[svn:einsteintoolkit] www/publications/2013_MHD/ (Rev. 1006) - Commits

11 May 2013

User: rhaas
Date: 2013/05/11 01:53 AM
Modified:
 /publications/2013_MHD/
  einsteintoolkit_plus_zelmani.th, index.php
 /publications/2013_MHD/par/collapse/
  A3_oct.par, A3_oct_64.par, A3_oct_80.par
Log:
 update parfiles and thorn list for mhd paper
File Changes:
Directory: /publications/2013_MHD/
==================================
File [modified]: einsteintoolkit_plus_zelmani.th
Delta lines: +4 -3
===================================================================

--- publications/2013_MHD/einsteintoolkit_plus_zelmani.th	2013-05-08 00:01:40 UTC (rev 1005)
+++ publications/2013_MHD/einsteintoolkit_plus_zelmani.th	2013-05-11 06:53:06 UTC (rev 1006)
@@ -402,9 +402,10 @@
# Private thorns
-!TARGET   = $ARR/Zelmani
-!TYPE     = http
-!URL      = http://www.tapir.caltech.edu/~rhaas/ET/2013_MHD/
+!TARGET   = $ARR
+!TYPE     = svn
+!AUTH_URL = https://svn.einsteintoolkit.org/incoming/$2
+!URL      = http://svn.einsteintoolkit.org/incoming/$2
 !CHECKOUT = 
 Zelmani/CartesianCoordinates
 Zelmani/ZelmaniQuadWaveExtract
File [modified]: index.php
Delta lines: +4 -4
===================================================================
--- publications/2013_MHD/index.php	2013-05-08 00:01:40 UTC (rev 1005)
+++ publications/2013_MHD/index.php	2013-05-11 06:53:06 UTC (rev 1006)
@@ -166,10 +166,10 @@
   <a href="par/collapse/A3_oct_80.par">A3_oct_80.par</a>
   </td></tr>
   <tr><th>thornlist</th><td><a href="einsteintoolkit_plus_zelmani.th">Einstein Toolkit 2013_05 release + selected Zelmani</a></td></tr>
-  <tr><th>Initial data checkpoints </th><td>
-  <a href="ID/collapse/ID_A3_oct.tar.gz">ID_A3_oct.tar.gz</a>
-  <a href="ID/collapse/ID_A3_oct_64.tar.gz">ID_A3_oct_64.tar.gz</a>
-  <a href="ID/collapse/ID_A3_oct_80.tar.gz">ID_A3_oct_80.tar.gz</a>
+  <tr><th>Initial data</th><td>
+  <a href="http://www.tapir.caltech.edu/~rhaas/ET/2013_MHD/collapse/ID_A3_octh5.xz">ID_A3_oct.h5.xz (221Mb)</a>
+  <a href="http://www.tapir.caltech.edu/~rhaas/ET/2013_MHD/collapse/ID_A3_oct_64.h5.xz">ID_A3_oct_64.h5.xz (388Mb)</a>
+  <a href="http://www.tapir.caltech.edu/~rhaas/ET/2013_MHD/collapse/ID_A3_oct_80.h5.xz">ID_A3_oct_80.h5.xz (747Mb)</a>
   </td></tr>
   <tr><th>CPU time </th><td>x SU</td></tr>
   <tr><th>memory   </th><td>x GB</td></tr>
Directory: /publications/2013_MHD/par/collapse/
===============================================
File [modified]: A3_oct.par
Delta lines: +26 -30
===================================================================
--- publications/2013_MHD/par/collapse/A3_oct.par	2013-05-08 00:01:40 UTC (rev 1005)
+++ publications/2013_MHD/par/collapse/A3_oct.par	2013-05-11 06:53:06 UTC (rev 1006)
@@ -47,7 +47,8 @@
    	eos_omni
    	Formaline
    	ZelmaniQuadWaveExtract
-		Whisky_RNSID
+#		Whisky_RNSID
+                IDFileADM
    	ReflectionSymmetry
    	RotatingSymmetry90
 "
@@ -622,37 +623,32 @@
########################### Initial Data ##############################
-admbase::initial_data				=	"rnsid"
-admbase::initial_lapse				=	"rnsid"
-admbase::initial_shift				=	"rnsid"
+## if you have Whisky_RNSID you can create initial data using these options
+#admbase::initial_data				=	"rnsid"
+#admbase::initial_lapse				=	"rnsid"
+#admbase::initial_shift				=	"rnsid"
+#HydroBase::initial_hydro			=	"rnsid"
+#
+#rnsid::axes_ratio                               =       0.667         # 0.917 
+#rnsid::accuracy                                 =       1e-7
+#rnsid::rotation_type                            =       "uniform"       # ok
+#
+#rnsid::RNS_Gamma                                =       1.33333333333333 # ok
+#rnsid::RNS_K                                    =       0.4640517        # 5E14 [cgs]
+#
+#rnsid::recover_2Dmodel                          =       "no"
+#rnsid::save_2Dmodel                             =       "no"
+#
+#rnsid::mdiv                                     =       601
+#rnsid::sdiv                                     =       1201
-#rnsid::radius                                   =       1628         # 0.917 
-rnsid::axes_ratio                               =       0.667         # 0.917 
-rnsid::accuracy                                 =       1e-7
-#rnsid::A_diff                                   =       0.5 
-#rnsid::A_diff                                   =       0.317320341
-rnsid::rotation_type                            =       "uniform"       # ok
+admbase::initial_data                            = "read from file"
+admbase::initial_lapse                           = "read from file"
+admbase::initial_shift                           = "read from file"
+HydroBase::initial_hydro                         = "read from file" # ignored by file reader
+IO::filereader_ID_dir                            = "$ENV{INITIAL_DATA}/rnsid"
+IO::filereader_ID_files                          = "ID_A3_oct_80"
-rnsid::RNS_Gamma                                =       1.33333333333333 # ok
-rnsid::RNS_K                                    =       0.4640517        # 5E14 [cgs]
-
-rnsid::recover_2Dmodel                          =       "no"
-rnsid::save_2Dmodel                             =       "no"
-
-rnsid::mdiv                                     =       601
-rnsid::sdiv                                     =       1201
-
-#eos_omni::poly_gamma                            = 1.31
-#eos_omni::poly_gamma_ini                        = 1.333333333333333333
-#eos_omni::poly_k                                = 0.4640517
-#eos_omni::gl_gamma                              = 1.31
-#eos_omni::gl_k                                  = 0.4640517
-#eos_omni::hybrid_gamma1                         = 1.31
-#eos_omni::hybrid_gamma2                         = 2.5
-#eos_omni::hybrid_gamma_th                       = 1.5
-#eos_omni::hybrid_k1                             = 0.4640517
-#eos_omni::hybrid_rho_nuc                        = 3.238607e-4
-
 eos_omni::poly_gamma                            = 1.3
 eos_omni::poly_k                                = 0.4640517
 eos_omni::gl_gamma                              = 1.3
File [modified]: A3_oct_64.par
Delta lines: +26 -36
===================================================================
--- publications/2013_MHD/par/collapse/A3_oct_64.par	2013-05-08 00:01:40 UTC (rev 1005)
+++ publications/2013_MHD/par/collapse/A3_oct_64.par	2013-05-11 06:53:06 UTC (rev 1006)
@@ -47,7 +47,8 @@
    	eos_omni
    	Formaline
    	ZelmaniQuadWaveExtract
-		Whisky_RNSID
+#		Whisky_RNSID
+                IDFileADM
    	ReflectionSymmetry
    	RotatingSymmetry90
 "
@@ -622,37 +623,32 @@
########################### Initial Data ##############################
-admbase::initial_data				=	"rnsid"
-admbase::initial_lapse				=	"rnsid"
-admbase::initial_shift				=	"rnsid"
+## if you have Whisky_RNSID you can create initial data using these options
+#admbase::initial_data				=	"rnsid"
+#admbase::initial_lapse				=	"rnsid"
+#admbase::initial_shift				=	"rnsid"
+#HydroBase::initial_hydro			=	"rnsid"
+#
+#rnsid::axes_ratio                               =       0.667         # 0.917 
+#rnsid::accuracy                                 =       1e-7
+#rnsid::rotation_type                            =       "uniform"       # ok
+#
+#rnsid::RNS_Gamma                                =       1.33333333333333 # ok
+#rnsid::RNS_K                                    =       0.4640517        # 5E14 [cgs]
+#
+#rnsid::recover_2Dmodel                          =       "no"
+#rnsid::save_2Dmodel                             =       "no"
+#
+#rnsid::mdiv                                     =       601
+#rnsid::sdiv                                     =       1201
-#rnsid::radius                                   =       1628         # 0.917 
-rnsid::axes_ratio                               =       0.667         # 0.917 
-rnsid::accuracy                                 =       1e-7
-#rnsid::A_diff                                   =       0.5 
-#rnsid::A_diff                                   =       0.317320341
-rnsid::rotation_type                            =       "uniform"       # ok
+admbase::initial_data                            = "read from file"
+admbase::initial_lapse                           = "read from file"
+admbase::initial_shift                           = "read from file"
+HydroBase::initial_hydro                         = "read from file" # ignored by file reader
+IO::filereader_ID_dir                            = "$ENV{INITIAL_DATA}/rnsid"
+IO::filereader_ID_files                          = "ID_A3_oct_80"
-rnsid::RNS_Gamma                                =       1.33333333333333 # ok
-rnsid::RNS_K                                    =       0.4640517        # 5E14 [cgs]
-
-rnsid::recover_2Dmodel                          =       "no"
-rnsid::save_2Dmodel                             =       "no"
-
-rnsid::mdiv                                     =       601
-rnsid::sdiv                                     =       1201
-
-#eos_omni::poly_gamma                            = 1.31
-#eos_omni::poly_gamma_ini                        = 1.333333333333333333
-#eos_omni::poly_k                                = 0.4640517
-#eos_omni::gl_gamma                              = 1.31
-#eos_omni::gl_k                                  = 0.4640517
-#eos_omni::hybrid_gamma1                         = 1.31
-#eos_omni::hybrid_gamma2                         = 2.5
-#eos_omni::hybrid_gamma_th                       = 1.5
-#eos_omni::hybrid_k1                             = 0.4640517
-#eos_omni::hybrid_rho_nuc                        = 3.238607e-4
-
 eos_omni::poly_gamma                            = 1.3
 eos_omni::poly_k                                = 0.4640517
 eos_omni::gl_gamma                              = 1.3
@@ -722,11 +718,5 @@
-#ccccglobalmodes::do_CoM         = yes
-#ccccglobalmodes::cut_method     = radius
-##ccccglobalmodes::radius_cut     = 500
-#ccccglobalmodes::CoM_radius     = 1500
-#CCCCGlobalModes::compute_every = 128
-
 ZelmaniQuadWaveExtract::integrand_type = "shibata"
 ZelmaniQuadWaveExtract::compute_every = 32
File [modified]: A3_oct_80.par
Delta lines: +26 -30
===================================================================
--- publications/2013_MHD/par/collapse/A3_oct_80.par	2013-05-08 00:01:40 UTC (rev 1005)
+++ publications/2013_MHD/par/collapse/A3_oct_80.par	2013-05-11 06:53:06 UTC (rev 1006)
@@ -47,7 +47,8 @@
    	eos_omni
    	Formaline
    	ZelmaniQuadWaveExtract
-		Whisky_RNSID
+#		Whisky_RNSID
+                IDFileADM
    	ReflectionSymmetry
    	RotatingSymmetry90
 "
@@ -622,37 +623,32 @@
########################### Initial Data ##############################
-admbase::initial_data				=	"rnsid"
-admbase::initial_lapse				=	"rnsid"
-admbase::initial_shift				=	"rnsid"
+## if you have Whisky_RNSID you can create initial data using these options
+#admbase::initial_data				=	"rnsid"
+#admbase::initial_lapse				=	"rnsid"
+#admbase::initial_shift				=	"rnsid"
+#HydroBase::initial_hydro			=	"rnsid"
+#
+#rnsid::axes_ratio                               =       0.667         # 0.917 
+#rnsid::accuracy                                 =       1e-7
+#rnsid::rotation_type                            =       "uniform"       # ok
+#
+#rnsid::RNS_Gamma                                =       1.33333333333333 # ok
+#rnsid::RNS_K                                    =       0.4640517        # 5E14 [cgs]
+#
+#rnsid::recover_2Dmodel                          =       "no"
+#rnsid::save_2Dmodel                             =       "no"
+#
+#rnsid::mdiv                                     =       601
+#rnsid::sdiv                                     =       1201
-#rnsid::radius                                   =       1628         # 0.917 
-rnsid::axes_ratio                               =       0.667         # 0.917 
-rnsid::accuracy                                 =       1e-7
-#rnsid::A_diff                                   =       0.5 
-#rnsid::A_diff                                   =       0.317320341
-rnsid::rotation_type                            =       "uniform"       # ok
+admbase::initial_data                            = "read from file"
+admbase::initial_lapse                           = "read from file"
+admbase::initial_shift                           = "read from file"
+HydroBase::initial_hydro                         = "read from file" # ignored by file reader
+IO::filereader_ID_dir                            = "$ENV{INITIAL_DATA}/rnsid"
+IO::filereader_ID_files                          = "ID_A3_oct_80"
-rnsid::RNS_Gamma                                =       1.33333333333333 # ok
-rnsid::RNS_K                                    =       0.4640517        # 5E14 [cgs]
-
-rnsid::recover_2Dmodel                          =       "no"
-rnsid::save_2Dmodel                             =       "no"
-
-rnsid::mdiv                                     =       601
-rnsid::sdiv                                     =       1201
-
-#eos_omni::poly_gamma                            = 1.31
-#eos_omni::poly_gamma_ini                        = 1.333333333333333333
-#eos_omni::poly_k                                = 0.4640517
-#eos_omni::gl_gamma                              = 1.31
-#eos_omni::gl_k                                  = 0.4640517
-#eos_omni::hybrid_gamma1                         = 1.31
-#eos_omni::hybrid_gamma2                         = 2.5
-#eos_omni::hybrid_gamma_th                       = 1.5
-#eos_omni::hybrid_k1                             = 0.4640517
-#eos_omni::hybrid_rho_nuc                        = 3.238607e-4
-
 eos_omni::poly_gamma                            = 1.3
 eos_omni::poly_k                                = 0.4640517
 eos_omni::gl_gamma                              = 1.3

    