Trac January 2011

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[Einstein Toolkit] #127: Restarts should have hard link to executable
by Einstein Toolkit 08 Mar '11

08 Mar '11

#127: Restarts should have hard link to executable ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: defect | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- Restarts should contain a copy of the executable, so that they are self- contained. This "copy" should be implemented via a hard link if possible (to save space). -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/127> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #125: Old SImFactory web page should have a link to the new one
by Einstein Toolkit 08 Mar '11

08 Mar '11

#125: Old SImFactory web page should have a link to the new one -------------------------+-------------------------------------------------- Reporter: hinder | Owner: mthomas Type: enhancement | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | -------------------------+-------------------------------------------------- The web page at http://www.cct.lsu.edu/~eschnett/SimFactory/ should have a link to the simfactory.org website. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/125> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #77: Strange error message
by Einstein Toolkit 08 Mar '11

08 Mar '11

#77: Strange error message ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: defect | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- I received the following error message from SimFactory: $ ./simfactory/sim sync mars Traceback (most recent call last): File "./simfactory/sim", line 158, in <module> SimEnvironment.initApp(usageString=buildUsageString(), optionGroups=optionGroups) File "/Users/eschnett/EinsteinToolkit-hg/simfactory/lib/simenv.py", line 71, in initApp self.LoadConfigurationDatabase() File "/Users/eschnett/EinsteinToolkit-hg/simfactory/lib/simenv.py", line 131, in LoadConfigurationDatabase self.ConfigurationDatabase.Load() File "/Users/eschnett/EinsteinToolkit-hg/simfactory/lib/simdb.py", line 78, in Load self.CheckSyntax() File "/Users/eschnett/EinsteinToolkit-hg/simfactory/lib/simdb.py", line 109, in CheckSyntax syntaxChecker.SyntaxCheck() File "/Users/eschnett/EinsteinToolkit-hg/simfactory/lib/pyini.py", line 357, in SyntaxCheck self.SyntaxError("required key %s in section %s is missing" % (skey, ini_section)) File "/Users/eschnett/EinsteinToolkit-hg/simfactory/lib/pyini.py", line 418, in SyntaxError dprint("Syntax error: %s" % (error)) File "/Users/eschnett/EinsteinToolkit-hg/simfactory/lib/libutil.py", line 22, in dprint lib = env.SimLib AttributeError: SimEnvironment instance has no attribute 'SimLib' I assume I have an error in my local mdb for a machine called "Mars"; however, I don't see what key is missing or what error I have. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/77> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #205: Running on Requin fails
by Einstein Toolkit 08 Mar '11

08 Mar '11

#205: Running on Requin fails ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: defect | Status: new Priority: critical | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- Running on Requin on Sharcnet fails. The simulation is apparently created and submitted fine, but when the run command executes the simulation is inactive (!). I assume it either was not activated during submission (which it should have), or it was inactivated by a cleanup command in the mean time (which should not have happened, and which did not leave a log trail.) I attach the screen output from remotely creating and submitting the simulation, and also the simfactory log file from Requin.n -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/205> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #100: ExternalLibraries/HDF5/HDF5.sh fails to catch a missing library file in user implementation
by Einstein Toolkit 08 Mar '11

08 Mar '11

#100: ExternalLibraries/HDF5/HDF5.sh fails to catch a missing library file in user implementation ------------------------------------+--------------------------------------- Reporter: bmundim | Owner: Type: defect | Status: new Priority: major | Milestone: Component: Other | Version: Keywords: ExternalLibraries HDF5 | ------------------------------------+--------------------------------------- When the user sets for example both HDF5=yes HDF5_DIR=/usr the script HDF5.sh fails to assert if all library files are currently present in the user HDF5 implementation, what leads later on to a linking error, halting then the executable building process. Some library files are missing in the HDF5 version shipped by the Ubuntu distro, for example: libhdf5_hl_cpp.a Shouldn't the script output an warning message, and allow linking without this option, since this is not a core library file? -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/100> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #155: SimFactory tutorial does not say how to download GetComponents
by Einstein Toolkit 08 Mar '11

08 Mar '11

#155: SimFactory tutorial does not say how to download GetComponents ------------------------+--------------------------------------------------- Reporter: hinder | Owner: mthomas Type: defect | Status: new Priority: major | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- The page http://docs.einsteintoolkit.org/et-docs/Pysim_Tutorial_for_New_Users assumes that you have GetComponents already. I suggest to copy the relevant text from the cactuscode.org/download page. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/155> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #236: GetComponents should abort on undefined variables
by Einstein Toolkit 19 Feb '11

19 Feb '11

#236: GetComponents should abort on undefined variables -------------------------------------+-------------------------------------- Reporter: knarf | Owner: Type: defect | Status: new Priority: minor | Milestone: Component: EinsteinToolkit website | Version: Keywords: | -------------------------------------+-------------------------------------- Hi, I just combined two thornlists and "lost" (forgot) the definition of $ARR in the process. GetComponents used this thornlist and started to checkout stuff, into the current directory. It should probably abort in the case of undefined (but used) variables, shouldn't it? Could this lead to problems? -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/236> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #212: Rate-limit cleanups
by Einstein Toolkit 18 Feb '11

18 Feb '11

#212: Rate-limit cleanups ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: defect | Status: new Priority: major | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- Simfactory performs a cleanup each time certain operations are executed. This can slow down simfactory significantly, in particular when many operations are performed successively. There should be a rate limiter for cleanups. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/212> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #211: Unexpected output before "sync"
by Einstein Toolkit 11 Feb '11

11 Feb '11

#211: Unexpected output before "sync" ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: defect | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- When I run "sim sync numrel02", I see unexpected output before sim starts. I refer to the lines stating "executing command: /bin/bash ps". These lines should probably not be output. $ ./bin/sim sync numrel02 DEBUG: Simfactory command: ./bin/../simfactory/lib/sim.py "sync" "numrel02" DEBUG: Version 1125:1135 The Simulation Factory: Manage Cactus simulations Info: defs: /Users/eschnett/EinsteinToolkit-hg/simfactory/etc/defs.ini Info: defs.local: /Users/eschnett/EinsteinToolkit- hg/simfactory/etc/defs.local.ini Info: executing command: /bin/bash -c '{ { :; } && { ps 62110; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62162; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62215; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62272; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62334; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62402; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62472; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62554; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62628; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62708; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62779; }; } 2>&1' Info: executing command: /bin/bash -c '{ { :; } && { ps 62853; }; } 2>&1' Info: using machines: ['numrel02'] Info: current working directory: /Users/eschnett/EinsteinToolkit-hg Cactus Directory: /Users/eschnett/EinsteinToolkit-hg -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/211> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #149: BVec in HydroBase/interface.ccl should be an axial vector
by Einstein Toolkit 09 Feb '11

09 Feb '11

#149: BVec in HydroBase/interface.ccl should be an axial vector --------------------------------------------+------------------------------- Reporter: roland.haas@… | Type: defect Status: new | Priority: major Milestone: | Component: Cactus Version: | Keywords: --------------------------------------------+------------------------------- the magnetic field is a pseudovector so should have tensorparity=-1 in interface.ccl. CCTK_REAL Bvec[3] type = GF Timelevels = 3 tags='ProlongationParameter="HydroBase::prolongation_type" tensortypealias="U" tensorparity=-1 interpolator="matter"' "Magnetic field components B^i" Parities are used by the Reflection thorn. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/149> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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Trac January 2011