#1818: HDF5 configuration fails on Datura -----------------------------------+---------------------------------------- Reporter: hinder | Owner: Type: defect | Status: new Priority: blocker | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: HDF5 | -----------------------------------+---------------------------------------- With the current ET trunk, I get the following error on a clean build on Datura:
******************************************************************************** Running configuration script for thorn HDF5: Additional requested language support: Fortran ERROR: ERROR in HDF5 configuration: ERROR: H5pubconf.h not found in
The build then hangs at that point with no further output. This may be related to the recent changes to the HDF5 thorn to factor out common code in external libraries. The error message is one issue, the hanging build is another I think.
#1818: HDF5 configuration fails on Datura ------------------------------------+--------------------------------------- Reporter: hinder | Owner: Type: defect | Status: confirmed Priority: blocker | Milestone: Component: EinsteinToolkit thorn | Version: development version Resolution: | Keywords: HDF5 ------------------------------------+--------------------------------------- Changes (by hinder):
* status: new => confirmed
#1818: HDF5 configuration fails on Datura ------------------------------------+--------------------------------------- Reporter: hinder | Owner: Type: defect | Status: confirmed Priority: blocker | Milestone: Component: EinsteinToolkit thorn | Version: development version Resolution: | Keywords: HDF5 ------------------------------------+---------------------------------------
Comment (by hinder):
Reverting commit {{{ commit acb70868fc967ed0f0a09fccc11400f4bb3dbaa0 Author: knarf knarf@fb53df36-e548-4a1e-8150-ab98cbd5e786 Date: Tue Oct 13 14:53:26 2015 +0000
another attempt on using some unified bash helper functions. Tested on debian, mike and stampede
git-svn-id: https://svn.cactuscode.org/projects/ExternalLibraries/HDF5/trunk@118 fb53df36-e548-4a1e-8150-ab98cbd5e786 }}}
in the HDF5 thorn allows the configuration to proceed.
#1818: HDF5 configuration fails on Datura ------------------------------------+--------------------------------------- Reporter: hinder | Owner: Type: defect | Status: confirmed Priority: blocker | Milestone: Component: EinsteinToolkit thorn | Version: development version Resolution: | Keywords: HDF5 ------------------------------------+---------------------------------------
Comment (by knarf):
I don't have access to Datura. Do you have a little more information? Could you run detect.sh by hand, defining CCTK_HOME beforehand?
#1818: HDF5 configuration fails on Datura ------------------------------------+--------------------------------------- Reporter: hinder | Owner: Type: defect | Status: confirmed Priority: blocker | Milestone: Component: EinsteinToolkit thorn | Version: development version Resolution: | Keywords: HDF5 ------------------------------------+---------------------------------------
Comment (by knarf):
I committed a change that should fix the hang. In another commit I try to fix the code finding the includes for a library location specified with HDF5_DIR.
#1818: HDF5 configuration fails on Datura ------------------------------------+--------------------------------------- Reporter: hinder | Owner: Type: defect | Status: confirmed Priority: blocker | Milestone: Component: EinsteinToolkit thorn | Version: development version Resolution: | Keywords: HDF5 ------------------------------------+---------------------------------------
Comment (by knarf):
In another commit I try to fix the code finding the includes for a library location specified with HDF5_DIR. It might find the library now, depending on how the hdf5 installation was done (can't look myself, but the old code didn't look at all, which was a bug).
#1818: HDF5 configuration fails on Datura ------------------------------------+--------------------------------------- Reporter: hinder | Owner: Type: defect | Status: closed Priority: blocker | Milestone: Component: EinsteinToolkit thorn | Version: development version Resolution: fixed | Keywords: HDF5 ------------------------------------+--------------------------------------- Changes (by knarf):
* status: confirmed => closed * resolution: => fixed
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