Commits April 2011

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208 discussions

[svn:einsteintoolkit] manifest/trunk/ (Rev. 86)
by bcmsma＠astro.rit.edu 17 Apr '11

17 Apr '11

User: bmundim Date: 2011/04/17 11:30 PM Modified: /trunk/ einsteintoolkit.bib Log: Review on hydro tests. File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.bib Delta lines: +12 -0 =================================================================== --- trunk/einsteintoolkit.bib 2011-04-18 03:59:46 UTC (rev 85) +++ trunk/einsteintoolkit.bib 2011-04-18 04:30:27 UTC (rev 86) @@ -837,6 +837,18 @@ pages = {3794-3801} } +@Article{Marti:1999wi, + author = "Mart{\'i}, Jos{\'e} M. and M{\"u}ller, Ewald", + title = "{Numerical hydrodynamics in special relativity}", + journal = "Living Rev. Rel.", + volume = "2", + year = "1999", + pages = "3", + eprint = "astro-ph/9906333", + archivePrefix = "arXiv", + SLACcitation = "%%CITATION = ASTRO-PH/9906333;%%" +} + @Misc{McLachlan:web, suggested-for ="McLachlan/ML_BSSN", note = {{McLachlan}, a Public {BSSN} Code},

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[svn:einsteintoolkit] manifest/trunk/ (Rev. 85)
by bcmsma＠astro.rit.edu 17 Apr '11

17 Apr '11

User: bmundim Date: 2011/04/17 10:59 PM Modified: /trunk/ einsteintoolkit.bib Log: Add York's conformal thin-sandwich reference. File Changes: Directory: /trunk/ ================== File [modified]: einsteintoolkit.bib Delta lines: +15 -0 =================================================================== --- trunk/einsteintoolkit.bib 2011-04-12 18:20:32 UTC (rev 84) +++ trunk/einsteintoolkit.bib 2011-04-18 03:59:46 UTC (rev 85) @@ -1054,4 +1054,19 @@ primaryClass = "gr-qc", } +@Article{York:1998hy, + author = "York, Jr. , James W.", + title = "{Conformal 'thin sandwich' data for the initial-value + problem of General Relativity}", + journal = "Phys. Rev. Lett.", + volume = "82", + year = "1999", + pages = "1350-1353", + eprint = "gr-qc/9810051", + archivePrefix = "arXiv", + doi = "10.1103/PhysRevLett.82.1350", + SLACcitation = "%%CITATION = GR-QC/9810051;%%" +} + + ##Z ############################################################################

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[svn:einsteintoolkit] Paper_EinsteinToolkit_2010/ (Rev. 61)
by schnetter＠cct.lsu.edu 17 Apr '11

17 Apr '11

User: eschnett Date: 2011/04/17 09:44 PM Modified: / ET.tex Log: Add to grants File Changes: Directory: / ============ File [modified]: ET.tex Delta lines: +6 -3 =================================================================== --- ET.tex 2011-04-18 02:40:49 UTC (rev 60) +++ ET.tex 2011-04-18 02:44:28 UTC (rev 61) @@ -1465,7 +1465,9 @@ where $S_i=-\frac{1}{\alpha} \left( T_{i0} - \beta^j T_{ij} \right)$. The difference between these modules lies in how they access the stress energy tensor $T_{\mu\nu}$, as the module \codename{ADMConstraints} -uses a \todo{deprecated?} functionality which does not require storage +uses a \todo{deprecated?} +\todo{ES: yes, deprecated} +functionality which does not require storage for $T_{\mu\nu}$. Finally, \codename{ADMAnalysis} calculates a variety of derived spacetime @@ -1798,9 +1800,10 @@ Results presented in this article were obtained through computations on the Louisiana Optical Network Initiative under allocation loni\_cactus05, as well as the NSF Teragrid -under allocation TG-MCA02N014 \todo{DOE, HLRB, LRZ, Sharcnet}. +under allocation TG-MCA02N014 \todo{DOE repository m152, + HLRB, LRZ, Sharcnet project + project cfz-411-aa}. - \bibliographystyle{amsplain-url} \bibliography{manifest/einsteintoolkit,local_bibtex/ott_references,local_bibtex/references}

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[svn:einsteintoolkit] Paper_EinsteinToolkit_2010/ (Rev. 60)
by schnetter＠cct.lsu.edu 17 Apr '11

17 Apr '11

User: eschnett Date: 2011/04/17 09:40 PM Modified: / ET.tex Log: Update QLM section File Changes: Directory: / ============ File [modified]: ET.tex Delta lines: +17 -6 =================================================================== --- ET.tex 2011-04-18 02:30:45 UTC (rev 59) +++ ET.tex 2011-04-18 02:40:49 UTC (rev 60) @@ -1325,16 +1325,27 @@ the domain as these quantities are only properly interpretable when calculated at infinity. -Second, there are the quasi-local measures of mass and momentum. From +Second, there are the quasi-local measures of mass and angular momentum. From any \ahz{s} found during the spacetime, both \codename{AHFinderDirect} and \codename{AHFinder} output the corresponding mass derived from the area of the horizon $m_H = -\sqrt{A/(16\pi)}$. In addition, the module \codename{QuasiLocalMeasures} -takes a specified surface, generally a previously located \ahz{} -and calculates the mass, spin and their moments, among other quantities, -on the surface based on the isolated and dynamical horizon framework. -\todo{... is this what it does? ...} +\sqrt{A/(16\pi)}$. +In addition, the module \codename{QuasiLocalMeasures} implements +certain equations from the isolated and dynamical horizon formalisms, +as well as certain extensions defining quasi-local quantities; +quasi-local quantities are quantities that are gauge independent, but +depend on the choice of a particular two-sphere in a spacetime. In +this sense, \codename{QuasiLocalMeasures} can provide +gauge-independent measures of e.g.\ mass and angular momentum of +regions of the spacetime enclosed in a two-sphere. +\codename{QuasiLocalMeasures} takes as input a horizon surface any +other surface that the user specifies, such as a large coordinate +sphere, and calculates can calculate mass, angular momentum, or other +quantities such as the Weyl or Ricci scalars, multipole moments of the +horizon geometry, or the three-volume element of the horizon world +tube. + Finally, the module \codename{HydroAnalysis} additionally locates the center of mass as well as the point of maximum rest mass density of a matter field.

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[svn:einsteintoolkit] Paper_EinsteinToolkit_2010/ (Rev. 59)
by schnetter＠cct.lsu.edu 17 Apr '11

17 Apr '11

User: eschnett Date: 2011/04/17 09:30 PM Modified: / ET.tex Log: Add pointer to Carpet publication File Changes: Directory: / ============ File [modified]: ET.tex Delta lines: +2 -1 =================================================================== --- ET.tex 2011-04-18 02:29:22 UTC (rev 58) +++ ET.tex 2011-04-18 02:30:45 UTC (rev 59) @@ -427,7 +427,8 @@ are applied automatically as specified in the execution schedule, i.e.\ without requiring function calls in user code. Figure \ref{fig:carpet-details} describes some details of the -Berger-Oliger time stepping algorithm. +Berger-Oliger time stepping algorithm. More details are described in +\ref{Schnetter:2003rb}. \begin{figure} \centering

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[svn:einsteintoolkit] Paper_EinsteinToolkit_2010/ (Rev. 58)
by schnetter＠cct.lsu.edu 17 Apr '11

17 Apr '11

User: eschnett Date: 2011/04/17 09:29 PM Added: /figures/ carpet-interpolation.pdf, carpet-timestepping.pdf Modified: / ET.tex /local_bibtex/ references.bib Log: Update Carpet and Simulation Factory sections. Directory Changes: Directory: /svn:mime-type/ ========================== + application/octet-stream File Changes: Directory: / ============ File [modified]: ET.tex Delta lines: +57 -16 =================================================================== --- ET.tex 2011-04-12 18:15:09 UTC (rev 57) +++ ET.tex 2011-04-18 02:29:22 UTC (rev 58) @@ -391,13 +391,14 @@ The Einstein Toolkit offers two drivers, \emph{PUGH} and \emph{Carpet}. PUGH provides domains consisting of a uniform grid with Cartesian topology, and is highly scalable (up to more than -130,000 cores on a Blue -Gene/P \todo{cite}). Carpet \cite{Schnetter:2003rb, Schnetter:2006pg, +130,000 cores on a Blue Gene/P \cite{Cactuscode:BlueGene}.) +Carpet \cite{Schnetter:2003rb, Schnetter:2006pg, CarpetCode:web} provides multi-block methods and adaptive mesh refinement (AMR\@). Multi-block methods cover the domain with a set of (possibly distorted) blocks that exchange boundary information e.g.\ via interpolation or penalty methods.\footnote{Although multi-block - methods are supported by Carpet, the Einstein Toolkit does not yet + methods are supported by Carpet, the Einstein Toolkit itself + does not yet contain any multi-block coordinate systems.} The AMR capabilities employ the standard Berger-Oliger algorithm \cite{Berger84} with subcycling in time. @@ -425,9 +426,24 @@ interpolation operations are implemented efficiently in Carpet, and are applied automatically as specified in the execution schedule, i.e.\ without requiring function calls in user code. +Figure \ref{fig:carpet-details} describes some details of the +Berger-Oliger time stepping algorithm. -\todo{ES: Add figure from Carpet paper explaining subcycling in time.} -\todo{ES: Add figure showing a grid structure} +\begin{figure} + \centering + \includegraphics[width=0.45\textwidth]{figures/carpet-timestepping} + \hfill + \includegraphics[width=0.45\textwidth]{figures/carpet-interpolation} + \caption{Berger-Oliger time stepping details, showing a coarse and a + fine grid; time moves upwards. \textbf{Left:} Time stepping + algorithm. First the coarse takes a large time step, then the + refined grid takes two smaller steps. Then, the fine grid solution + is injected into the coarse grid where the grids overlap. + \textbf{Right:} Fine grid boundary conditions. The boundary points + of the refined grids are filled via interpolation. This may + require interpolation in space and in time.} + \label{fig:carpet-details} +\end{figure} Carpet is the main driver used today for Cactus-based astrophysical simulations. Carpet offers hybrid MPI/OpenMP parallelisation and is @@ -476,10 +492,31 @@ The Simulation Factory supports and simplifies three kinds of operations: \begin{description} -\item[Remote Access] \todo{ES} -\item[Configuring and Building] \todo{ES} -\item[Submitting and Managing Simulations] \todo{ES} +\item[Remote Access] The actual access commands and authentication + methods differ between systems, as do the user names that a person + has on different systems. In addition, some systems are not directly + accessible, but one has to log in to a particular ``trampoline'' + server first. The Simulation Factory hides this complexity. +\item[Configuring and Building] Building Cactus requires certain + software on the system, such as compilers, libraries, or build + tools. Many systems offer different version of these, which may also + be installed in non-default locations. Finding a working combination + of these that results in efficient code is very tedious and requires + low-level system experience. The Simulation Factory provides a + \emph{machine database} that enables users to store and exchange + this information. In many cases, this allows people to begin to use + a new machine in a very short time and with just a few, simple + commands. +\item[Submitting and Managing Simulations] Many simulations run for + days or weeks, requiring frequent checkpointing and job + re-submission because of short queue run time limits. Simple user + errors in these menial tasks can potentially destroy weeks of + information. The Simulation Factory offers safe commands that + encapsulate best practices that prevent many common errors and leave + a log trail. \end{description} +The above features make running simulations on supercomputers much +safer and simpler. \subsection{Kranc\pages{1 Ian}} \label{sec:kranc} @@ -779,9 +816,9 @@ method to achieve rapid solutions. \begin{figure} - \label{fig:TP_BHNS_coordinates} \centering\includegraphics[width=0.5\textwidth]{TwoPunctures_grid_BHNS}\\ \caption{Example of a TwoPunctures coordinate system for BH-NS binary initial data} + \label{fig:TP_BHNS_coordinates} \end{figure} \subsubsection{Lorene-based binary data} @@ -814,10 +851,10 @@ at every point. \begin{figure} - \label{fig:Lorene_coordinates} \centering\includegraphics[width=0.5\textwidth]{Lorene_Grid}\\ \caption{Example of a Lorene multi-domain coordinate system for binary initial data. The outermost, compactified domain extending to spatial infinity is not shown.} + \label{fig:Lorene_coordinates} \end{figure} \codename{Meudon\_Bin\_BH} can read in binary black hole @@ -836,7 +873,7 @@ \subsubsection{TOVSolver} -\subsection{Equation of States}\pages{1 Christian} +\subsection{Equations of States}\pages{1 Christian} \subsection{Spacetime Curvature and Hydrodynamics Evolution} \todo{Christian in charge} @@ -1535,12 +1572,16 @@ \begin{center} \includegraphics{faces} \end{center} - \caption{Recursive transformation of a point $x$ in quadrant 3 to a the - physical point $x''$ for which there is actual data stored. In this - example two reflection symmetries along the horizontal and vertical axis - are present, notice how the vector components are transformed in + \caption{Iterative transformation of a point $x$ in quadrant 3 to the + corresponding + point $x''$ for which there is actual data stored. In this + example, two reflection symmetries along the horizontal and vertical axis + are present. notice how the vector components change in transformations $A$ and $B$. Image courtesy of Erik Schnetter\todo{RH: - Erik, are you ok with this paper re-using your image from SymBase?}} + Erik, are you ok with this paper re-using your image from + SymBase?}\todo{ES: Yes, I think using figures from the Cactus + users' guide is fine. However, this particular image is not from + me.}} \label{fig:faces} \end{figure} Thorn \codename{Boundary} provides basic boundary conditions. A boundary Directory: /figures/ ==================== File [added]: carpet-interpolation.pdf Delta lines: +0 -0 =================================================================== (Binary files differ) Property changes on: figures/carpet-interpolation.pdf ___________________________________________________________________ File [added]: carpet-timestepping.pdf Delta lines: +0 -0 =================================================================== (Binary files differ) Property changes on: figures/carpet-timestepping.pdf ___________________________________________________________________ Directory: /local_bibtex/ ========================= File [modified]: references.bib Delta lines: +5 -0 =================================================================== --- local_bibtex/references.bib 2011-04-12 18:15:09 UTC (rev 57) +++ local_bibtex/references.bib 2011-04-18 02:29:22 UTC (rev 58) @@ -29345,3 +29345,8 @@ publisher = {Springer-Verlag}, address = {Berlin, Heidelberg}, } + +@Misc{Cactuscode:BlueGene, + note = {Cactus runs on 131,072 cores on Blue Gene/P at ANL}, + url = {http://cactuscode.org/media/news/BGP-131072/}, +}

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[svn:einsteintoolkit] www/release-info/ (Rev. 548)
by schnetter＠cct.lsu.edu 17 Apr '11

17 Apr '11

User: eschnett Date: 2011/04/17 05:40 PM Modified: /release-info/ redshift__1_1.log, redshift__2_2.log Log: Update Redshift results File Changes: Directory: /release-info/ ========================= File [modified]: redshift__1_1.log Delta lines: +10 -9 =================================================================== --- release-info/redshift__1_1.log 2011-04-17 04:46:51 UTC (rev 547) +++ release-info/redshift__1_1.log 2011-04-17 22:40:05 UTC (rev 548) @@ -798,13 +798,13 @@ AHFinderDirect: Kerr-rotating-90 Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-selection-areal-radius - Success: 2 files compared, 2 differ in the last digits + Success: 2 files compared, 1 differ in the last digits AHFinderDirect: Kerr-selection-areal-radius-definition-expansion-product Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-selection-mean-coordinate-radius - Success: 2 files compared, 2 differ in the last digits + Success: 2 files compared, 1 differ in the last digits AHFinderDirect: checkpointML - Success: 7 files compared, 7 differ in the last digits + Success: 7 files compared, 3 differ in the last digits AHFinderDirect: misner1.2-025 Success: 55 files compared, 8 differ in the last digits AHFinderDirect: recoverML @@ -820,7 +820,7 @@ DistortedBHIVP: E2xeon_test_dbh Failure: 100 files compared, 44 differ, 4 differ significantly Exact: Schwarzschild_EF - Failure: 112 files compared, 27 differ, 27 differ significantly + Failure: 112 files compared, 42 differ, 42 differ significantly Exact: bowl-evolution Success: 24 files identical Exact: bowl-init @@ -1020,14 +1020,14 @@ WeylScal4: teukolsky Success: 8 files compared, 6 differ in the last digits WeylScal4: teukolskyID - Success: 8 files compared, 6 differ in the last digits + Failure: 8 files missing, 0 files compared, 0 differ ======================================================================== Summary for configuration sim - Time -> Fri Apr 8 18:13:26 EDT 2011 + Time -> Sun Apr 17 17:55:11 EDT 2011 Host -> erik-schnetters-macbook-pro.local User -> eschnett @@ -1036,10 +1036,10 @@ Runnable tests -> 131 Total number of thorns -> 163 Number of tested thorns -> 39 - Number of tests passed -> 127 + Number of tests passed -> 126 Number passed only to - set tolerance -> 80 - Number failed -> 4 + set tolerance -> 79 + Number failed -> 5 Tests failed: @@ -1047,6 +1047,7 @@ Schwarzschild_EF (from Exact) x_flip_pugh_ppm (from Hydro_InitExcision) test_axibrill_nostagger (from IDAxiBrillBH) + teukolskyID (from WeylScal4) ======================================================================== File [modified]: redshift__2_2.log Delta lines: +34 -46 =================================================================== --- release-info/redshift__2_2.log 2011-04-17 04:46:51 UTC (rev 547) +++ release-info/redshift__2_2.log 2011-04-17 22:40:05 UTC (rev 548) @@ -154,6 +154,18 @@ Tests missed for different number of processors required: + checkpointML in AHFinderDirect + (EinsteinAnalysis/AHFinderDirect/test/checkpointML.par) + Requires 1 processors + + misner1.2-025 in AHFinderDirect + (EinsteinAnalysis/AHFinderDirect/test/misner1.2-025.par) + Requires 1 processors + + recoverML in AHFinderDirect + (EinsteinAnalysis/AHFinderDirect/test/recoverML.par) + Requires 1 processors + CarpetWaveToyNewRecover_test_1proc in CarpetIOHDF5 (Carpet/CarpetIOHDF5/test/CarpetWaveToyNewRecover_test_1proc.par) Requires 1 processors @@ -222,7 +234,7 @@ AHFinder [2] - AHFinderDirect [15] + AHFinderDirect [12] DistortedBHIVP [1] @@ -349,12 +361,6 @@ Kerr-selection-mean-coordinate-radius - checkpointML - - misner1.2-025 - - recoverML - DistortedBHIVP: E2xeon_test_dbh @@ -785,39 +791,33 @@ AHFinder: test_AHF_2 Success: 12 files identical AHFinderDirect: Kerr - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-Cartoon Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-definition-expansion - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-definition-expansion-product - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-definition-inner-expansion - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-definition-mean-curvature - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 1 differ in the last digits AHFinderDirect: Kerr-modification-radius - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 1 differ in the last digits AHFinderDirect: Kerr-rotating-180 - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-rotating-90 Success: 2 files compared, 2 differ in the last digits AHFinderDirect: Kerr-selection-areal-radius - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 1 differ in the last digits AHFinderDirect: Kerr-selection-areal-radius-definition-expansion-product - Failure: 2 files compared, 2 differ, 2 differ significantly + Success: 2 files compared, 1 differ in the last digits AHFinderDirect: Kerr-selection-mean-coordinate-radius - Failure: 2 files compared, 2 differ, 2 differ significantly - AHFinderDirect: checkpointML - Failure: 7 files compared, 7 differ, 7 differ significantly - AHFinderDirect: misner1.2-025 - Failure: 55 files compared, 9 differ, 2 differ significantly - AHFinderDirect: recoverML - Failure: 5 files compared, 5 differ, 5 differ significantly + Success: 2 files compared, 1 differ in the last digits DistortedBHIVP: E2xeon_test_dbh Failure: 100 files compared, 44 differ, 4 differ significantly Exact: Schwarzschild_EF - Failure: 112 files compared, 27 differ, 27 differ significantly + Failure: 112 files compared, 42 differ, 42 differ significantly Exact: bowl-evolution Success: 24 files identical Exact: bowl-init @@ -831,11 +831,11 @@ GRHydro: GRHydro_test_shock_ppm Success: 48 files compared, 20 differ in the last digits GRHydro: GRHydro_test_tov_ppm_ML - Success: 180 files compared, 55 differ in the last digits + Success: 180 files compared, 54 differ in the last digits GRHydro: GRHydro_test_tov_ppm_ML_disable_internal_excision Success: 180 files compared, 54 differ in the last digits GRHydro: GRHydro_test_tov_ppm_no_trp_ML - Success: 180 files compared, 54 differ in the last digits + Success: 180 files compared, 52 differ in the last digits Hydro_InitExcision: diag_flip_pugh_eno Success: 72 files compared, 58 differ in the last digits Hydro_InitExcision: diag_flip_pugh_ppm @@ -895,7 +895,7 @@ InterpToArray: wavetoy Success: 25 files compared, 1 differ in the last digits ML_BSSN_Test: gw3d_Exact_ord4_15 - Success: 6 files compared, 6 differ in the last digits + Failure: 6 files compared, 6 differ, 6 differ significantly ML_BSSN_Test: gw3d_McLachlan_ord4_15 Success: 105 files compared, 81 differ in the last digits ML_BSSN_Test: gw3d_McLachlan_ord4_30 @@ -1024,39 +1024,27 @@ Summary for configuration sim - Time -> Fri Apr 8 18:30:31 EDT 2011 + Time -> Sun Apr 17 18:19:58 EDT 2011 Host -> erik-schnetters-macbook-pro.local User -> eschnett Total available tests -> 173 - Unrunnable tests -> 46 - Runnable tests -> 127 + Unrunnable tests -> 49 + Runnable tests -> 124 Total number of thorns -> 163 Number of tested thorns -> 38 - Number of tests passed -> 109 + Number of tests passed -> 118 Number passed only to - set tolerance -> 66 - Number failed -> 18 + set tolerance -> 75 + Number failed -> 6 Tests failed: - Kerr (from AHFinderDirect) - Kerr-definition-expansion (from AHFinderDirect) - Kerr-definition-expansion-product (from AHFinderDirect) - Kerr-definition-inner-expansion (from AHFinderDirect) - Kerr-definition-mean-curvature (from AHFinderDirect) - Kerr-modification-radius (from AHFinderDirect) - Kerr-rotating-180 (from AHFinderDirect) - Kerr-selection-areal-radius (from AHFinderDirect) - Kerr-selection-areal-radius-definition-expansion-product (from AHFinderDirect) - Kerr-selection-mean-coordinate-radius (from AHFinderDirect) - checkpointML (from AHFinderDirect) - misner1.2-025 (from AHFinderDirect) - recoverML (from AHFinderDirect) E2xeon_test_dbh (from DistortedBHIVP) Schwarzschild_EF (from Exact) x_flip_pugh_ppm (from Hydro_InitExcision) test_axibrill_nostagger (from IDAxiBrillBH) + gw3d_Exact_ord4_15 (from ML_BSSN_Test) gw3d_McLachlan_ord4_30 (from ML_BSSN_Test) ========================================================================

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[svn:einsteintoolkit] www/release-info/ (Rev. 547)
by knarf＠cct.lsu.edu 16 Apr '11

16 Apr '11

User: knarf Date: 2011/04/16 11:46 PM Modified: /release-info/ parse_testsuite_results.cgi Log: collapse info for thorns with completely passing testsuites File Changes: Directory: /release-info/ ========================= File [modified]: parse_testsuite_results.cgi Delta lines: +42 -13 =================================================================== --- release-info/parse_testsuite_results.cgi 2011-04-14 11:44:57 UTC (rev 546) +++ release-info/parse_testsuite_results.cgi 2011-04-17 04:46:51 UTC (rev 547) @@ -78,6 +78,10 @@ $results{$thorn}{$test}{$host}{$nprocs}{$nthreads} = (); } $results{$thorn}{$test}{$host}{$nprocs}{$nthreads}{"result"} = $result; + $results{$thorn}{$test}{$host}{$nprocs}{$nthreads}{"success"} = 0; + if ( $result =~ /Success/ ) { + $results{$thorn}{$test}{$host}{$nprocs}{$nthreads}{"success"} = 1; + } $results{$thorn}{$test}{$host}{$nprocs}{$nthreads}{"details"} = $details; } else { print "Not understood: $testline\n"; @@ -88,7 +92,9 @@ # prepare output my %allhosts = (); my %alltests = (); +my %thorn_passed = (); foreach my $thorn (sort(keys(%results))) { + $thorn_passed{$thorn} = 1; if (!defined($alltests{$thorn})) { $alltests{$thorn} = (); } @@ -103,10 +109,19 @@ if (!defined($allhosts{$host}{$nprocs})) { $allhosts{$host}{$nprocs} = (); } - $allhosts{$host}{$nprocs}{$nthreads} = {"success" => 0, - "fail" => 0, - "ran" => 0}; + if (!defined($allhosts{$host}{$nprocs}{$nthreads}{"success"})) { + $allhosts{$host}{$nprocs}{$nthreads} = {"success" => 0, + "fail" => 0, + "ran" => 0}; } + if (!$results{$thorn}{$test}{$host}{$nprocs}{$nthreads}{"success"}) { + $thorn_passed{$thorn} = 0; + $allhosts{$host}{$nprocs}{$nthreads}{"fail"}++; + } else { + $allhosts{$host}{$nprocs}{$nthreads}{"success"}++; + } + $allhosts{$host}{$nprocs}{$nthreads}{"ran"}++; + } } } } @@ -134,9 +149,26 @@ } $table_entries .= "</tr>\n"; +# main table body my $tr = "<tr>"; foreach my $thorn (sort(keys(%alltests))) { my $nr_tests = scalar(keys(%{$alltests{$thorn}})); + # collapse tests of thorns passing all testsuites + if ($thorn_passed{$thorn} and defined($ignore)) { + $table_entries .= "$tr <td>$thorn</td>\n <td>all tests passed ($nr_tests)</td>"; + foreach my $host (sort(keys(%allhosts))) { + foreach my $nprocs (sort(keys(%{$allhosts{$host}}))) { + foreach my $nthreads (sort(keys(%{$allhosts{$host}{$nprocs}}))) { + if (!defined($ignore) or "$nprocs,$nthreads" !~ /$ignore/) { + my $bg = 1; + if ($nprocs != "1") { $bg = 2;} + $table_entries .= "<td class='c$bg'> </td>"; + }}} + } + $table_entries .= "</tr>\n"; $tr="<tr>"; + } + # full info for thorns with failing testsuites + else { $table_entries .= "$tr <td rowspan='$nr_tests'>$thorn</td>\n"; $tr=" "; foreach my $test (sort(keys(%{$alltests{$thorn}}))) { $table_entries .= " $tr<td>$test</td>"; @@ -149,18 +181,14 @@ my $bg = 1; if ($nprocs != "1") { $bg = 2;} # - if (!defined($ignore) or "$nprocs,$nthreads" !~ /$ignore/) - { + if (!defined($ignore) or "$nprocs,$nthreads" !~ /$ignore/) { if (defined($results{$thorn}{$test}{$host}) and defined($results{$thorn}{$test}{$host}{$nprocs}) and defined($results{$thorn}{$test}{$host}{$nprocs}{$nthreads})) { - $allhosts{$host}{$nprocs}{$nthreads}{"ran"}++; my $popup = "$host ${nprocs}p/${nthreads}t"; - if ($results{$thorn}{$test}{$host}{$nprocs}{$nthreads}{"result"} =~ /Success/) { - $allhosts{$host}{$nprocs}{$nthreads}{"success"}++; + if ($results{$thorn}{$test}{$host}{$nprocs}{$nthreads}{"success"}) { $table_entries .= "<td class='c$bg$green'>â$popup</td>"; } else { - $allhosts{$host}{$nprocs}{$nthreads}{"fail"}++; my $details = $results{$thorn}{$test}{$host}{$nprocs}{$nthreads}{"details"}; my $entry = "$details"; if ($details =~ /(\d+) files compared, (\d+) differ, (\d+) differ significantly/) { @@ -180,7 +208,7 @@ } } $table_entries .= "</tr>\n"; $tr="<tr>"; - } + }} } # Things for the top of the table @@ -231,8 +259,9 @@ foreach my $nthreads (sort(keys(%{$allhosts{$host}{$nprocs}}))) { if (!defined($ignore) or "$nprocs,$nthreads" !~ /$ignore/) { - $table_entries_h .= "<td class='c".(($nprocs=="1")?1:2)."'>".$allhosts{$host}{$nprocs}{$nthreads}{"fail"}."/". - $allhosts{$host}{$nprocs}{$nthreads}{"ran"}."</td>"; + $table_entries_h .= "<td class='c".(($nprocs=="1")?1:2)."'>". + $allhosts{$host}{$nprocs}{$nthreads}{"fail"}."/". + $allhosts{$host}{$nprocs}{$nthreads}{"ran"}."</td>"; } } } @@ -293,7 +322,7 @@ CSS print "<a href='parse_testsuite_results.php". (defined($ignore)?"?show_all=1'>Show all":"'>Hide some"). - "</a> process/thread combinations.\n"; + "</a> information.\n"; print "<table border='1'>$table_entries</table>\n";

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[svn:einsteintoolkit] ADMBase/trunk/ (Rev. 59)
by knarf＠cct.lsu.edu 14 Apr '11

14 Apr '11

User: knarf Date: 2011/04/14 09:46 AM Modified: /trunk/ configuration.ccl, interface.ccl, schedule.ccl /trunk/src/ InitSymBound.c Log: Ian Hawke: The point is that no BCs are applied to ADMBase variables, so they're never SYNC'd, so never initialized on refined grids. Ian sent a patch which I extended at bit. File Changes: Directory: /trunk/src/ ====================== File [modified]: InitSymBound.c Delta lines: +36 -0 =================================================================== --- trunk/src/InitSymBound.c 2010-11-21 03:29:06 UTC (rev 58) +++ trunk/src/InitSymBound.c 2011-04-14 14:46:32 UTC (rev 59) @@ -9,6 +9,8 @@ #include "cctk.h" #include "cctk_Arguments.h" +#include "cctk_Parameters.h" +#include "cctk_Functions.h" #include "Symmetry.h" @@ -119,3 +121,37 @@ return; } + +/* A macro for selecting boundary conditions and checking for errors */ +#define ADMBASE_BC(NAME) \ + {if (Boundary_SelectGroupForBC(cctkGH, CCTK_ALL_FACES, 1, -1, NAME, "none") < 0) \ + CCTK_WARN(0, "Failed to register BC for "NAME"!");} +/* Select boundary conditions on ADMBase variables */ +void ADMBase_Boundaries(CCTK_ARGUMENTS) +{ + DECLARE_CCTK_ARGUMENTS; + DECLARE_CCTK_PARAMETERS; + + if (CCTK_EQUALS(evolution_method, "none" ) || + CCTK_EQUALS(evolution_method, "static")) + { + ADMBASE_BC("ADMBase::metric"); + ADMBASE_BC("ADMBase::curv"); + } + + if (CCTK_EQUALS(lapse_evolution_method, "static")) + ADMBASE_BC("ADMBase::lapse"); + + if (!CCTK_EQUALS(initial_dtlapse, "none") && + CCTK_EQUALS(dtlapse_evolution_method, "static")) + ADMBASE_BC("ADMBase::dtlapse"); + + if (!CCTK_EQUALS(initial_shift, "none") && + CCTK_EQUALS(shift_evolution_method, "static")) + ADMBASE_BC("ADMBase::shift"); + + if (!CCTK_EQUALS(initial_dtshift, "none") && + CCTK_EQUALS(dtshift_evolution_method, "static")) + ADMBASE_BC("ADMBase::dtshift"); +} +#undef ADMBase_BC Directory: /trunk/ ================== File [modified]: configuration.ccl Delta lines: +1 -1 =================================================================== --- trunk/configuration.ccl 2010-11-21 03:29:06 UTC (rev 58) +++ trunk/configuration.ccl 2011-04-14 14:46:32 UTC (rev 59) @@ -1,4 +1,4 @@ # Configuration definition for thorn CactusEinstein/ADMBase # $Header$ -REQUIRES CartGrid3D +REQUIRES CartGrid3D Boundary File [modified]: interface.ccl Delta lines: +6 -0 =================================================================== --- trunk/interface.ccl 2010-11-21 03:29:06 UTC (rev 58) +++ trunk/interface.ccl 2011-04-14 14:46:32 UTC (rev 59) @@ -40,3 +40,9 @@ { dtbetax,dtbetay,dtbetaz } "Time derivative of ADM shift function beta^i" + +# Aliased function from thorn Boundary +CCTK_INT FUNCTION Boundary_SelectGroupForBC(CCTK_POINTER_TO_CONST IN GH, \ + CCTK_INT IN faces, CCTK_INT IN boundary_width, CCTK_INT IN table_handle, \ + CCTK_STRING IN group_name, CCTK_STRING IN bc_name) +USES FUNCTION Boundary_SelectGroupForBC File [modified]: schedule.ccl Delta lines: +15 -1 =================================================================== --- trunk/schedule.ccl 2010-11-21 03:29:06 UTC (rev 58) +++ trunk/schedule.ccl 2011-04-14 14:46:32 UTC (rev 59) @@ -227,8 +227,22 @@ OPTIONS: global } "Set up GF symmetries" +# For Mesh Refinement it is possible (eg Cowling approximation) that ADMBase variables will need synchronization even when not evolved (eg when a new refined grid appears) +if (CCTK_Equals(evolution_method, "static") || CCTK_Equals(evolution_method, "none") || CCTK_Equals(lapse_evolution_method, "static") || CCTK_Equals(shift_evolution_method, "static") || CCTK_Equals(dtlapse_evolution_method, "static") || CCTK_Equals(dtshift_evolution_method, "static") ) +{ + SCHEDULE ADMBase_Boundaries IN MoL_PostStep BEFORE ADMBase_SetADMVars + { + LANG: C + OPTIONS: LEVEL + SYNC: lapse + SYNC: dtlapse + SYNC: shift + SYNC: dtshift + SYNC: metric + SYNC: curv + } "Select ADMBase boundary conditions - may be required for mesh refinement" +} - # TODO: Rename this group to "ADMBase_HaveBeenSet"? SCHEDULE GROUP ADMBase_SetADMVars IN MoL_PostStep {

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[svn:einsteintoolkit] www/global/ (Rev. 546)
by roland.haas＠physics.gatech.edu 14 Apr '11

14 Apr '11

User: rhaas Date: 2011/04/14 06:44 AM Modified: /global/ navigation.php Log: re-add support link to navigation bar File Changes: Directory: /global/ =================== File [modified]: navigation.php Delta lines: +1 -0 =================================================================== --- global/navigation.php 2011-04-14 11:04:30 UTC (rev 545) +++ global/navigation.php 2011-04-14 11:44:57 UTC (rev 546) @@ -17,6 +17,7 @@ <li><a href="/community/">Community Services</a> <ul class="subnav"> <li><a href="https://docs.einsteintoolkit.org/et-docs/Main_Page">Wiki</a></li> <li><a href="http://blog.einsteintoolkit.org/">Blog</a></li> + <li><a href="/community/support/">Support</a></li> <li><a href="https://trac.einsteintoolkit.org">Issue Tracker</a></li> </ul></li>

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