Trac November 2014

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159 discussions

[Einstein Toolkit] #1338: Rename Carpet output files
by Einstein Toolkit 25 Nov '14

25 Nov '14

#1338: Rename Carpet output files ----------------------+----------------------------------------------------- Reporter: eschnett | Owner: eschnett Type: defect | Status: new Priority: major | Milestone: Component: Carpet | Version: Keywords: | ----------------------+----------------------------------------------------- Windows does not allow colons in file names. Output files produced by Carpet's should therefore not use colons. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1338> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1537: Deprecate complex number functions
by Einstein Toolkit 25 Nov '14

25 Nov '14

#1537: Deprecate complex number functions -------------------------+-------------------------------------------------- Reporter: eschnett | Owner: Type: enhancement | Status: new Priority: minor | Milestone: ET_2014_11 Component: Cactus | Version: development version Keywords: | -------------------------+-------------------------------------------------- The complex number functions in Cactus are not necessary any more since all languages (Fortran, C, C++) have built-in support that should rather be used. These functions should be marked "deprecated" in the documentation (but not removed). -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1537> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1642: GRHydro should not depend on ADMMacros
by Einstein Toolkit 24 Nov '14

24 Nov '14

#1642: GRHydro should not depend on ADMMacros --------------------+------------------------------------------------------- Reporter: knarf | Owner: Type: defect | Status: new Priority: major | Milestone: ET_2014_11 Component: Other | Version: development version Keywords: | --------------------+------------------------------------------------------- At the moment GRHydro uses ADMMacros::spatial_order to decide about how to calculate the source terms. ADMMacros is deprecated. There should be another mechanism to do this, and the dependence should be removed. Note that even the C++ code uses this parameter. The simplest solution would probably be a GRHydro parameter, and this is what I suggest (sources_spatial_order). -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1642> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1701: GetComponents is not asking for authentication any more
by Einstein Toolkit 18 Nov '14

18 Nov '14

#1701: GetComponents is not asking for authentication any more ---------------------------+------------------------------------------------ Reporter: eschnett | Owner: eric9 Type: defect | Status: new Priority: major | Milestone: Component: GetComponents | Version: development version Keywords: | ---------------------------+------------------------------------------------ I just tried to download some private repositories via GetComponents. This fails, suggesting to use the svn option "--force-interactive option". Downloading these repositories manually works fine. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1701> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1687: add MPI_INC_DIRS and MPI_LIB_DIRS to HDF5_XXX_DIRS
by Einstein Toolkit 12 Nov '14

12 Nov '14

#1687: add MPI_INC_DIRS and MPI_LIB_DIRS to HDF5_XXX_DIRS -----------------------------------+---------------------------------------- Reporter: rhaas | Owner: Type: defect | Status: new Priority: major | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: | -----------------------------------+---------------------------------------- When using parallel HDF5 then hdf5 depends on MPI and hdf5.h includes mpi.h as well as libhdf5 linking to mpi routines. The proposed patch adds MPI_INC_DIRS and MPI_LIB_DIRS to the corresponding variables of HDF5. This is the same as what is already done for zlib which is also a prerequisite of HDF5. Tested to compile Cactus and utilities on stampede with and without parallel hdf5. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1687> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1699: Don't disable NoExcision on Hydra any more
by Einstein Toolkit 11 Nov '14

11 Nov '14

#1699: Don't disable NoExcision on Hydra any more ----------------------+----------------------------------------------------- Reporter: eschnett | Owner: Type: defect | Status: new Priority: major | Milestone: Component: Other | Version: development version Keywords: | ----------------------+----------------------------------------------------- -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1699> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1695: Kranc-generated thorns should be regenerated before the ET_2014_11 release
by Einstein Toolkit 11 Nov '14

11 Nov '14

#1695: Kranc-generated thorns should be regenerated before the ET_2014_11 release --------------------+------------------------------------------------------- Reporter: hinder | Owner: Type: task | Status: new Priority: major | Milestone: ET_2014_11 Component: Other | Version: development version Keywords: | --------------------+------------------------------------------------------- Kranc-generated thorns should be regenerated with the current version of Kranc before the ET_2014_11 release. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1695> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1696: ET parameter files should not activate BLAS, LAPACK or OpenBLAS directly
by Einstein Toolkit 10 Nov '14

10 Nov '14

#1696: ET parameter files should not activate BLAS, LAPACK or OpenBLAS directly -----------------------------------+---------------------------------------- Reporter: hinder | Owner: Type: defect | Status: new Priority: major | Milestone: ET_2014_11 Component: EinsteinToolkit thorn | Version: development version Keywords: | -----------------------------------+---------------------------------------- The choice of whether to use BLAS/LAPACK or OpenBLAS is now made by simfactory, but many ET-provided parameter files still activate them directly. This means that these parameter files will not work on machines where OpenBLAS is preferred (e.g. Datura). The activations can be removed entirely, as Cactus will automatically activate either BLAS and LAPACK, or OpenBLAS, depending on which are compiled into a configuration. {{{ $ find . -name "*.par"|xargs grep -rn 'BLAS\|LAPACK' ./arrangements/CactusNumerical/InterpToArray/par/qc0-interpolate.par:30:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinAnalysis/Extract/test/qc0-mclachlan/qc0-mclachlan.par:19:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinAnalysis/Extract/test/qc0-mclachlan.par:20:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinEvolve/GRHydro_InitData/par/bondi-punc- iso.par:46:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinEvolve/GRHydro_InitData/par/bondi- punc.par:46:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinEvolve/GRHydro_InitData/par/bondi- punc2.par:46:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinEvolve/GRHydro_InitData/par/bondi_sp.par:50:ActiveThorns = "BLAS LAPACK GSL" ./arrangements/EinsteinEvolve/GRHydro_InitData/par/bondiM.par:52:ActiveThorns = "BLAS LAPACK GSL" ./arrangements/EinsteinEvolve/GRHydro_InitData/par/MagTOVstar.par:47:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinEvolve/GRHydro_InitData/par/TOVstar.par:47:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/bbh/bbh.par:19:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/bbh/BBHHigherRes.par:44:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/bbh/BBHHighRes.par:44:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/bbh/BBHLowRes.par:44:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/bbh/BBHMedHRes.par:44:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/bbh/BBHMedRes.par:44:ActiveThorns = "BLAS LAPACK GSL HDF5" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/cosmology/gowdy.par:90:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/cosmology/kasner- hi.par:91:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/cosmology/kasner- med.par:91:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/cosmology/kasner- vhi.par:91:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/arXiv:1111.3344/cosmology/kasner.par:91:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/qc0-mclachlan- commspeed.par:19:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/qc0-mclachlan-i3t.par:19:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/qc0-mclachlan.par:19:ActiveThorns = "BLAS LAPACK" ./arrangements/EinsteinExamples/par/qc0_rec_1.par:19:#ActiveThorns = "BLAS LAPACK" ./arrangements/PITTNullCode/SphericalHarmonicDecomp/par/qc0-mclachlan- CCE_Cauchy.par:30:ActiveThorns = "BLAS LAPACK" ./repos/carpet/Carpet/test/kasner.par:87:ActiveThorns = "BLAS LAPACK" ./repos/carpet/Carpet/test/kasner_amr.par:95:ActiveThorns = "BLAS LAPACK" ./repos/carpet/CarpetReduce/test/periodic_weight.par:80:ActiveThorns = "BLAS LAPACK" ./repos/McLachlan/par/qc0-mclachlan.par:30:ActiveThorns = "BLAS LAPACK" ./simfactory/etc/parfiles/qc0-mclachlan.par:27:ActiveThorns = "BLAS LAPACK" }}} -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1696> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1555: Simfactory: intel optionlists with rdynamic option
by Einstein Toolkit 10 Nov '14

10 Nov '14

#1555: Simfactory: intel optionlists with rdynamic option -------------------------+-------------------------------------------------- Reporter: bmundim | Owner: eschnett Type: enhancement | Status: new Priority: minor | Milestone: ET_2014_05 Component: SimFactory | Version: development version Keywords: | -------------------------+-------------------------------------------------- Hi, While reviewing some options in my config file I noticed that the -rdynamic gcc option for the linker is applied also to the intel compiler option lists in symfactory. However there seems to have no such an option when using icc or icpc. Wouldn't be better then to pass this option as --export-dynamic directly to the linker ld instead? Maybe as follows: LDFLAGS = -Wl,--export-dynamic -Wl,-rpath,/path/to/whatever instead of LDFLAGS = -rdynamic -Wl,-rpath,/path/to/whatever Thanks, Bruno. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1555> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1490: ExternalLibraries/PAPI contains testsuite, but no data
by Einstein Toolkit 10 Nov '14

10 Nov '14

#1490: ExternalLibraries/PAPI contains testsuite, but no data -----------------------------------+---------------------------------------- Reporter: knarf | Owner: Type: defect | Status: new Priority: minor | Milestone: ET_2014_05 Component: EinsteinToolkit thorn | Version: development version Keywords: | -----------------------------------+---------------------------------------- ExternalLibraries/PAPI contains testsuite, but no data. This means the testsuite mechanism (currently) will count it always as succeeding, which is not helpful. Also, it contains a README file which only says that this directory is empty - which is not only not helpful, but also wrong, given that there is this README inside.. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1490> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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Trac November 2014