Trac November 2024

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106 discussions

#2173: Test "Poisson equation" example
by Lucas Timotheo Sanches 22 Nov '24

22 Nov '24

#2173: Test "Poisson equation" example Reporter: Roland Haas Status: resolved Milestone: ET_2024_11 Version: development version Type: task Priority: major Component: EinsteinToolkit website Changes (by Lucas Timotheo Sanches): status: resolved (was open) Comment (by Lucas Timotheo Sanches): Updated the Poisson gallery example page and datasets for 2024-11 -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2173/test-poisson-equa…

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#2173: Test "Poisson equation" example
by Lucas Timotheo Sanches 22 Nov '24

22 Nov '24

#2173: Test "Poisson equation" example Reporter: Roland Haas Status: open Milestone: ET_2024_11 Version: development version Type: task Priority: major Component: EinsteinToolkit website Comment (by Lucas Timotheo Sanches): Updated the example page and datasets for 2024-11 -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2173/test-poisson-equa…

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#2174: Test "Multi Patch Scalar Wave Equation" example
by Roland Haas 21 Nov '24

21 Nov '24

#2174: Test "Multi Patch Scalar Wave Equation" example Reporter: Roland Haas Status: open Milestone: ET_2024_11 Version: development version Type: task Priority: major Component: EinsteinToolkit website Changes (by Roland Haas): Before each release, check that http://einsteintoolkit.org/gallery/multipatch/index.html still works and produces correct output. **Steps**: 1. download the _development_ version of the Einstein Toolkit: ```shell curl -kLO https://raw.githubusercontent.com/gridaphobe/CRL/master/GetComponents chmod a+x GetComponents ./GetComponents https://bitbucket.org/einsteintoolkit/manifest/raw/master/einsteintoolkit.th ``` 2. download the parameter file fro the gallery example ```shell cd Cactus wget --output-document par/Kerr-Schild_Multipole.par https://bitbucket.org/llamacode/llama/raw/master/LlamaWaveToy/par/Kerr-Schi… ``` 3. compile Cactus for the system you are on \(this may require that you add a cluster allocation etc.\) ```shell ./utils/Scripts/MakeThornList --master thornlists/einsteintoolkit.th --output thornlists/Kerr-Schild_Multipole.th par/Kerr-Schild_Multipole.par ./simfactory/bin/sim setup-silent ./simfactory/bin/sim build --thornlist thornlists/Kerr-Schild_Multipole.th ``` 4. run the simulation, using number of MPI ranks similar to what is shown on the ET website, so _for example_ ```shell ./simfactory/bin/sim create-submit Kerr-Schild_Multipole --parfile par/Kerr-Schild_Multipole.par --cores 8 --num-threads 2 --walltime 0:30:00 ``` 5. on your laptop install VisIt using the precompiled executable available from its [download page](https://visit-dav.github.io/visit-website/) 6. comprehensive instructions on how to produce the images are on the [gallery page](http://einsteintoolkit.org/gallery/multipatch/index.html) **Data to upload** 1. Data is made available at [https://bitbucket.org/einsteintoolkit/www/downloads/](https://bitbucket.org… and you should see a blue “Add Files” button in the top right, when logged in with your Bitbucket account. If that is not the case contact the release manager to have you added. 2. The data file is named Kerr-Schild\_Multipole-YYYYMMDD.tar.gz and should contain the files required to reproduce the plots as well as parameter files, stdout and stderr files and the plot scripts. As of this writing this are the files `u.file_*.h5`, `x.file_*.h5`, `y.file_*.h5`, `z.file_*.h5`, `Kerr-Schild_Multipole.par`, `Kerr-Schild_Multipole.out`, `Kerr-Schild_Multipole.err`, `plot.py`, `Kerr-Schild_Multipole.session`. 3. uploading the file with a browser can be troublesome and fail with no apparent error message. Instead using `curl` and bitbucket’s [REST API ](https://developer.atlassian.com/bitbucket/api/2/reference/resource/repositories/%7Bworkspace%7D/%7Brepo_slug%7D/downloads#post)can be used. 1. If you have enabled TFA for Bitbucket, then you can use an Application password with write permission to the repo. These can be created here: [https://bitbucket.org/account/settings/app-passwords/](https://bitbucket.or… 2. Then run \(replace the file name and the user name and password with the appropriate values\): ```shell curl -u YOURBITBUCKETUSERNAME:YOURBITBUCKETPASSWORD -X POST https://api.bitbucket.org/2.0/repositories/einsteintoolkit/www/downloads -F files=(a)Kerr-Schild_Multipole-YYYYMMDD.tar.gz ``` **Update the webpage** 1. clone the `www` repository to update the gallery page using: ```shell git clone git@bitbucket.org:einsteintoolkit/www.git ``` 2. update the figure files in `gallery/multipatch` with ones you created \(the `kerr_4x3.png` one is used on the ET website frontpage in the “slider” so its aspect ratio must be 4x3\). 3. indicate in `index.html` the date and your name to show when the gallery example was last run 4. update the run time estimates if possible 5. update instructions on the website if they were not clear 6. add, commit and push the changed files to the `www` repository ```shell git add gallery/multipatch/index.html gallery/multipatch/kerr.png gallery/multipatch/kerr_4x3.png git commit -m 'multipatch: update for release ET_YYYY_MM' git push ``` Please report in this ticket any issue you found -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2174/test-multi-patch-…

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#2174: Test "Multi Patch Scalar Wave Equation" example
by Roland Haas 21 Nov '24

21 Nov '24

#2174: Test "Multi Patch Scalar Wave Equation" example Reporter: Roland Haas Status: open Milestone: ET_2024_11 Version: development version Type: task Priority: major Component: EinsteinToolkit website Changes (by Roland Haas): Before each release, check that http://einsteintoolkit.org/gallery/multipatch/index.html still works and produces correct output. **Steps**: 1. download the _development_ version of the Einstein Toolkit: ```shell curl -kLO https://raw.githubusercontent.com/gridaphobe/CRL/master/GetComponents chmod a+x GetComponents ./GetComponents https://bitbucket.org/einsteintoolkit/manifest/raw/master/einsteintoolkit.th ``` 2. download the parameter file fro the gallery example ```shell cd Cactus wget --output-document par/Kerr-Schild_Multipole.par https://bitbucket.org/llamacode/llama/raw/master/LlamaWaveToy/par/Kerr-Schi… ``` 3. compile Cactus for the system you are on \(this may require that you add a cluster allocation etc.\) ```shell ./utils/Scripts/MakeThornList --master thornlists/einsteintoolkit.th --output thornlists/Kerr-Schild_Multipole.th par/Kerr-Schild_Multipole.par ./simfactory/bin/sim setup-silent ./simfactory/bin/sim build --thornlist thornlists/Kerr-Schild_Multipole.th ``` 4. run the simulation, using number of MPI ranks similar to what is shown on the ET website, so _for example_ ```shell ./simfactory/bin/sim create-submit Kerr-Schild_Multipole --parfile par/Kerr-Schild_Multipole.par --cores 8 --num-threads 2 --walltime 0:30:00 ``` 5. on your laptop install VisIt using the precompiled executable available from its [download page](https://visit-dav.github.io/visit-website/) 6. comprehensive instructions on how to produce the images are on the [gallery page](http://einsteintoolkit.org/gallery/multipatch/index.html) **Data to upload** 1. Data is made available at [https://bitbucket.org/einsteintoolkit/www/downloads/](https://bitbucket.org… and you should see a blue “Add Files” button in the top right, when logged in with your Bitbucket account. If that is not the case contact the release manager to have you added. 2. The data file is named Kerr-Schild\_Multipole-YYYYMMDD.tar.gz and should contain the files required to reproduce the plots as well as parameter files, stdout and stderr files and the plot scripts. As of this writing this are the files `u.file_*.h5`, `x.file_*.h5`, `y.file_*.h5`, `z.file_*.h5`, `Kerr-Schild_Multipole.par`, `Kerr-Schild_Multipole.out`, `Kerr-Schild_Multipole.err`, `plot.py`, `Kerr-Schild_Multipole.session`. 3. uploading the file with a browser can be troublesome and fail with no apparent error message. Instead using `curl` and bitbucket’s [REST API ](https://developer.atlassian.com/bitbucket/api/2/reference/resource/repositories/%7Bworkspace%7D/%7Brepo_slug%7D/downloads#post)can be used. 1. If you have enabled TFA for Bitbucket, then you can use an Application password with write permission to the repo. These can be created here: [https://bitbucket.org/account/settings/app-passwords/](https://bitbucket.or… 2. Then run \(replace the file name and the user name and password with the appropriate values\): ```shell curl -u YOURBITBUCKETUSERNAME:YOURBITBUCKETPASSWORD -X POST https://api.bitbucket.org/2.0/repositories/einsteintoolkit/www/downloads -F files=(a)Kerr-Schild_Multipole-YYYYMMDD.tar.gz ``` **Update the webpage** 1. clone the `www` repository to update the gallery page using: ```shell git clone git@bitbucket.org:einsteintoolkit/www.git ``` 2. update the figure files in `gallery/multipatch` with ones you created \(the `kerr_4x3.png` one is used on the ET website frontpage in the “slider” so its aspect ratio must be 4x3\). 3. indicate in `index.html` the date and your name to show when the gallery example was last run 4. update the run time estimates if possible 5. update instructions on the website if they were not clear 6. add, commit and push the changed files to the `www` repository ```shell git add gallery/multipatch/index.html gallery/multipatch/kerr.png gallery/multipatch/kerr_4x3.png git commit -m 'multipatch: update for release ET_YYYY_MM' git push ``` Please report in this ticket any issue you found ‌ -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2174/test-multi-patch-…

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#2174: Test "Multi Patch Scalar Wave Equation" example
by Roland Haas 21 Nov '24

21 Nov '24

#2174: Test "Multi Patch Scalar Wave Equation" example Reporter: Roland Haas Status: open Milestone: ET_2024_11 Version: development version Type: task Priority: major Component: EinsteinToolkit website Changes (by Roland Haas): responsible: [] (was []) assignee: Domenica Garzon Armendariz (was William Gabella) Comment (by Roland Haas): Update to indicate that @{712020:d1a3df85-d975-4103-a904-7214e64f1e72} will handle this for ET\_2024\_11 \(Cannon\). -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2174/test-multi-patch-…

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#2174: Test "Multi Patch Scalar Wave Equation" example
by Roland Haas 21 Nov '24

21 Nov '24

#2174: Test "Multi Patch Scalar Wave Equation" example Reporter: Roland Haas Status: open Milestone: ET_2024_11 Version: development version Type: task Priority: major Component: EinsteinToolkit website Changes (by Roland Haas): Before each release, check that http://einsteintoolkit.org/gallery/multipatch/index.html still works and produces correct output. **Steps**: 1. download the _development_ version of the Einstein Toolkit: ```shell curl -kLO https://raw.githubusercontent.com/gridaphobe/CRL/master/GetComponents chmod a+x GetComponents ./GetComponents https://bitbucket.org/einsteintoolkit/manifest/raw/master/einsteintoolkit.th ``` 2. download the parameter file fro the gallery example ```shell cd Cactus wget --output-document par/Kerr-Schild_Multipole.par https://bitbucket.org/llamacode/llama/raw/master/LlamaWaveToy/par/Kerr-Schi… ``` 3. compile Cactus for the system you are on \(this may require that you add a cluster allocation etc.\) ```shell ./utils/Scripts/MakeThornList --master thornlists/einsteintoolkit.th --output thornlists/Kerr-Schild_Multipole.th par/Kerr-Schild_Multipole.par ./simfactory/bin/sim setup-silent ./simfactory/bin/sim build --thornlist thornlists/Kerr-Schild_Multipole.th ``` 4. run the simulation, using number of MPI ranks similar to what is shown on the ET website, so _for example_ ```shell ./simfactory/bin/sim create-submit Kerr-Schild_Multipole --parfile par/Kerr-Schild_Multipole.par --cores 8 --num-threads 2 --walltime 0:30:00 ``` 5. on your laptop install VisIt using the precompiled executable available from its [download page](https://visit-dav.github.io/visit-website/) 6. comprehensive instructions on how to produce the images are on the [gallery page](http://einsteintoolkit.org/gallery/multipatch/index.html ) **Data to upload** 1. Data is made available at [https://bitbucket.org/einsteintoolkit/www/downloads/](https://bitbucket.org… and you should see a blue “Add Files” button in the top right, when logged in with your Bitbucket account. If that is not the case contact the release manager to have you added. 2. The data file is named Kerr-Schild\_Multipole-YYYYMMDD.tar.gz and should contain the files required to reproduce the plots as well as parameter files, stdout and stderr files and the plot scripts. As of this writing this are the files `u.file_*.h5`, `x.file_*.h5`, `y.file_*.h5`, `z.file_*.h5`, `Kerr-Schild_Multipole.par`, `Kerr-Schild_Multipole.out`, `Kerr-Schild_Multipole.err`, `plot.py`, `Kerr-Schild_Multipole.session`. 3. uploading the file with a browser can be troublesome and fail with no apparent error message. Instead using `curl` and bitbucket’s [REST API ](https://developer.atlassian.com/bitbucket/api/2/reference/resource/repositories/%7Bworkspace%7D/%7Brepo_slug%7D/downloads#post)can be used. 1. If you have enabled TFA for Bitbucket, then you can use an Application password with write permission to the repo. These can be created here: [https://bitbucket.org/account/settings/app-passwords/](https://bitbucket.or… 2. Then run \(replace the file name and the user name and password with the appropriate values\): ``` curl -u YOURBITBUCKETUSERNAME:YOURBITBUCKETPASSWORD -X POST https://api.bitbucket.org/2.0/repositories/einsteintoolkit/www/downloads -F files=(a)Kerr-Schild_Multipole-YYYYMMDD.tar.gz ``` ‌ Comment (by Roland Haas): provide detailed instructions in description -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2174/test-multi-patch-…

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#2807: Hydro_RNSID passes CFLAGS to LD
by Roland Haas 21 Nov '24

21 Nov '24

#2807: Hydro_RNSID passes CFLAGS to LD Reporter: Roland Haas Status: new Milestone: Version: Type: bug Priority: minor Component: EinsteinToolkit thorn Changes (by Roland Haas): title: Hydro_RNSID passes CFLAGS to LD (was Hydro_RNSD passes CFLAGS to LD) -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2807/hydro_rnsid-passe…

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#2830: CarpetX depends on BLOSC support in ADIOS2 but BLOSC is not in the ET
by Roland Haas 21 Nov '24

21 Nov '24

#2830: CarpetX depends on BLOSC support in ADIOS2 but BLOSC is not in the ET Reporter: Roland Haas Status: resolved Milestone: ET_2024_11 Version: Type: bug Priority: blocker Component: EinsteinToolkit thorn Changes (by Roland Haas): status: resolved (was open) -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2830/carpetx-depends-o…

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#2830: CarpetX depends on BLOSC support in ADIOS2 but BLOSC is not in the ET
by Roland Haas 15 Nov '24

15 Nov '24

#2830: CarpetX depends on BLOSC support in ADIOS2 but BLOSC is not in the ET Reporter: Roland Haas Status: open Milestone: ET_2024_11 Version: Type: bug Priority: blocker Component: EinsteinToolkit thorn Comment (by Roland Haas): Applied as git hash [0fafb866](https://github.com/EinsteinToolkit/CarpetX/commits/0fafb866de36a3… "CarpetX: disable BLOSC in runtime options if ADIOS2 does not support it" of \[CarpetX\]\([https://github.com/EinsteinToolkit/CarpetX](https://github.com/EinsteinToolkit/CarpetX) -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2830/carpetx-depends-o…

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#2830: CarpetX depends on BLOSC support in ADIOS2 but BLOSC is not in the ET
by Roland Haas 15 Nov '24

15 Nov '24

#2830: CarpetX depends on BLOSC support in ADIOS2 but BLOSC is not in the ET Reporter: Roland Haas Status: open Milestone: ET_2024_11 Version: Type: bug Priority: blocker Component: EinsteinToolkit thorn Comment (by Roland Haas): ok, I’ll add that one. If this will become dynamic anyway, then I am not too worried about ending up with a combinatorial explosion of different options. -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2830/carpetx-depends-o…

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