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[svn:einsteintoolkit] incoming/EOS_Omni/ (Rev. 13)
by cott＠tapir.caltech.edu 11 Nov '10

11 Nov '10

User: cott Date: 2010/11/11 12:01 AM Modified: /EOS_Omni/ interface.ccl /EOS_Omni/src/ make.code.defn Log: * add a multi-var call File Changes: Directory: /EOS_Omni/ ===================== File [modified]: interface.ccl Delta lines: +25 -0 =================================================================== --- EOS_Omni/interface.ccl 2010-11-03 16:49:03 UTC (rev 12) +++ EOS_Omni/interface.ccl 2010-11-11 06:01:51 UTC (rev 13) @@ -99,6 +99,31 @@ PROVIDES FUNCTION EOS_Omni_RestMassDensityFromEpsPress WITH EOS_Omni_EOS_RestMassDensityFromEpsPress LANGUAGE Fortran ################################################################################ +# short and long and specific calls + +void FUNCTION EOS_Omni_short(CCTK_INT IN eoskey, \ + CCTK_INT IN havetemp, \ + CCTK_REAL IN rf_precision, \ + CCTK_INT IN npoints, \ + CCTK_REAL IN ARRAY rho, \ + CCTK_REAL INOUT ARRAY eps, \ + CCTK_REAL INOUT ARRAY temp, \ + CCTK_REAL IN ARRAY ye, \ + CCTK_REAL OUT ARRAY press, \ + CCTK_REAL OUT ARRAY entropy, \ + CCTK_REAL OUT ARRAY cs2, \ + CCTK_REAL OUT ARRAY dedt, \ + CCTK_REAL OUT ARRAY dpderho, \ + CCTK_REAL OUT ARRAY dpdrhoe, \ + CCTK_REAL OUT ARRAY munu, \ + CCTK_INT OUT ARRAY keyerr, \ + CCTK_INT OUT anyerr) + +PROVIDES FUNCTION EOS_Omni_cs2 WITH EOS_Omni_EOS_short LANGUAGE Fortran + + + +################################################################################ # the following routines are needed for MHD con2prim based on the Harm Code void FUNCTION EOS_Omni_press_f_hrho_v2_rhoW(CCTK_INT IN eoskey, \ Directory: /EOS_Omni/src/ ========================= File [modified]: make.code.defn Delta lines: +2 -1 =================================================================== --- EOS_Omni/src/make.code.defn 2010-11-03 16:49:03 UTC (rev 12) +++ EOS_Omni/src/make.code.defn 2010-11-11 06:01:51 UTC (rev 13) @@ -2,7 +2,8 @@ # Source files in this directory SRCS = EOS_Omni_Module.F90 EOS_Omni_Startup.F90 EOS_Omni_SingleVarCalls.F90 \ - EOS_Omni_SingleVarCalls_harm.F90 EOS_Omni_Handles.c + EOS_Omni_SingleVarCalls_harm.F90 EOS_Omni_Handles.c \ + EOS_Omni_MultiVarCalls.F90 # Subdirectories containing source files SUBDIRS = nuc_eos

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 43)
by schnetter＠cct.lsu.edu 08 Nov '10

08 Nov '10

User: eschnett Date: 2010/11/08 01:27 PM Modified: /trunk/ einsteintoolkit.bib Log: Correct some entries File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.bib Delta lines: +4 -4 =================================================================== --- trunk/einsteintoolkit.bib 2010-11-08 19:26:39 UTC (rev 42) +++ trunk/einsteintoolkit.bib 2010-11-08 19:27:40 UTC (rev 43) @@ -65,8 +65,8 @@ Denis Pollney", title = "{Excision without excision: the relativistic turducken}", - journal = "Phys. Rev.", - volume = "D76", + journal = "Phys. Rev. D", + volume = 76, year = 2007, pages = 081503, eprint = "0707.3101", @@ -82,8 +82,8 @@ Olivier and Schnetter, Erik and Tiglio, Manuel", title = "{Turduckening black holes: an analytical and computational study}", - journal = "Phys. Rev.", - volume = "D79", + journal = "Phys. Rev. D", + volume = 79, year = 2009, pages = 044023, eprint = "0809.3533",

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 42)
by schnetter＠cct.lsu.edu 08 Nov '10

08 Nov '10

User: eschnett Date: 2010/11/08 01:26 PM Modified: /trunk/ einsteintoolkit.bib Log: Correct IH citation File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.bib Delta lines: +26 -12 =================================================================== --- trunk/einsteintoolkit.bib 2010-11-08 18:20:05 UTC (rev 41) +++ trunk/einsteintoolkit.bib 2010-11-08 19:26:39 UTC (rev 42) @@ -126,6 +126,22 @@ SLACcitation = "%%CITATION = GR-QC/0512001;%%" } +@Article{Dreyer:2002mx, + required-for = "LSUThorns/QuasiLocalMeasures", + author = "Dreyer, Olaf and Krishnan, Badri and Shoemaker, + Deirdre and Schnetter, Erik", + title = "{Introduction to Isolated Horizons in Numerical + Relativity}", + journal = "Phys. Rev. D", + volume = 67, + year = 2003, + pages = 024018, + eprint = "gr-qc/0206008", + archivePrefix ="arXiv", + doi = "10.1103/PhysRevD.67.024018", + SLACcitation = "%%CITATION = GR-QC/0206008;%%" +} + @Article{Giacomazzo:2007ti, suggested-for ="EinsteinEvolve/GRHydro", author = "Giacomazzo, Bruno and Rezzolla, Luciano", @@ -222,20 +238,18 @@ SLACcitation = "%%CITATION = GR-QC/0310042;%%" } -@Article{Schnetter:2006yt, - required-for = "LSUThorns/QuasiLocalMeasures", - author = "Schnetter, Erik and Krishnan, Badri and Beyer, - Florian", - title = "{Introduction to dynamical horizons in numerical - relativity}", +@Article{Thornburg:1995cp, + suggested-for ="EinsteinAnalysis/AHFinderDirect", + author = "Thornburg, Jonathan", + title = "{Finding apparent horizons in numerical relativity}", journal = "Phys. Rev. D", - volume = 74, - year = 2006, - pages = 024028, - eprint = "gr-qc/0604015", + volume = 54, + year = 1996, + pages = "4899-4918", + eprint = "gr-qc/9508014", archivePrefix ="arXiv", - doi = "10.1103/PhysRevD.74.024028", - SLACcitation = "%%CITATION = GR-QC/0604015;%%" + doi = "10.1103/PhysRevD.54.4899", + SLACcitation = "%%CITATION = GR-QC/9508014;%%" } @Article{Thornburg:2003sf,

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 41)
by schnetter＠cct.lsu.edu 08 Nov '10

08 Nov '10

User: eschnett Date: 2010/11/08 12:20 PM Added: /trunk/ einsteintoolkit.bib Log: Add thorns' citations File Changes: Directory: /trunk/ ================== File [added]: einsteintoolkit.bib Delta lines: +254 -0 =================================================================== --- trunk/einsteintoolkit.bib (rev 0) +++ trunk/einsteintoolkit.bib 2010-11-08 18:20:05 UTC (rev 41) @@ -0,0 +1,254 @@ +This files uses bibtex entries generated by SPIRES, and in particular +the bibtex keys from SPIRES. However, since SPIRES bibtex entries are +not always correct, many have been manually post-processed, e.g. to +complete or correct author lists. + +In addition to the standard bibtex keys there are two new ones: +required-for and suggested-for. Both contain space-separated lists of +Arrangement/Thorn names, specifying for which thorns this particular +publication is either required or suggested. + +The entries are sorted alphabetically by their bibtex keys, which +corresponds to their first author. + + + +@Unpublished{Alcubierre2003:BBH0-excision, + required-for = "EinsteinEvolve/LegoExcision", + author = {Miguel Alcubierre and Bernd Br{\"u}gmann and Peter + Diener and Frank Herrmann and Denis Pollney and + Edward Seidel and Ryoji Takahashi}, + title = "Testing excision techniques for dynamical {3D} black + hole evolutions", + year = 2004, + eprint = {gr-qc/0411137}, +} + +@Article{Ansorg:2004ds, + required-for = "EinsteinAnalysis/TwoPunctures", + author = "Ansorg, Marcus and Br{\"u}gmann, Bernd and Tichy, + Wolfgang", + title = "{A single-domain spectral method for black hole + puncture data}", + journal = "Phys. Rev. D", + volume = 70, + year = 2004, + pages = 064011, + eprint = "gr-qc/0404056", + archivePrefix ="arXiv", + doi = "10.1103/PhysRevD.70.064011", + SLACcitation = "%%CITATION = GR-QC/0404056;%%" +} + +@Article{Baiotti:2004wn, + required-for = "EinsteinEvolve/GRHydro", + author = "Luca Baiotti and Ian Hawke and Pedro J. Montero and + Frank L{\"o}ffler and Luciano Rezzolla and Nikolaos + Stergioulas and Jose A. Font and Ed Seidel", + title = "{Three-dimensional relativistic simulations of + rotating neutron star collapse to a Kerr black + hole}", + journal = "Phys. Rev. D", + volume = 71, + year = 2005, + pages = 024035, + eprint = "gr-qc/0403029", + archivePrefix ="arXiv", + doi = "10.1103/PhysRevD.71.024035", + SLACcitation = "%%CITATION = GR-QC/0403029;%%" +} + +@Article{Brown:2007pg, + required-for = "EinsteinAnalysis/NoExcision", + author = "David Brown and Olivier Sarbach and Erik Schnetter + and Manuel Tiglio and Peter Diener and Ian Hawke and + Denis Pollney", + title = "{Excision without excision: the relativistic + turducken}", + journal = "Phys. Rev.", + volume = "D76", + year = 2007, + pages = 081503, + eprint = "0707.3101", + archivePrefix ="arXiv", + primaryClass = "gr-qc", + doi = "10.1103/PhysRevD.76.081503", + SLACcitation = "%%CITATION = 0707.3101;%%" +} + +@Article{Brown:2008sb, + suggested-for ="Einsteinanalysis/Noexcision McLachlan/ML_BSSN", + author = "Brown, J. David and Diener, Peter and Sarbach, + Olivier and Schnetter, Erik and Tiglio, Manuel", + title = "{Turduckening black holes: an analytical and + computational study}", + journal = "Phys. Rev.", + volume = "D79", + year = 2009, + pages = 044023, + eprint = "0809.3533", + archivePrefix ="arXiv", + primaryClass = "gr-qc", + doi = "10.1103/PhysRevD.79.044023", + SLACcitation = "%%CITATION = 0809.3533;%%" +} + +@Article{Diener:2003jc, + required-for = "EinsteinAnalysis/EHFinder", + author = "Diener, Peter", + title = "{A new general purpose event horizon finder for 3D + numerical spacetimes}", + journal = "Class. Quantum Grav.", + volume = 20, + year = 2003, + pages = "4901-4918", + eprint = "gr-qc/0305039", + archivePrefix ="arXiv", + doi = "10.1088/0264-9381/20/22/014", + SLACcitation = "%%CITATION = GR-QC/0305039;%%" +} + +@Article{Diener:2005tn, + required-for = "LSUThorns/SummationByParts", + author = "Diener, Peter and Dorband, Ernst Nils and Schnetter, + Erik and Tiglio, Manuel", + title = "{New, efficient, and accurate high order derivative + and dissipation operators satisfying summation by + parts, and applications in three-dimensional + multi-block evolutions}", + journal = "J. Sci. Comput.", + volume = 32, + year = 2007, + pages = "109-145", + eprint = "gr-qc/0512001", + archivePrefix ="arXiv", + doi = "10.1007/s10915-006-9123-7", + SLACcitation = "%%CITATION = GR-QC/0512001;%%" +} + +@Article{Giacomazzo:2007ti, + suggested-for ="EinsteinEvolve/GRHydro", + author = "Giacomazzo, Bruno and Rezzolla, Luciano", + title = "{WhiskyMHD: a new numerical code for general + relativistic magnetohydrodynamics}", + journal = "Class. Quantum Grav.", + volume = 24, + year = 2007, + pages = "S235-S258", + eprint = "gr-qc/0701109", + archivePrefix ="arXiv", + doi = "10.1088/0264-9381/24/12/S16", + SLACcitation = "%%CITATION = GR-QC/0701109;%%" +} + +@Article{Gourgoulhon:2000nn, + required-for = "EinsteinInitialData/Meudon_Bin_NS", + author = "Gourgoulhon, Eric and Grandclement, Philippe and + Taniguchi, Keisuke and Marck, Jean-Alain and + Bonazzola, Silvano", + title = "{Quasiequilibrium sequences of synchronized and + irrotational binary neutron stars in general + relativity. I. Method and tests}", + journal = "Phys. Rev. D", + volume = 63, + year = 2001, + pages = 064029, + eprint = "gr-qc/0007028", + archivePrefix ="arXiv", + doi = "10.1103/PhysRevD.63.064029", + SLACcitation = "%%CITATION = GR-QC/0007028;%%" +} + +@Article{Gourgoulhon:2001ec, + required-for = "EinsteinInitialData/Meudon_Bin_BH", + author = "Gourgoulhon, Eric and Grandclement, Philippe and + Bonazzola, Silvano", + title = "{Binary black holes in circular orbits. I. A global + spacetime approach}", + journal = "Phys. Rev. D", + volume = 65, + year = 2002, + pages = 044020, + eprint = "gr-qc/0106015", + archivePrefix ="arXiv", + doi = "10.1103/PhysRevD.65.044020", + SLACcitation = "%%CITATION = GR-QC/0106015;%%" +} + +@Article{Grandclement:2001ed, + required-for = "EinsteinInitialData/Meudon_Bin_BH", + author = "Grandclement, Philippe and Gourgoulhon, Eric and + Bonazzola, Silvano", + title = "{Binary black holes in circular orbits. II. + Numerical methods and first results}", + journal = "Phys. Rev. D", + volume = 65, + year = 2002, + pages = 044021, + eprint = "gr-qc/0106016", + archivePrefix ="arXiv", + doi = "10.1103/PhysRevD.65.044021", + SLACcitation = "%%CITATION = GR-QC/0106016;%%" +} + +@Article{Hawke:2005zw, + suggested-for ="EinsteinEvolve/GRHydro", + author = "Hawke, Ian and Loffler, Frank and Nerozzi, Andrea", + title = "{Excision methods for high resolution shock + capturing schemes applied to general relativistic + hydrodynamics}", + journal = "Phys. Rev. D", + volume = 71, + year = 2005, + pages = 104006, + eprint = "gr-qc/0501054", + archivePrefix ="arXiv", + doi = "10.1103/PhysRevD.71.104006", + SLACcitation = "%%CITATION = GR-QC/0501054;%%" +} + +@Article{Schnetter:2003rb, + required-for = "Carpet/Carpet", + author = "Schnetter, Erik and Hawley, Scott H. and Hawke, Ian", + title = "{Evolutions in 3D numerical relativity using fixed + mesh refinement}", + journal = "Class. Quantum Grav.", + volume = 21, + year = 2004, + pages = "1465-1488", + eprint = "gr-qc/0310042", + archivePrefix ="arXiv", + doi = "10.1088/0264-9381/21/6/014", + SLACcitation = "%%CITATION = GR-QC/0310042;%%" +} + +@Article{Schnetter:2006yt, + required-for = "LSUThorns/QuasiLocalMeasures", + author = "Schnetter, Erik and Krishnan, Badri and Beyer, + Florian", + title = "{Introduction to dynamical horizons in numerical + relativity}", + journal = "Phys. Rev. D", + volume = 74, + year = 2006, + pages = 024028, + eprint = "gr-qc/0604015", + archivePrefix ="arXiv", + doi = "10.1103/PhysRevD.74.024028", + SLACcitation = "%%CITATION = GR-QC/0604015;%%" +} + +@Article{Thornburg:2003sf, + required-for = "EinsteinAnalysis/AHFinderDirect", + author = "Thornburg, Jonathan", + title = "{A Fast Apparent-Horizon Finder for 3-Dimensional + Cartesian Grids in Numerical Relativity}", + journal = "Class. Quantum Grav.", + volume = 21, + year = 2004, + pages = "743-766", + eprint = "gr-qc/0306056", + archivePrefix ="arXiv", + doi = "10.1088/0264-9381/21/2/026", + SLACcitation = "%%CITATION = GR-QC/0306056;%%" +}

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[svn:einsteintoolkit] WeylScal4/trunk/test/ (Rev. 66)
by roland.haas＠physics.gatech.edu 08 Nov '10

08 Nov '10

User: rhaas Date: 2010/11/08 07:08 AM Modified: /trunk/test/ teukolsky.par /trunk/test/teukolsky/ Psi4i.d.asc, Psi4i.x.asc, Psi4i.y.asc, Psi4i.z.asc, Psi4r.d.asc, Psi4r.x.asc, Psi4r.y.asc, Psi4r.z.asc Log: fix teukolsky testsuite needed two ghost zones for upwind derivatives in McLachlan, add initial extrapolatin for Gammas File Changes: Directory: /trunk/test/ ======================= File [modified]: teukolsky.par Delta lines: <Unavailable> Directory: /trunk/test/teukolsky/ ================================= File [modified]: Psi4i.d.asc Delta lines: <Unavailable> File [modified]: Psi4i.x.asc Delta lines: <Unavailable> File [modified]: Psi4i.y.asc Delta lines: <Unavailable> File [modified]: Psi4i.z.asc Delta lines: <Unavailable> File [modified]: Psi4r.d.asc Delta lines: <Unavailable> File [modified]: Psi4r.x.asc Delta lines: <Unavailable> File [modified]: Psi4r.y.asc Delta lines: <Unavailable> File [modified]: Psi4r.z.asc Delta lines: <Unavailable>

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[svn:einsteintoolkit] www/info/documentation/ (Rev. 400)
by bcmsma＠astro.rit.edu 07 Nov '10

07 Nov '10

User: bmundim Date: 2010/11/07 10:03 PM Modified: /info/documentation/ index.php Log: Link the Cactus maintainers' guide as well. File Changes: Directory: /info/documentation/ =============================== File [modified]: index.php Delta lines: +1 -0 =================================================================== --- info/documentation/index.php 2010-11-08 03:42:24 UTC (rev 399) +++ info/documentation/index.php 2010-11-08 04:03:02 UTC (rev 400) @@ -20,6 +20,7 @@ <ul> <li><a href="UsersGuide/UsersGuide.html">User's guide</a> <li><a href="ReferenceManual/ReferenceManual.html">Reference manual</a> + <li><a href="MaintGuide/MaintGuide.html">Maintainers' guide (draft version)</a> </ul> </ul>

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[svn:einsteintoolkit] www/toolkit/capabilities/ (Rev. 399)
by bcmsma＠astro.rit.edu 07 Nov '10

07 Nov '10

User: bmundim Date: 2010/11/07 09:42 PM Modified: /toolkit/capabilities/ index.php Log: Fix whisky broken link. File Changes: Directory: /toolkit/capabilities/ ================================= File [modified]: index.php Delta lines: +1 -1 =================================================================== --- toolkit/capabilities/index.php 2010-11-08 03:01:59 UTC (rev 398) +++ toolkit/capabilities/index.php 2010-11-08 03:42:24 UTC (rev 399) @@ -19,7 +19,7 @@ <h3>Relativistic Hydrodynamics</h3> -<p>The Einstein Toolkit GRHydro modules can evolve spacetimes with general relativistic hydrodynamics in 3D Cartesian coordinates. GRHydro is based on the public version of the <a href="http://whiskycode.org/">Whisky code</a> +<p>The Einstein Toolkit GRHydro modules can evolve spacetimes with general relativistic hydrodynamics in 3D Cartesian coordinates. GRHydro is based on the public version of the <a href="http://www.whiskycode.org/">Whisky code</a> developed originally by the EU Network on Sources of Gravitational Radiation and later by a collaboration led by AEI/SISSA. Features of GRHydro include at the moment: </p>

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[svn:einsteintoolkit] www/info/ (Rev. 398)
by bcmsma＠astro.rit.edu 07 Nov '10

07 Nov '10

User: bmundim Date: 2010/11/07 09:01 PM Modified: /info/ index.php Log: Add a link to the support page. File Changes: Directory: /info/ ================= File [modified]: index.php Delta lines: +2 -1 =================================================================== --- info/index.php 2010-11-08 02:55:59 UTC (rev 397) +++ info/index.php 2010-11-08 03:01:59 UTC (rev 398) @@ -52,7 +52,8 @@ on <code>irc.oftc.net</code> provides a more interactive way for such discussions. Our Einstein Toolkit <a href="http://blog.einsteintoolkit.org/">blog</a> provides - more content, and anyone can sign up to post to it. + more content, and anyone can sign up to post to it. Please follow the + <a href="support/index.php">Support</a> link for more details. </p> <?php include_once($_SERVER['DOCUMENT_ROOT'].'/global/footer.php');?>

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[svn:einsteintoolkit] www/info/resources/ (Rev. 397)
by bcmsma＠astro.rit.edu 07 Nov '10

07 Nov '10

User: bmundim Date: 2010/11/07 08:55 PM Modified: /info/resources/ index.php Log: Fix broken link. Can someone confirm this configuration is actually used on Queen Bee? File Changes: Directory: /info/resources/ =========================== File [modified]: index.php Delta lines: +1 -1 =================================================================== --- info/resources/index.php 2010-11-08 02:40:08 UTC (rev 396) +++ info/resources/index.php 2010-11-08 02:55:59 UTC (rev 397) @@ -35,7 +35,7 @@ <td><a href="http://www.ncsa.illinois.edu/UserInfo/Resources/Hardware/Intel64Cluster/">Abe</a> (<a href="https://svn.cct.lsu.edu/repos/numrel/simfactory/optionlists/abe-mvapich2.cfg">config</a>)<br> <a href="http://www.nics.tennessee.edu/computing-resources/kraken">Kraken</a> (<a href="https://svn.cct.lsu.edu/repos/numrel/simfactory/optionlists/kraken.cfg">config</a>)<br> <a href="http://services.tacc.utexas.edu/index.php/ranger-user-guide">Ranger</a> (<a href="https://svn.cct.lsu.edu/repos/numrel/simfactory/optionlists/ranger-mvapich.…">config</a>)<br> -<a href="http://www.loni.org/systems/system.php?system=QueenBee">Queen Bee</a> (<a href="https://svn.cct.lsu.edu/repos/numrel/simfactory/optionlists/eric-mvapich2.c…">config</a>) +<a href="http://www.loni.org/systems/system.php?system=QueenBee">Queen Bee</a> (<a href="https://svn.cct.lsu.edu/repos/numrel/simfactory/optionlists/queenbee-mvapic…">config</a>) </td> </tr> </table>

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[svn:einsteintoolkit] www/info/ (Rev. 396)
by bcmsma＠astro.rit.edu 07 Nov '10

07 Nov '10

User: bmundim Date: 2010/11/07 08:40 PM Modified: /info/ citation.php Log: Spelling out e.g. File Changes: Directory: /info/ ================= File [modified]: citation.php Delta lines: +3 -4 =================================================================== --- info/citation.php 2010-11-08 02:21:26 UTC (rev 395) +++ info/citation.php 2010-11-08 02:40:08 UTC (rev 396) @@ -21,10 +21,9 @@ <li> Authors are <b>requested</b> to individually cite publications for identified key software components from the toolkit that are used to - obtain published results. These publications include details of e.g. the equations, algorithm, -and verification of components. -A list of components for which this applies -is provided below. +obtain published results. These publications include, for example, details +of the equations, algorithms, and verification of components. +A list of components for which this applies is provided below. <li> Authors should consult the full publication page for the Einstein Toolkit (not yet in place) to determine if in their judgement it would be

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