:einsteintoolkit] www/info/citing/ (Rev. 420)
by knarf＠cct.lsu.edu 20 Nov '10

20 Nov '10

User: knarf Date: 2010/11/20 11:41 PM Modified: /info/citing/ index.php Log: link bibtex file File Changes: Directory: /info/citing/ ======================== File [modified]: index.php Delta lines: +1 -0 =================================================================== --- info/citing/index.php 2010-11-21 05:36:54 UTC (rev 419) +++ info/citing/index.php 2010-11-21 05:41:05 UTC (rev 420) @@ -46,5 +46,6 @@ echo $line."\n"; } ?> +(bibtex <a href="../../manifest/einsteintoolkit.bib">file</a>) <?php include_once($_SERVER['DOCUMENT_ROOT'].'/global/footer.php');?>

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[svn:einsteintoolkit] www/info/citing/ (Rev. 419)
by knarf＠cct.lsu.edu 20 Nov '10

20 Nov '10

User: knarf Date: 2010/11/20 11:36 PM Modified: /info/citing/ parse_citations.pl Log: fix tool path again File Changes: Directory: /info/citing/ ======================== File [modified]: parse_citations.pl Delta lines: +1 -1 =================================================================== --- info/citing/parse_citations.pl 2010-11-21 05:35:52 UTC (rev 418) +++ info/citing/parse_citations.pl 2010-11-21 05:36:54 UTC (rev 419) @@ -10,7 +10,7 @@ # get bibtex key list my $keys = `$command --showkey=required-for`; # generate preliminary html -my $html = join("", `../../bib2xhtml -u -s unsortlist $tmpfile`); +my $html = join("", `../../bibtex/bib2xhtml -u -s unsortlist $tmpfile`); unlink($tmpfile); # strip html frame from list $html=~s/.*(<!-- BEGIN BIB)/$1/s;

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[svn:einsteintoolkit] www/info/citing/ (Rev. 418)
by knarf＠cct.lsu.edu 20 Nov '10

20 Nov '10

User: knarf Date: 2010/11/20 11:35 PM Modified: /info/citing/ parse_citations.pl Log: fix tool path File Changes: Directory: /info/citing/ ======================== File [modified]: parse_citations.pl Delta lines: +1 -1 =================================================================== --- info/citing/parse_citations.pl 2010-11-21 05:33:21 UTC (rev 417) +++ info/citing/parse_citations.pl 2010-11-21 05:35:52 UTC (rev 418) @@ -10,7 +10,7 @@ # get bibtex key list my $keys = `$command --showkey=required-for`; # generate preliminary html -my $html = join("", `bib2xhtml -u -s unsortlist $tmpfile`); +my $html = join("", `../../bib2xhtml -u -s unsortlist $tmpfile`); unlink($tmpfile); # strip html frame from list $html=~s/.*(<!-- BEGIN BIB)/$1/s;

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